Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12840
- Subject:
- XM_024449226.1
- Aligned Length:
- 1698
- Identities:
- 878
- Gaps:
- 819
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGACAAACCAGAATTCTTGCCCACCAGTATTATGTCTTTCAGGGTCCCACGACTTGATTTGGGAAGCCTTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGACTCTGATGATGAGGACAATTTTTCATATATTCCACTTAGTACAGCAAACCTGCCAAATTCATCTTCTACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGGCTGGGTCACACCATGTCAAACTCCATATACTCAGTATCATCTAAATAAATTGGATCAGAACATAATACCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAAATTTGCCAGCACCAACAGACAAATGTAAACTAAAATATCAGCAATGTAAAACTGAAATTAAAGAGGGCTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAAGCAGTATAGTCAGAGAAATGCAGAAAATACAAAATCAAATGTTACACATAAACAGTCTCCAAGAAACAAGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAGCCATCTTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGAAATTGTGGCTGC 518
Query 1 ----------------------------------ATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAG 40
||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGAGAAGAAGAAACAGATTGTTGCAGAGCAAGTGATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAG 592
Query 41 AGCAAAATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTT 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGCAAAATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTT 666
Query 115 AGAAAAAGAACACTACATGAAACAAAGATAAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATT 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGAAAAAGAACACTACATGAAACAAAGATAAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATT 740
Query 189 ACAGTTTGATGGTAGGATCGTATCAC------------------------------------------------ 214
||||||||||||||||||||||||||
Sbjct 741 ACAGTTTGATGGTAGGATCGTATCACGTAATGGACGTGATGCTTGCAGAGAGCTCATTGGGTTCTTTTTCACTC 814
Query 215 ------------------------------------------------GAACAAATGTGCTTCCTTTTATTCAA 240
||||||||||||||||||||||||||
Sbjct 815 ATGACCAATCCCTTACAATTTATGAATATCGACAATTTGGGAAAAATAGAACAAATGTGCTTCCTTTTATTCAA 888
Query 241 AAAAGCATTTATAGTCATCAGTGTGGACGAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGC 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAAAGCATTTATAGTCATCAGTGTGGACGAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGC 962
Query 315 AACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCC 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCC 1036
Query 389 GAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATC 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATC 1110
Query 463 ATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGG 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGG 1184
Query 537 TGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGG 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGG 1258
Query 611 CAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATT 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATT 1332
Query 685 CTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATA 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATA 1406
Query 759 CAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACA 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACA 1480
Query 833 TAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGT--------------------------- 879
||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1481 TAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGCCATTCAACAGAGGAAGAAATCAAATCA 1554
Query 880 -------------------------------------------------------------------------- 879
Sbjct 1555 TCCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAAGATTACTA 1628
Query 880 ---------------------------------------------------------------------- 879
Sbjct 1629 TGAAGGTTTAAGTATAGGAATAGTAGATGATGAAGACTTTGTTAACATCTTACGTACTCCATGGGGGATT 1698
