Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12929
- Subject:
- NR_158677.2
- Aligned Length:
- 5443
- Identities:
- 380
- Gaps:
- 5060
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGGCCCGGCCGACCTCGCGGGCTTGGGCCTGGGCGGGCACCGACGGAGCGGCCCTGGCTGCAGCCTCCCGGCG 74
Query 1 -------------------ATGCGGCTGCTCCTGCTCGTGCCGCTGCTGCTGGCTCCAGCGCCCGGGTCCTCGG 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCAGCGAAGACAGGCTGAGATGCGGCTGCTCCTGCTCGTGCCGCTGCTGCTGGCTCCAGCGCCCGGGTCCTCGG 148
Query 56 CTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGGACCCTGGAGCCAGTGGAGCCCCTGCAGCCGGACCTGTGGA 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGGACCCTGGAGCCAGTGGAGCCCCTGCAGCCGGACCTGTGGA 222
Query 130 GGGGGTGTCAGCTTCCGGGAGCGCCCCTGCTACTCCCAGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCCGC 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGGGTGTCAGCTTCCGGGAGCGCCCCTGCTACTCCCAGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCCGC 296
Query 204 CCGGAGCCACCGCTCTTGTCGCACGGAGAGCTGCCCCGACGGCGCCCGGGACTTCCGGGCCGAGCAGTGCGCGG 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCGGAGCCACCGCTCTTGTCGCACGGAGAGCTGCCCCGACGGCGCCCGGGACTTCCGGGCCGAGCAGTGCGCGG 370
Query 278 AGTTCGACGGAGCGGAGTTCCAGGGGCGGCGGTATCGGTGGCTGCCCTACTACAGCGCCCCAAACAAGTGTGAA 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGTTCGACGGAGCGGAGTTCCAGGGGCGGCGGTATCGGTGGCTGCCCTACTACAGCGCCCCAAACAAGTGTGAA 444
Query 352 CTGAACTGCATTCCCAAAGTGCTGGG---------ATTACAGGCA----------------------------- 387
|||||||||||||||||.| ||| |.||||.|||
Sbjct 445 CTGAACTGCATTCCCAAGG----GGGAGAACTTCTACTACAAGCACAGGGAGGCTGTGGTTGATGGGACGCCCT 514
Query 388 -------------------------------------------------------------------------- 387
Sbjct 515 GCGAGCCTGGCAAGAGGGATGTCTGTGTGGATGGCAGCTGCCGGGTTGTCGGCTGTGATCACGAGCTGGACTCG 588
Query 388 -------------------------------------------------------------------------- 387
Sbjct 589 TCCAAGCAGGAGGACAAGTGTCTGCGGTGTGGGGGTGACGGCACGACCTGCTACCCCGTCGCAGGCACCTTTGA 662
Query 388 -------------------------------------------------------------------------- 387
Sbjct 663 CGCTAATGACCTCAGCCGAGCTGTGAAGAATGTTCGTGGGGAATACTACCTCAATGGGCACTGGACCATCGAGG 736
Query 388 -------------------------------------------------------------------------- 387
Sbjct 737 CGGCCCGGGCCCTGCCAGCAGCCAGCACCATCCTGCATTACGAGCGGGGTGCTGAGGGGGACCTGGCCCCTGAG 810
Query 388 -------------------------------------------------------------------------- 387
Sbjct 811 CGACTCCATGCCCGGGGCCCCACCTCGGAGCCCCTGGTCATCGAGCTCATCAGCCAGGAGCCCAACCCCGGTGT 884
Query 388 -------------------------------------------------------------------------- 387
Sbjct 885 GCACTATGAGTACCACCTGCCCCTGCGCCGCCCCAGCCCCGGCTTCAGCTGGAGCCACGGCTCATGGAGTGACT 958
Query 388 -------------------------------------------------------------------------- 387
Sbjct 959 GCAGCGCGGAGTGTGGCGGAGGTCACCAGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCTACCCCGAC 1032
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1033 CACATGTGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGACCAAGCG 1106
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1107 CTGGAAGGCAGGGCCATGGGCACCCTGCTCAGCCTCCTGTGGAGGAGGCTCCCAGTCCCGCTCCGTGTACTGCA 1180
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1181 TCTCGTCTGACGGGGCCGGCATCCAGGAGGCCGTGGAGGAGGCTGAGTGTGCCGGGCTGCCTGGGAAGCCCCCT 1254
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1255 GCCATTCAGGCCTGTAACCTGCAGCGCTGTGCAGCCTGGAGCCCGGAGCCCTGGGGAGAGTGTTCTGTCAGTTG 1328
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1329 TGGCGTTGGCGTCCGGAAGCGGAGCGTTACTTGCCGGGGTGAAAGGGGTTCTTTGCTCCATACCGCAGCGTGCT 1402
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1403 CCTTGGAAGACCGGCCACCTCTGACTGAGCCCTGTGTGCATGAGGACTGCCCCCTCCTCAGTGACCAGGCCTGG 1476
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1477 CATGTTGGCACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGGGCACTCGGAGGCGACAGGTCATCTGTGCCAT 1550
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1551 TGGGCCGCCCAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGATGTGGAGCCTTGTAACACGCAGCCCT 1624
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1625 GTCATCTCCCCCAGGAGGTCCCCAGCATGCAGGATGTGCACACCCCTGCCAGCAACCCCTGGATGCCGTTGGGC 1698
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1699 CCTCAGGAGTCCCCTGCCTCAGACTCCAGAGGCCAGTGGTGGGCAGCCCAGGAACACCCCTCAGCCAGGGGTGA 1772
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1773 CCACAGGGGAGAACGAGGTGACCCCAGGGGCGACCAAGGCACCCACCTGTCAGCCCTGGGCCCCGCTCCCTCTC 1846
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1847 TGCAGCAGCCCCCATACCAGCAACCCCTGCGGTCGGGCTCAGGGCCCCACGACTGCAGACACAGTCCTCACGGG 1920
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1921 TGCTGCCCCGATGGCCACACGGCATCTCTCGGGCCTCAGTGGCAAGGCTGCCCTGGGGCCCCCTGTCAGCAGAG 1994
Query 388 -------------------------------------------------------------------------- 387
Sbjct 1995 CAGGTACGGGTGCTGCCCTGACAGGGTATCTGTCGCTGAGGGGCCCCATCACGCTGGCTGCACAAAGTCGTATG 2068
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2069 GTGGTGACAGCACCGGGGGCATGCCCAGGTCAAGGGCAGTGGCTTCTACAGTCCACAACACCCACCAGCCCCAG 2142
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2143 GCCCAGCAGAATGAGCCCAGTGAGTGCCGGGGCTCCCAGTTTGGCTGTTGCTATGACAACGTGGCCACTGCAGC 2216
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2217 CGGTCCTCTTGGGGAAGGCTGTGTGGGCCAGCCCAGCCATGCCTACCCCGTGCGGTGCCTGCTGCCCAGTGCCC 2290
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2291 ATGGCTCTTGCGCAGACTGGGCTGCCCGCTGGTACTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGGTAT 2364
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2365 GGCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGCTGCCAGGGATCTCTCCA 2438
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2439 TGGGCCCCGTCGTCCCCAGCCTGGGGCTTCTGGAAGGAGCACCCACACGGATGGTGGCGGCAGCAGTCCTGCAG 2512
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2513 GCGAGCAGGAACCCAGCCAGCACAGGACAGGGGCCGCGGTGCAGAGAAAGCCCTGGCCTTCTGGTGGTCTCTGG 2586
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2587 CGGCAAGACCAACAGCCTGGGCCAGGGGAGGCCCCCCACACCCAGGCCTTTGGAGAATGGCCATGGGGGCAGGA 2660
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2661 GCTTGGGTCCAGGGCCCCTGGACTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTCCACAGCTCCTCCTACA 2734
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2735 GGATTAGCTTGGCAGGTGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTCCTGCTCA 2808
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2809 GACGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGTTCACGTG 2882
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2883 ACAGCTCCCTCCACCTCCGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGC 2956
Query 388 -------------------------------------------------------------------------- 387
Sbjct 2957 AGAGGACGCGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCGCATCA 3030
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3031 TAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCTGAGCCGCTTCCCTCAGCCCAGGGACCCAGCTCAGGAC 3104
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3105 TTTGGCCAAGCGGGGGCTGCTGGGCCCCTGGGGGCCATCCCCTCTTCACACCCACAGCCTGCAAACAGGCTGCG 3178
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3179 TTTGGACCAGAACCAGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAG 3252
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3253 GCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCCTGTCTCTTCTCCCAGCACCCACCGCCCAGCC 3326
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3327 CAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGCCCAGCTTT 3400
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3401 GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCACGCTCAGCCCATCTGG 3474
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3475 CAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGATGGACTC 3548
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3549 TTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATTAGCTCTTTCAAAAACCCACCCAGT 3622
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3623 GTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACC 3696
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3697 ACAGGCTGCTGTTTTCAAGAAGAGCAATCTGTTTGGATAAGAAAAACCTTTACTTTACAGCTTCCCTTTATAAT 3770
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3771 TTGTTACACAGGAATAGTTAAATGCATTTGTTTGTTTGTTTTTTGAGACAGAGTTTCACTCTTGTTGCCCAGGC 3844
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3845 TGGAGGGCAATGGCGCGATCTCAGCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTT 3918
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3919 CTGAGTAGCTAGGATTACAGATGCCTATCACCATGCCTGGGTAATTTTTGTATTTTTAGTTGAGATGGGGTTTC 3992
Query 388 -------------------------------------------------------------------------- 387
Sbjct 3993 ACCATGTTGGCCAGGCTGGTCTCGAACTTCTGACCTCAGATGATCTGCCCGCCTCAGCCTCCCAAAGTGCTGGG 4066
Query 388 -------------------------------------------------------------------------- 387
Sbjct 4067 ATTACAGGCATGAGCCACCACGCCCAGCCATCAATGCATTTTTTTTATTTTTTTTTTGAGACAGAGTTTCGCAC 4140
Query 388 -------------------------------------------------------------------------- 387
Sbjct 4141 TTCTTGCCCAGGCTGGAGTACAATGGTGCGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGCTTC 4214
Query 388 -------------------------------------------------------------------------- 387
Sbjct 4215 TCCAGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTATGTGCCACCATGCCTGGCTAATTTTGTATTTTTAGT 4288
Query 388 -------------------------------------------------------------------------- 387
Sbjct 4289 AGAGACGGGGTTTCTCCATGTTGGTCAGACTGGTCTTGAACTCCCGACCTCAGGTAATCCGCCCGCCTCGGCCT 4362
Query 388 -------------------------------------------------------------------------- 387
Sbjct 4363 CCCAAAATGCTGGGATTAGAGGTGTGAGCCACTGTGCCCAGCCCATCAATGTGTTTTAAAGCTAGCTGTCAGGG 4436
Query 388 -------------------------------------------------------------------------- 387
Sbjct 4437 TTCCACTTAATTTAAAGCTGGGCAGGGAGATGTGTAATGATTTCAAAGTTAACACCTGTTTGTTTTCTAAAGGG 4510
Query 388 -------------------------------------------------------------------------- 387
Sbjct 4511 CATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGATGGTTCATTGCTCTAGTCTCTCTC 4584
Query 388 -------------------------------------------------------------------------- 387
Sbjct 4585 ACCCTTCTAGGCAGTGCATCAGTCAGCTCTAAATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAA 4658
Query 388 -------------------------------------------------------------------------- 387
Sbjct 4659 TGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTGCAGTTAGCACTGTTATCTGAGCATGA 4732
Query 388 -------------------------------------------------------------------------- 387
Sbjct 4733 AAGAACTGGAAACGCTCCTTACGTCGAGATGTTGGACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCT 4806
Query 388 -------------------------------------------------------------------------- 387
Sbjct 4807 GTGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCTCTCTT 4880
Query 388 -------------------------------------------------------------------------- 387
Sbjct 4881 CCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTGCCAAAGACAAATCAGACTGTCAGTCATTAAAAACAGCA 4954
Query 388 -------------------------------------------------------------------------- 387
Sbjct 4955 TTAGCAGGATGAGGATAGCAATGGGGAAGGGTTGTGGGCAATGCAGTAACAGGGAAATGGCTTCAGAAATGGTT 5028
Query 388 -------------------------------------------------------------------------- 387
Sbjct 5029 TGAGTTGGAAGACAACATTCTTCATCTCTCAGGACTTCTAATTCCTTGATGCTAAAAGAAGAGGCATGGATTCT 5102
Query 388 -------------------------------------------------------------------------- 387
Sbjct 5103 ATGAGCTTCCAAGTCCCTTTCCACTTTAACCTTCTACAAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATT 5176
Query 388 -------------------------------------------------------------------------- 387
Sbjct 5177 CCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCT 5250
Query 388 -------------------------------------------------------------------------- 387
Sbjct 5251 GGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGTCTTCTCTACTCATTCAACAAAGGAAATGTG 5324
Query 388 -------------------------------------------------------------------------- 387
Sbjct 5325 GGCTGGGGCAGAGGTCTTTTTTCATTTAATACTGGAAAAATATTGAAGAGCATCCATGTTCACTTATGGCTGGT 5398
Query 388 ----------------------------------------- 387
Sbjct 5399 TTTGCTATAGAAATTGGAAAATAAAGGCCACTTTTTTGAAA 5439
