Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12867
- Subject:
- NM_001323575.2
- Aligned Length:
- 1493
- Identities:
- 778
- Gaps:
- 700
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGAGGGGAGCCAGTCGGCGCCTGAGGCAGGCAATGATATGGGAAATGATGATGCCATTGGAGGGAATGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGCAAATATATAGTGCTTCCAACTGGCTATTGTGGACAGCCCAAGAAAGGACATCTTATCTTTGATGCTTGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGAAAGTGGTAACCTGGGCCGGGTGGACCAGGTCTCTGAGTTTGAGTATGATCTGTTCATTAGGCCGGACACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTAATCCACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAATGTGAAAGAATCACAGAGGGTCATTTTCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATTGTTAACTTCAGTAAAACCAAGAGTCTCTATAGAGATGGGATGGCCCCTATGGTGAAATCTACCAGCAGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAAAATGGCAAAGGCTGCCACCCAAAAATGTTTACTACTACCGCTGCCCGGACCATAGGAAGAACTATGTGATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCTTTGCCTTTTGTTTTGACCGAGAAGAAGATATTTACCAGTTTGCTTACTGCTACCCATATACATACACTCG 518
Query 1 -------------------------------------ATGGATTACTTCTTTCGGGAGCAGCTGGGCCAGAGTG 37
|||||||||||||||||||||||||||||||||||||
Sbjct 519 CTTCCAACATTACCTTGACAGCCTGCAAAAGAGAAACATGGATTACTTCTTTCGGGAGCAGCTGGGCCAGAGTG 592
Query 38 TGCAACAACGAAAGCTTGACCTCCTGACGATAACCAGCCCTGACAATCTCCGGGAAGGGGCAGAGCAGAAGGTG 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGCAACAACGAAAGCTTGACCTCCTGACGATAACCAGCCCTGACAATCTCCGGGAAGGGGCAGAGCAGAAGGTG 666
Query 112 GTATTCATCACAGGACGAGTCCACCCAGGGGAAACACCCTCATCATTTGTGTGCCAAGGGATCATTGACTTCCT 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTATTCATCACAGGACGAGTCCACCCAGGGGAAACACCCTCATCATTTGTGTGCCAAGGGATCATTGACTTCCT 740
Query 186 TGTAAGCCAGCACCCTATTGCCTGTGTCCTCCGGGAATACCTGGTCTTCAAGATCGCACCAATGCTCAATCCTG 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGTAAGCCAGCACCCTATTGCCTGTGTCCTCCGGGAATACCTGGTCTTCAAGATCGCACCAATGCTCAATCCTG 814
Query 260 ATGGAGTCTACCTGGGCAATTACAGGTGTTCTCTGATGGGATTTGATCTGAATCGTCACTGGCTGGATCCCTCT 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATGGAGTCTACCTGGGCAATTACAGGTGTTCTCTGATGGGATTTGATCTGAATCGTCACTGGCTGGATCCCTCT 888
Query 334 CCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACTCATCGTCCAGATGTACAACGACCCAAAAACAAGCCT 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACTCATCGTCCAGATGTACAACGACCCAAAAACAAGCCT 962
Query 408 GGAGTTTTATATTGACATCCATGCCCACTCCACCATGATGAATGGCTTCATGTATGGCAACATCTTTGAGGATG 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGAGTTTTATATTGACATCCATGCCCACTCCACCATGATGAATGGCTTCATGTATGGCAACATCTTTGAGGATG 1036
Query 482 AGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTCCTCTGCCAGAATGCTGAGGACTTCTCCTATTCCAGC 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTCCTCTGCCAGAATGCTGAGGACTTCTCCTATTCCAGC 1110
Query 556 ACATCCTTTAACCGGGACGCTGTGAAAGCAGGAACTGGCCGTCGCTTCCTCGGTGGACTCCTGGACCACACTTC 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACATCCTTTAACCGGGACGCTGTGAAAGCAGGAACTGGCCGTCGCTTCCTCGGTGGACTCCTGGACCACACTTC 1184
Query 630 CTATTGCTACACCCTAGAGGTCTCCTTCTACAGCTACATCATCAGTGGCACCACGGCTGCTGTGCCCTACACTG 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTATTGCTACACCCTAGAGGTCTCCTTCTACAGCTACATCATCAGTGGCACCACGGCTGCTGTGCCCTACACTG 1258
Query 704 AAGAAGCCTGTAT--------------------------CC-----------TTAGTCCCC---ACCCAGCCTT 737
|||||||||.||| || ||| ||..| ||| ||.|
Sbjct 1259 AAGAAGCCTATATGAAGCTGGGGCGGAATGTGGCAAGAACCTTTTTGGACTATTA-TCGGCTGAACC---CCGT 1328
Query 738 G-----------GGCCAGCCCTCATCCAGCCGAGAGT------------ATC---------CAAG--------T 771
| |||.|..|| ||| |||||||.| ||| |||| .
Sbjct 1329 GGTTGAAAAGGTGGCAATTCC-CAT---GCCGAGACTGCGGAAAGAAAAATCCCCTCCTTACAAGCACCCACTC 1398
Query 772 CTGACAG------GTCAGGAATTAGGCCCC--CAGCTCAGG--------------------------------- 804
||| |.| |.|||.||.|| |||| ||||..|||
Sbjct 1399 CTG-CGGGGCCCAGCCAGCAACTA--CCCCAACAGCAAAGGGGACAAGAAGAGCTCAGTGAACCACAAAGACCC 1469
Query 805 ------------- 804
Sbjct 1470 TTCAACCCCTTTT 1482
