Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12859
Subject:
NR_152603.1
Aligned Length:
2982
Identities:
905
Gaps:
1969

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCGGCGACCGGAGGCGCGCGGACAGGCAAGGAGACCGCGGCCGGGGTCGTGTCAGGAATCCGCCTGACCTAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AATTGCTAGCCTTGTTTGCTTGTCCCTCTGAGGACTCCCTGCTTGCTTGCTTTTTTTTCCTTAAGGGGAAGGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGCGTAAGGAAGGAATGGCCAGTGTACTGACTGGACGCCAACTGGGACATTTCTGACGTGGGGAGCACAGTAGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AATTCTATTTTAATTCCGTCGCGGCTTTAGGTTGAGTTTGCTTCTGAAAGCTCCCCCTCGCTTAATTGACCTGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGGTTTGGCAGATTTTGGCTGAATTGAAATGTGTTAGTTTGACCTGCTTCAGGTCCTTTCTCTCCACCGTCGCA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCCCCCACCCCCGCTCCTCCTTTCTTTTTTCTTTTTCTTTTTTTCTTTTCTTTTTTTCGAGGAAACGTTCTCCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCCCTGCTCAGGATGGGCGTTTTGAAGACCTGTGTACTTAGAAGAAGTGCTTGTGCCGCCGCCTGCTTCTGGAG  518

Query    1  ----------------------------------------------------------------ATGCCTGCTT  10
                                                                            |||||.||||
Sbjct  519  AAGGACAGTTATCCCAAAGCCACCATTTAGAGGCATTAGTACTACGTCTGCGAGGAGCACTGTCATGCCCGCTT  592

Query   11  GGGTGATAGATAAATATGGGAAGAATGAAGTGCTTCGATTCACTCAGAACATGATGATGCCTATCATACACTAT  84
            |||||||||||||||||||.|||||||||||.|||||||||||.||||||||||||.|.|||||||||||||||
Sbjct  593  GGGTGATAGATAAATATGGAAAGAATGAAGTCCTTCGATTCACCCAGAACATGATGTTACCTATCATACACTAT  666

Query   85  CCAAATGAAGTCATTGTCAAAGTTCACGCTGCCAGTGTAAATCCTATAGACGTTAATATGAGAAGTGGTTATGG  158
            |||||||||||||||.|||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct  667  CCAAATGAAGTCATTATCAAAGTCCACGCTGCCAGTGTAAATCCTATAGATGTTAATATGAGAAGTGGTTATGG  740

Query  159  AGCTACAGCTTTAAATATGAAGCGTGATCCTTTACACGTGAAAATCAAAGGAGAAGAATTTCCTCTGACTCTGG  232
            |||.|||||..|||||||||||||||||||..|.||..||||||.||||||||||||.||||||||||||||||
Sbjct  741  AGCCACAGCCCTAAATATGAAGCGTGATCCCCTGCATATGAAAACCAAAGGAGAAGAGTTTCCTCTGACTCTGG  814

Query  233  GTCGGGATGTCTCTGGCGTGGTGATGGAATGTGGGCTTGATGTGAAATACTTCAAGCCTGGAGATGAGGTCTGG  306
            ||||||||||||||||.|||||||||||.|||||||||||||||||.||.|||.||||||||||||||||||||
Sbjct  815  GTCGGGATGTCTCTGGTGTGGTGATGGAGTGTGGGCTTGATGTGAAGTATTTCCAGCCTGGAGATGAGGTCTGG  888

Query  307  GCTGCAGTTCCTCCTTGGAAACAAGGCACTCTTTCAGAGTTTGTTGTAGTCAGTGGGAATGAGGTCTCTCACAA  380
            ||||||||||||||||||||.|||||||||||.|||||.||||||||.|||||||||||||||||.||.|||||
Sbjct  889  GCTGCAGTTCCTCCTTGGAAGCAAGGCACTCTCTCAGAATTTGTTGTGGTCAGTGGGAATGAGGTTTCACACAA  962

Query  381  ACCCAAATCACTCACTCATACTCAAGCTGCCTCTTTGCCATATGTGGCTCTCACAGCCTGGTCTGCTATAAACA  454
            .||||||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||
Sbjct  963  GCCCAAATCGCTTACTCATACTCAAGCTGCCTCTTTGCCATATGTGGCTCTCACGGCCTGGTCTGCCATAAACA  1036

Query  455  AAGTTGGTGGCCTGAATGACAAGAATTGCACAGGAAAACGTGTTCTAATCTTAGGCGCTTCAGGCGGAGTTGGT  528
            |.|||||.|||||||.|||||.|||.||||..||.||.|                                   
Sbjct 1037  AGGTTGGCGGCCTGAGTGACAGGAACTGCAAGGGGAAGC-----------------------------------  1075

Query  529  ACTTTTGCTATACAGGTAATGAAAGCATGGGATGCTCATGTGACAGCAGTTTGCTCCCAAGATGCCAGTGAACT  602
                          |||||||||||||||||..||||||||||||||.||||||||..||||||||||||||||
Sbjct 1076  --------------GGTAATGAAAGCATGGGGGGCTCATGTGACAGCCGTTTGCTCGAAAGATGCCAGTGAACT  1135

Query  603  TGTAAGGAAGCTTGGTGCAGACGATGTAATTGATTACAAATCTGGAAGTGTGGAAGAGCAGTTGAAATCCTTAA  676
            |||..||||||||||.|||||.||.||.||||||||||..|..|||||||||||||||||.||||||||..|||
Sbjct 1136  TGTGCGGAAGCTTGGAGCAGATGAGGTCATTGATTACACGTTGGGAAGTGTGGAAGAGCAATTGAAATCTCTAA  1209

Query  677  AACCATTTGATTTTATCCTTGATAATGTTGGCGGATCCACTGAAACATGGGCTCCAGATTTTCTCAAGAAATGG  750
            |||..|||||.||||||||||||||.|||||.|||||.||||||||||||||||.|.|||||||||||||.|||
Sbjct 1210  AACTGTTTGACTTTATCCTTGATAACGTTGGTGGATCTACTGAAACATGGGCTCTAAATTTTCTCAAGAAGTGG  1283

Query  751  TCAGGAGCCACCTATGTGACTTTGGTGACTCCTTTCCTCCTGAACATGGACCGATTGGGCATAGCAGATGGCAT  824
            ||||||||.||||||||||||.||||||||||||||||||||||||||||||||.||||..|.||.||||||||
Sbjct 1284  TCAGGAGCTACCTATGTGACTCTGGTGACTCCTTTCCTCCTGAACATGGACCGACTGGGTGTTGCTGATGGCAT  1357

Query  825  GTTGCAGACAGGAGTCACTGTAGGTTCAAAGGCATTAAAGCATTTCTGGAAAGGAGTCCATTATCGCTGGGCAT  898
            ||||||||||||||||||.||.|||.||||||||||.||||||.|||||.|||||||||||||..|.|||||.|
Sbjct 1358  GTTGCAGACAGGAGTCACCGTGGGTACAAAGGCATTGAAGCATCTCTGGCAAGGAGTCCATTACAGATGGGCCT  1431

Query  899  TTTTCATGGCCAGTGGCCCATGTTTAGATGACATTGCAGAACTGGTGGATGCGGGAAAGATCCGGCCAGTTATT  972
            |.||||||||||||||.||||.|.|||||||.||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1432  TCTTCATGGCCAGTGGTCCATATCTAGATGAAATTGCAGAACTGGTGGATGCAGGAAAGATCCGGCCAGTTATT  1505

Query  973  GAACAAACCTTTCCTTTTTCTAAAGTTCCAGAAGCCTTCCTGAAGGTGGAAAGAGGACACGCACGAGGAAAGAC  1046
            ||.|..||.||.|||||.|||.||||.|||||||||||||||||||||||.|||||.|||||.|||||||||||
Sbjct 1506  GAGCGGACATTCCCTTTCTCTGAAGTCCCAGAAGCCTTCCTGAAGGTGGAGAGAGGCCACGCCCGAGGAAAGAC  1579

Query 1047  TGTAATTAATGTTGTT----------------------------------------------------------  1062
            |||..|||||||.|||                                                          
Sbjct 1580  TGTGGTTAATGTAGTTTAAATACATATATGGGCAAGCTGGCGGCTTGCTGCTCTCTCCTCGCCAAGTGCCTCGG  1653

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 1654  ACCCAGACATCTAGCCTTCACCACACATTCTCCCGAGTCAGATTTTAAGTTTCACTATCCATGTATAAACCTAC  1727

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 1728  TCCTGGACTGGTGAGAGCTCACAGGTAAAGTTGCGTGGCTGCCTGAGTTCAGTTCCTGGAGCCCACTCGAGGGA  1801

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 1802  GAACTGATTCCAGTACATTGTTCTCTCTCCCCCTCCCCCACTATGCACACACCTCTACAGAGATAAAGAAATGC  1875

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 1876  ATAATGCTTGTGTGGGCACATGCGCCAAGGGCACGAGAGGACATCACAGGGAACCTTCGGGAGCCAGTGCTAGC  1949

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 1950  CTTTACCCACGGAGTCATCTCACTGGCCCAATGAAAAACATTTTTAAAAATATGTGTTTTAAAAAATACTTTCA  2023

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 2024  AAATTATTTAAATTGACCTAGAGAATAGTTTCTTCATGGCAGTCTACATGTACGTTCATGGGATGTAGCCTTTT  2097

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 2098  GTGCTAATCATTTGCCAATGCTCAGTACAAAACTGTCAGCTCCTGCACTTGCCTGCAGTCAGTGGGAAGTACAT  2171

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 2172  GGTGCTTTGTTTTAATTTATTTTGATTTTGTGTCATGTGTATGGATATTTGCCTATGTGTATGTGCACCATATG  2245

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 2246  GCATGTCTTGTACCTGGGGCGCCCAGAGGTGGTTGTCAGGTCCCTTGGAACTGGAATTAACAGGTGATTGTGAG  2319

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 2320  CTGCCATGTAGGCACTGGGAATTGAACCTGGGTCCTCAGGAAGAGCAGCCAGTGTTCCTAAATGCGGAGCTGTC  2393

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 2394  TCCAGCCTCTGCACAGTGTTTTTGTTTTCATAAGCTGTGGTTTGACCCAGCTCTGTAAATTTTTGTGGCCTTTT  2467

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 2468  TGTAGCTCAAACCCCGCCATCTTATGTTAATGTCTGTGAGATTCTAAAACGGGTCAGAACCTCTCCCAAGGACC  2541

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 2542  TTCGTGTGCAGCATCACTTGTGATAATACTGGGAGGTAGCAGAACCTTACGTAGGACCTAGTGGGAGGAAGTGG  2615

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 2616  GGAGGCACTGCTGGAGGAGATACCAGGACCCAGGGCTTTCCTGCTTCTATGTCTTGATCGCCTGTAGGCAGGCC  2689

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 2690  TGAGGAGCATTCTCTTGATTGATGGTTGGTGGATGGGTCCAGCCCACTGTGGGAGGTGCCATCCCTGGGTAGGT  2763

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 2764  AGTCATGGGGTGTATAAGAAACCAAACTCAGTAAGCTAAGGGGAAGCAAGCCAGTCAGCAGCACTCCTCTGTGG  2837

Query 1063  --------------------------------------------------------------------------  1062
                                                                                      
Sbjct 2838  CCTCTGCATTAGTTCCTGCCTCCGGGTTCCTGCATTCCTTGAGTCCCTGCCCTCTATGATGTAATCTGTGAGAT  2911

Query 1063  ----------------------  1062
                                  
Sbjct 2912  GTAATAAACCCTTTCCTCCTCA  2933

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