Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12867
- Subject:
- NM_001323574.2
- Aligned Length:
- 1557
- Identities:
- 776
- Gaps:
- 765
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGAGGGGAGCCAGTCGGCGCCTGAGGCAGGCAATGATATGGGAAATGATGATGCCATTGGAGGGAATGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGCAAATATATAGTGCTTCCAACTGGCTATTGTGGACAGCCCAAGAAAGGACATCTTATCTTTGATGCTTGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGAAAGTGGTAACCTGGGCCGGGTGGACCAGGTCTCTGAGTTTGAGTATGATCTGTTCATTAGGCCGGACACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTAATCCACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAATGTGAAAGAATCACAGGTGAGGGAAATAGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGATACCTTCAGAGTGGTTTTGAGGGTCATTTTCAACATTGTTAACTTCAGTAAAACCAAGAGTCTCTATAGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGGGATGGCCCCTATGGTGAAATCTACCAGCAGACCAAAATGGCAAAGGCTGCCACCCAAAAATGTTTACTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACCGCTGCCCGGACCATAGGAAGAACTATGTGATGTCCTTTGCCTTTTGTTTTGACCGAGAAGAAGATATTTA 518
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 519 CCAGTTTGCTTACTGCTACCCATATACATACACTCGCTTCCAACATTACCTTGACAGCCTGCAAAAGAGAAACA 592
Query 2 TGGATTACTTCTTTCGGGAGCAGCTGGGCCAGAGTGTGCAACAACGAAAGCTTGACCTCCTGACGATAACCAGC 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGGATTACTTCTTTCGGGAGCAGCTGGGCCAGAGTGTGCAACAACGAAAGCTTGACCTCCTGACGATAACCAGC 666
Query 76 CCTGACAATCTCCGGGAAGGGGCAGAGCAGAAGGTGGTATTCATCACAGGACGAGTCCACCCAGGGGAAACACC 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCTGACAATCTCCGGGAAGGGGCAGAGCAGAAGGTGGTATTCATCACAGGACGAGTCCACCCAGGGGAAACACC 740
Query 150 CTCATCATTTGTGTGCCAAGGGATCATTGACTTCCTTGTAAGCCAGCACCCTATTGCCTGTGTCCTCCGGGAAT 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTCATCATTTGTGTGCCAAGGGATCATTGACTTCCTTGTAAGCCAGCACCCTATTGCCTGTGTCCTCCGGGAAT 814
Query 224 ACCTGGTCTTCAAGATCGCACCAATGCTCAATCCTGATGGAGTCTACCTGGGCAATTACAGGTGTTCTCTGATG 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACCTGGTCTTCAAGATCGCACCAATGCTCAATCCTGATGGAGTCTACCTGGGCAATTACAGGTGTTCTCTGATG 888
Query 298 GGATTTGATCTGAATCGTCACTGGCTGGATCCCTCTCCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACT 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGATTTGATCTGAATCGTCACTGGCTGGATCCCTCTCCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACT 962
Query 372 CATCGTCCAGATGTACAACGACCCAAAAACAAGCCTGGAGTTTTATATTGACATCCATGCCCACTCCACCATGA 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CATCGTCCAGATGTACAACGACCCAAAAACAAGCCTGGAGTTTTATATTGACATCCATGCCCACTCCACCATGA 1036
Query 446 TGAATGGCTTCATGTATGGCAACATCTTTGAGGATGAGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTC 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGAATGGCTTCATGTATGGCAACATCTTTGAGGATGAGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTC 1110
Query 520 CTCTGCCAGAATGCTGAGGACTTCTCCTATTCCAGCACATCCTTTAACCGGGACGCTGTGAAAGCAGGAACTGG 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTCTGCCAGAATGCTGAGGACTTCTCCTATTCCAGCACATCCTTTAACCGGGACGCTGTGAAAGCAGGAACTGG 1184
Query 594 CCGTCGCTTCCTCGGTGGACTCCTGGACCACACTTCCTATTGCTACACCCTAGAGGTCTCCTTCTACAGCTACA 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCGTCGCTTCCTCGGTGGACTCCTGGACCACACTTCCTATTGCTACACCCTAGAGGTCTCCTTCTACAGCTACA 1258
Query 668 TCATCAGTGGCACCACGGCTGCTGTGCCCTACACTGAAGAAGCCTGTAT------------------------- 716
|||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 1259 TCATCAGTGGCACCACGGCTGCTGTGCCCTACACTGAAGAAGCCTATATGAAGCTGGGGCGGAATGTGGCAAGA 1332
Query 717 -CC-----------TTAGTCCCC---ACCCAGCCTTG-----------GGCCAGCCCTCATCCAGCCGAGAGT- 763
|| ||| ||..| ||| ||.|| |||.|..|| ||| |||||||.|
Sbjct 1333 ACCTTTTTGGACTATTA-TCGGCTGAACC---CCGTGGTTGAAAAGGTGGCAATTCC-CAT---GCCGAGACTG 1398
Query 764 ------------ATCCAAGTCTGACAGGTCAGGAA---------------TTA-----------------GGCC 793
||..||||| |||...||||| ||| ||..
Sbjct 1399 CGAAATAAAGAAATAGAAGTC---CAGAGAAGGAAAGAAAAATCCCCTCCTTACAAGCACCCACTCCTGCGGGG 1469
Query 794 CCCAGCTCAGG--------------------------------------------------------------- 804
|||||| |||.
Sbjct 1470 CCCAGC-CAGCAACTACCCCAACAGCAAAGGGGACAAGAAGAGCTCAGTGAACCACAAAGACCCTTCAACCCCT 1542
Query 805 --- 804
Sbjct 1543 TTT 1545
