Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13019
- Subject:
- NM_001205371.1
- Aligned Length:
- 1318
- Identities:
- 824
- Gaps:
- 389
Alignment
Query 1 ATGGTGGGTTTCGGGGCCAACCGGCGGGCTGGCCGCCTGCCCTCTCTCGTGCTGGTGGTGCTGCTGGTGGTGAT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CGTCGTCCTCGCCTTCAACTACTGGAGCATCTCCTCCCGCCACGTCCTGCTTCAGGAGGAGGTGGCCGAGCTGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGGGCCAGGTCCAGCGCACCGAAGTGGCCCGCGGGCGGCTGGAAAAGCGCAATTCGGACCTCTTGCTGTTGGTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GACACGCACAAGAAACAGATCGACCAGAAGGAGGCCGACTACGGCCGCCTCAGCAGCCGGCTGCAGGCCAGAGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGGCCTCGGGAAGAGATGCGAGGATGACAAGGTTAAACTACAGAACAACATATCGTATCAGATGGCAGACATAC 370
|||||||||||||
Sbjct 1 -------------------------------------------------------------ATGGCAGACATAC 13
Query 371 ATCATTTAAAGGAGCAACTTGCTGAGCTTCGTCAGGAATTTCTTCGACAAGAAGACCAGCTTCAGGACTATAGG 444
|||||||||||||||||||.|||||||||||||||||.|||||||||||.|||||.||||||||.|||||.|||
Sbjct 14 ATCATTTAAAGGAGCAACTGGCTGAGCTTCGTCAGGAGTTTCTTCGACAGGAAGATCAGCTTCAAGACTACAGG 87
Query 445 AAGAACAATACTTACCTTGTGAAGAGGTTAGAATATGAAAGTTTTCAGTGTGGACAGCAGATGAAGGAATTGAG 518
||.||.|||||.||||||||.|||.||.|||||||.||.|||||||||||||||||||||||.|||||.||.||
Sbjct 88 AAAAATAATACCTACCTTGTCAAGCGGCTAGAATACGAGAGTTTTCAGTGTGGACAGCAGATCAAGGAGTTAAG 161
Query 519 AGCACAGCATGAAGAAAATATTAAAAAGTTAGCAGACCAGTTTTTAGAGGAACAAAAGCAAGAGACCCAAAAGA 592
||||||.||||||||||||||||||||.||||||||.||||||||..||||||||||| |||||.||.||||
Sbjct 162 AGCACAACATGAAGAAAATATTAAAAAATTAGCAGATCAGTTTTTGCAGGAACAAAAG---GAGACTCATAAGA 232
Query 593 TTCAATCAAATGATGGAAAGGAATTGGATATAAACAATCAAGTAGTACCTAAAAATATTCCAAAAGTAGCTGAG 666
|||||||||||||||||||.|||||||.||.||||.||||.|.||.||||||||||||||||||.||..||||.
Sbjct 233 TTCAATCAAATGATGGAAAAGAATTGGGTAGAAACGATCATGGAGCACCTAAAAATATTCCAAATGTGCCTGAA 306
Query 667 AATGTTGCAGATAAGAATGAAGAACCCTCAAGCAATCATATTCCACATGGGAAAGAACAAATCAAAAGAGGTGG 740
||||.||||.|||||||||||||.|||||||||||||||.||||.|||||||||||||||.|||||.|||.|||
Sbjct 307 AATGATGCAAATAAGAATGAAGACCCCTCAAGCAATCATCTTCCCCATGGGAAAGAACAACTCAAACGAGTTGG 380
Query 741 TGATGCAGGGATGCCTGGAATAGAAGAGAATGACCTAGCAAAAGTTGATGATCTTCCCCCTGCTTTAAGGAAGC 814
|||||||||||||||||||.|||||||||||||||||||||||||.||.||.|||||..|||||||||.|||||
Sbjct 381 TGATGCAGGGATGCCTGGAGTAGAAGAGAATGACCTAGCAAAAGTAGACGAGCTTCCTGCTGCTTTAAAGAAGC 454
Query 815 CTCCTATTTCAGTTTCTCAACATGAAAGTCATCAAGCAATCTCCCATCTTCCAACTGGACAACCTCTCTCCCCA 888
|.|||.|.|.||.|||||||||||||||||||||..|||||||||||||||||||||||||.||||||||.|||
Sbjct 455 CCCCTGTGTTAGCTTCTCAACATGAAAGTCATCAGACAATCTCCCATCTTCCAACTGGACAGCCTCTCTCACCA 528
Query 889 AATATGCCTCCAGATTCACACATAAACCACAATGGAAACCCCGGTACTTCAAAACAGAATCCTTCCAGTCCTCT 962
||.|||.||||||.||||||..|||||||.||||.|||.|||.||||||||||||||||.|||||.|.||||||
Sbjct 529 AACATGGCTCCAGGTTCACATCTAAACCAGAATGAAAATCCCAGTACTTCAAAACAGAACCCTTCAAATCCTCT 602
Query 963 TCAGCGTTTAATTCCAGGCTCAAACTTGGACAGTGAACCCAGAATTCAAACAGATATACTAAAGCAGGCTACCA 1036
|||||...|||||||||||.||||||||||..|.||||||||||||||||||||.|...||||||||||.||||
Sbjct 603 TCAGCACATAATTCCAGGCCCAAACTTGGATCGGGAACCCAGAATTCAAACAGACACGTTAAAGCAGGCCACCA 676
Query 1037 AGGACAGAGTCAGTGATTTCCATAAATTGAAGCAAAGCCGATTCTTTGATGAAAATGAATCCCCTGTTGATCCG 1110
.||||||||.||.|||||||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||
Sbjct 677 GGGACAGAGCCAATGATTTCCACAAGTTGAAGCAAAGCCGGTTCTTTGATGAGAATGAATCCCCTGTTGATCCG 750
Query 1111 CAGCATGGCTCTAAACTGGCGGATTATAATGGGGATGATGGTAACGTAGGTGAGTATGAGGCAGACAAGCAGGC 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 CAGCATGGCTCTAAACTGGCGGATTATAATGGGGATGATGGTAACGTAGGTGAGTATGAGGCAGACAAGCAGGC 824
Query 1185 TGAGCTGGCTTACAATGAGGAAGAAGATGGTGATGGTGGAGAGGAAGACGTCCAAGGT------GAGCGTGGGC 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.| ||.||.|.||
Sbjct 825 TGAGCTGGCTTACAATGAGGAAGAAGATGGTGATGGTGGAGAGGAAGACGTCCAAGATGATGAAGAACGAGAGC 898
Query 1253 -----CTGG--CCTCCATGCTATAACCATGAAACCCACCTCT------AAGTTTTTTGGT 1299
.||| |||.||..||||..| ||| ||.|.|| |.||..||
Sbjct 899 TTCAGATGGATCCTGCAGACTATGGC----AAA--CAGCGCTTCAGTGATGTCCTT---- 948