Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12996
Subject:
XM_005271843.2
Aligned Length:
1959
Identities:
1882
Gaps:
75

Alignment

Query    1  ATGGAACTTGAAAATGATTATTGCTTGAATGATTACAACATTTCAGAAGGGTGGACCTTGAAGCTAGTTTTGGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TATGCGTGGCGGACCTATAAATACTAGAAGAGTTCCTACAGACGATCCACTTAGGACGATGGCAGAGTACTTGG  148
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct    1  -ATGCGTGGCGGACCTATAAATACTAGAAGAGTTCCTACAGACGATCCACTTAGGAAGATGGCAGAGTACTTGG  73

Query  149  ATTCCAGTCGAGTTGAGGTCTGGGAGAAGACCTCCTGCAGCAAACAAGTTACATTTTTGGTATACCAAGAAGGA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   74  ATTCCAGTCGAGTTGAGGTCTGGGAGAAGACCTCCTGCAGCAAACAAGTTACATTTTTGGTATACCAAGAAGGA  147

Query  223  GATCAATTGAATTTCTTTCCTGCAGTAGATAGGGGAGATGGCACTTTAACACCGTTATCTGACTCTTCAAAGAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  148  GATCAATTGAATTTCTTTCCTGCAGTAGATAGGGGAGATGGCACTTTAACACCGTTATCTGACTCTTCAAAGAA  221

Query  297  AATAGATTTTCATTTGCATGTCCTACGGAGAAAAGGAGAACATCGTATGAGTGGTGGTTCTATGTATAATTCAG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  222  AATAGATTTTCATTTGCATGTCCTACGGAGAAAAGGAGAACATCGTATGAGTGGTGGTTCTATGTATAATTCAG  295

Query  371  ATACAGATGAGGATGAAGAAACTGAGCCTTCTTCTTCTGGGCAACAGATAATTGAAAATTCAATAACTATGAAT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  296  ATACAGATGAGGATGAAGAAACTGAGCCTTCTTCTTCTGGGCAACAGATAATTGAAAATTCAATAACTATGAAT  369

Query  445  AAGATGAAGCTGCTGAAGGCTAAGATGAAGAACATGAATCTCAGCAAAAAGCCTAAGAAAGCTGTCAAGATAAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  370  AAGATGAAGCTGCTGAAGGCTAAGATGAAGAACATGAATCTCAGCAAAAAGCCTAAGAAAGCTGTCAAGATAAA  443

Query  519  ACCTCACCCACCTGTAGCTCCTCGACCTTCTAGTGGTTCCACTGCACCATCTCGCCACCGATTGTTAAGGGTCC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  444  ACCTCACCCACCTGTAGCTCCTCGACCTTCTAGTGGTTCCACTGCACCATCTCGCCACCGATTGTTAAGGGTCC  517

Query  593  TCCCCAACATTGGTCAATCTTGTTCACCTGCTTTTGGGAATGCATATCCGCCCGAAATCTCCAGGAATGGAATT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  518  TCCCCAACATTGGTCAATCTTGTTCACCTGCTTTTGGGAATGCATATCCGCCCGAAATCTCCAGGAATGGAATT  591

Query  667  TCAAGTTTGGCAACTCAACTCTCTGCTGAGAGATACATATCTTCTATCACTGGTGAATTTCTTAAGGAAGATAA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  592  TCAAGTTTGGCAACTCAACTCTCTGCTGAGAGATACATATCTTCTATCACTGGTGAATTTCTTAAGGAAGATAA  665

Query  741  TAGCTGGGAGAATAACACACTGTCTCACTTCAGTAGCAACGTCAAACTACCTCCTCAGATACCCCATTTGGAGT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  666  TAGCTGGGAGAATAACACACTGTCTCACTTCAGTAGCAACGTCAAACTACCTCCTCAGATACCCCATTTGGAGT  739

Query  815  TGGGAAATGACCAGGAGCTTGCTGACTCTGTTCTCCATCTTGGATCATCCCTGCCTAGGCAAACAAAACATTTT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  740  TGGGAAATGACCAGGAGCTTGCTGACTCTGTTCTCCATCTTGGATCATCCCTGCCTAGGCAAACAAAACATTTT  813

Query  889  TTAGGAAACTTGCCATCTAGTAATGGGAACATTGTCTTACCTTCAGAAGAATGTGTAACCGAACAATCACTTCT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  814  TTAGGAAACTTGCCATCTAGTAATGGGAACATTGTCTTACCTTCAGAAGAATGTGTAACCGAACAATCACTTCT  887

Query  963  ACCTAAAGTGGGCTCACTGGCTTCATTTGCAGAAGGAAATGCTGATGAACAGAGCAGCGGCTTAGAAGGTGCGT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  888  ACCTAAAGTGGGCTCACTGGCTTCATTTGCAGAAGGAAATGCTGATGAACAGAGCAGCGGCTTAGAAGGTGCGT  961

Query 1037  GCAAAGTGAATCTGGAGTTGCTACTCACTAATGCTGACAAAGGGTTGAAAGCTCCAGAGCAGCATCTCAAGCAT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  962  GCAAAGTGAATCTGGAGTTGCTACTCACTAATGCTGACAAAGGGTTGAAAGCTCCAGAGCAGCATCTCAAGCAT  1035

Query 1111  GTTGCAGGAGTGCTGAATGGGGAATCAGTAGAGACTTCAGTTCTTAACTACCGGGAATTAAGTCCTCACAAGAA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036  GTTGCAGGAGTGCTGAATGGGGAATCAGTAGAGACTTCAGTTCTTAACTACCGGGAATTAAGTCCTCACAAGAA  1109

Query 1185  TAGACTCTTGTCACCTCTTCGCTGTTCTGCACCAATGTCGCTACATAATTCTCTGGTGAAACCAGAGAGACAGT  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110  TAGACTCTTGTCACCTCTTCGCTGTTCTGCACCAATGTCGCTACATAATTCTCTGGTGAAACCAGAGAGACAGT  1183

Query 1259  CCAAATGTTTTGAGTTTGGGAAGCTACAGCCTTCTTCTTCTCAGTCACTGGATGTTCAAAACATAACTGATTCT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184  CCAAATGTTTTGAGTTTGGGAAGCTACAGCCTTCTTCTTCTCAGTCACTGGATGTTCAAAACATAACTGATTCT  1257

Query 1333  TCTTTCTCTAGGACTACTTGCTTTCAAGGTGTTAAAGTTGATTCGCTTGGGAAAAGATCTGATGTTATTTCCAA  1406
            ||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 1258  TCTTTCTCTAGGACTACTTGCTTTCAAGGTGTTAAAGTTGATTCACTTGGGAAAAGATCTGATGTTATTTCCAA  1331

Query 1407  AGTTGAGGCTCGGGATATCACAGAAATGACTAACAAGGCTTCCAAAGAGCCTGTTGGTTGTGTAAATAATATCA  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332  AGTTGAGGCTCGGGATATCACAGAAATGACTAACAAGGCTTCCAAAGAGCCTGTTGGTTGTGTAAATAATATCA  1405

Query 1481  GTTTTCTTGCCTCACTGGCCGGGAGCACAAGCAGAAATAGATTACAGAGCACACGTGGGGCAGGCAGGCTTCAG  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406  GTTTTCTTGCCTCACTGGCCGGGAGCACAAGCAGAAATAGATTACAGAGCACACGTGGGGCAGGCAGGCTTCAG  1479

Query 1555  AACTCTGGAACTGGGCTGTCTACAAACCTCCAGCATTTTCAGGAAGAAAACTTTAGGAAAAGTTCTCCCCAGTT  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480  AACTCTGGAACTGGGCTGTCTACAAACCTCCAGCATTTTCAGGAAGAAAACTTTAGGAAAAGTTCTCCCCAGTT  1553

Query 1629  AGAACATACAGGAGTTTTTTTGTCTACCCATGGTGTTGGAATGAATGGAAATAATGCAGCAGCAGGGAAAAGCG  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554  AGAACATACAGGAGTTTTTTTGTCTACCCATGGTGTTGGAATGAATGGAAATAATGCAGCAGCAGGGAAAAGCG  1627

Query 1703  TAGGAGAATGTACTACTCATCACCTCCCACCTGTGAAAGCCCCTCTTCAGACAAAGAAGAAAACAACAAATCAT  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628  TAGGAGAATGTACTACTCATCACCTCCCACCTGTGAAAGCCCCTCTTCAGACAAAGAAGAAAACAACAAATCAT  1701

Query 1777  TGTTTTCTTTGTGGAAAGAAAACAGGACTGGCTAGTAGCTACGAATGCAGATGTGGAAACAACTTCTGTGCATC  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702  TGTTTTCTTTGTGGAAAGAAAACAGGACTGGCTAGTAGCTACGAATGCAGATGTGGAAACAACTTCTGTGCATC  1775

Query 1851  TCATCGTTATGCAGAAACTCATGGCTGTACCTATGATTACAAGAGTGCAGGGAGGAGATACTTGCACGAGGCAA  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1776  TCATCGTTATGCAGAAACTCATGGCTGTACCTATGATTACAAGAGTGCAGGGAGGAGATACTTGCACGAGGCAA  1849

Query 1925  ATCCTGTGGTTAATGCACCAAAGCTTCCAAAAATC  1959
            |||||||||||||||||||||||||||||||||||
Sbjct 1850  ATCCTGTGGTTAATGCACCAAAGCTTCCAAAAATC  1884

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