Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12840
• Subject: XM_011538888.1
• Aligned Length: 1527
• Identities: 878
• Gaps: 648

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTCTGACAAACTAAAGAAAGACTTGTGTTACGATCAGAACATAATACCTGAAAATTTGCCAGCACCAACAGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAAATGTAAACTAAAATATCAGCAATGTAAAACTGAAATTAAAGAGGGCTATAAGCAGTATAGTCAGAGAAATG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGAAAATACAAAATCAAATGTTACACATAAACAGTCTCCAAGAAACAAGATAGATGAAAAGTGTGTGCAAGAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCAAGGTTATGCAGACAACTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAGAAGAAGAAACAGATTGTTG  370

Query    1  -----------ATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAA  63
                       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CAGAGCAAGTGATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAA  444

Query   64  AAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAAC  137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAAC  518

Query  138  AAAGATAAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTTTGATGGTAGGATCGTAT  211
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAAGATAAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTTTGATGGTAGGATCGTAT  592

Query  212  CAC-----------------------------------------------------------------------  214
            |||                                                                       
Sbjct  593  CACGTAATGGACGTGATGCTTGCAGAGAGCTCATTGGGTTCTTTTTCACTCATGACCAATCCCTTACAATTTAT  666

Query  215  -------------------------GAACAAATGTGCTTCCTTTTATTCAAAAAAGCATTTATAGTCATCAGTG  263
                                     |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAATATCGACAATTTGGGAAAAATAGAACAAATGTGCTTCCTTTTATTCAAAAAAGCATTTATAGTCATCAGTG  740

Query  264  TGGACGAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTTGACATTTTTGAGTTCTG  337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGGACGAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTTGACATTTTTGAGTTCTG  814

Query  338  ATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATA  411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATA  888

Query  412  GCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCT  485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCT  962

Query  486  GGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGG  559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGG  1036

Query  560  GAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAA  633
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAA  1110

Query  634  GTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAA  707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAA  1184

Query  708  GGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGG  781
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGG  1258

Query  782  CCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAG  855
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAG  1332

Query  856  AAGCATTCTCAAGTAATTTCAGGT--------------------------------------------------  879
            |||||||||||||||||||||||.                                                  
Sbjct 1333  AAGCATTCTCAAGTAATTTCAGGCCATTCAACAGAGGAAGAAATCAAATCATCCTTTCTAGAAACATTAAAAGT  1406

Query  880  --------------------------------------------------------------------------  879
                                                                                      
Sbjct 1407  TGCCTGCAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAAGATTACTATGAAGGTTTAAGTATAGGAATAG  1480

Query  880  -----------------------------------------------  879
                                                           
Sbjct 1481  TAGATGATGAAGACTTTGTTAACATCTTACGTACTCCATGGGGGATT  1527