Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12840
- Subject:
- XM_011538890.1
- Aligned Length:
- 1672
- Identities:
- 508
- Gaps:
- 1163
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGAATTCCTTCTGCTACACTGCAGTATACTGCATGATAAACACAGGAACTCAAATGGATTTAGAGGTTAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGAGTTGCTGCCACTTCTAGGAGCCAAATTCAGCCATTCTTTGGAAGAAAGAAGCCTCTACAACAAAGGTGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTCTGAGTCATGGACAAACCAGAATTCTTGCCCACCAGTGGTCCCACGACTTGATTTGGGAAGCCTTGTTGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCTGATGATGAGGACAATTTTTCATATATTCCACTTAGTACAGCAAACCTGCCAAATTCATCTTCTACTCTTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGGGTCACACCATGTCAAACTCCATATACTCAGTATCATCTAAATAAATTGGATCAGAACATAATACCTGAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTTGCCAGCACCAACAGACAAATGTAAACTAAAATATCAGCAATGTAAAACTGAAATTAAAGAGGGCTATAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGTATAGTCAGAGAAATGCAGAAAATACAAAATCAAATGTTACACATAAACAGTCTCCAAGAAACAAGATAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAAAAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAG 666
Query 1 ------------------------------ATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCA 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGAAGAAACAGATTGTTGCAGAGCAAGTGATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCA 740
Query 45 AAATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAA 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAA 814
Query 119 AAAGAACACTACATGAAACAAAGATAAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATTACAG 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAAGAACACTACATGAAACAAAGATAAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATTACAG 888
Query 193 TTTGATGGTAGGATCGTATCAC---------------------------------------------------- 214
||||||||||||||||||||||
Sbjct 889 TTTGATGGTAGGATCGTATCACGTAATGGACGTGATGCTTGCAGAGAGCTCATTGGGTTCTTTTTCACTCATGA 962
Query 215 --------------------------------------------GAACAAATGTGCTTCCTTTTATTCAAAAAA 244
||||||||||||||||||||||||||||||
Sbjct 963 CCAATCCCTTACAATTTATGAATATCGACAATTTGGGAAAAATAGAACAAATGTGCTTCCTTTTATTCAAAAAA 1036
Query 245 GCATTTATAGTCATCAGTGTGGACGAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGCAACC 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCATTTATAGTCATCAGTGTGGACGAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGCAACC 1110
Query 319 TTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAAT 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAAT 1184
Query 393 CACAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTC 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CACAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTC 1258
Query 467 AAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAA-GATGTGCTAAAAGAAAAACTACATAAAAGAGGTGT 539
|||||||||||||||||||||||||||||||||||||| |||.|
Sbjct 1259 AAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGGATTT------------------------------ 1302
Query 540 TCGTATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAG 613
Sbjct 1303 -------------------------------------------------------------------------- 1302
Query 614 ATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTG 687
Sbjct 1303 -------------------------------------------------------------------------- 1302
Query 688 AATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAG 761
Sbjct 1303 -------------------------------------------------------------------------- 1302
Query 762 GAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAA 835
Sbjct 1303 -------------------------------------------------------------------------- 1302
Query 836 GAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGT 879
Sbjct 1303 -------------------------------------------- 1302
