Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12840
- Subject:
- NM_001355024.2
- Aligned Length:
- 1692
- Identities:
- 878
- Gaps:
- 813
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATAAACACAGGAACTCAAATGGATTTAGAGGTTAAAGGAGTTGCTGCCACTTCTAGGAGCCAAATTCAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTCTTTGGAAGAAAGAAGCCTCTACAACAAAGGTGGACTTCTGAGTCATGGACAAACCAGAATTCTTGCCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGTGGTCCCACGACTTGATTTGGGAAGCCTTGTTGACTCTGATGATGAGGATCAGAACATAATACCTGAAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCCAGCACCAACAGACAAATGTAAACTAAAATATCAGCAATGTAAAACTGAAATTAAAGAGGGCTATAAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTATAGTCAGAGAAATGCAGAAAATACAAAATCAAATGTTACACATAAACAGTCTCCAAGAAACAAGATAGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAAAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAGAA 518
Query 1 ----------------------------ATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAA 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAAGAAACAGATTGTTGCAGAGCAAGTGATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAA 592
Query 47 ATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAA 666
Query 121 AGAACACTACATGAAACAAAGATAAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTT 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGAACACTACATGAAACAAAGATAAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTT 740
Query 195 TGATGGTAGGATCGTATCAC------------------------------------------------------ 214
||||||||||||||||||||
Sbjct 741 TGATGGTAGGATCGTATCACGTAATGGACGTGATGCTTGCAGAGAGCTCATTGGGTTCTTTTTCACTCATGACC 814
Query 215 ------------------------------------------GAACAAATGTGCTTCCTTTTATTCAAAAAAGC 246
||||||||||||||||||||||||||||||||
Sbjct 815 AATCCCTTACAATTTATGAATATCGACAATTTGGGAAAAATAGAACAAATGTGCTTCCTTTTATTCAAAAAAGC 888
Query 247 ATTTATAGTCATCAGTGTGGACGAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTT 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATTTATAGTCATCAGTGTGGACGAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTT 962
Query 321 GACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCA 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCA 1036
Query 395 CAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAA 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAA 1110
Query 469 GAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCG 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCG 1184
Query 543 TATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATT 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATT 1258
Query 617 TTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAAT 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAAT 1332
Query 691 GACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAA 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAA 1406
Query 765 ATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAA 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAA 1480
Query 839 AATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGT--------------------------------- 879
||||||||||||||||||||||||||||||||||||||||.
Sbjct 1481 AATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGCCATTCAACAGAGGAAGAAATCAAATCATCCTTT 1554
Query 880 -------------------------------------------------------------------------- 879
Sbjct 1555 CTAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAAGATTACTATGAAGG 1628
Query 880 ---------------------------------------------------------------- 879
Sbjct 1629 TTTAAGTATAGGAATAGTAGATGATGAAGACTTTGTTAACATCTTACGTACTCCATGGGGGATT 1692
