Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13021
- Subject:
- NM_001284521.1
- Aligned Length:
- 1980
- Identities:
- 509
- Gaps:
- 1416
Alignment
Query 1 ---------------------ATGTATTCTTCATCTTGTGAAACCACAAGAAATACTACAGGCATTGAAGAATC 53
|||||||||.|||||||||||||||||||.||||||.|||...|||||||.||
Sbjct 1 ATGTGTAAGGAATATGAAGTAATGTATTCTCCATCTTGTGAAACCACAAGGAATACTGCAGATGTTGAAGAGTC 74
Query 54 AACTGATGGGATGATTTTAGGACCAGAAGATCTGAGTTACCAAATATATGATGTTTCCGGAGAAAGCAATTCAG 127
|.|||||||.|||||.||||||||.|||||.||||||||||||.|.|||||||||||.||||||||||.|||||
Sbjct 75 AGCTGATGGAATGATCTTAGGACCGGAAGACCTGAGTTACCAACTCTATGATGTTTCTGGAGAAAGCAGTTCAG 148
Query 128 CAGTTTCTACAGAAGACCTAAAAGAATGTCTGAAGAAACAATTAGAATTCTGTTTTTCACGAGAAAATTTGTCA 201
||.|||||||||||||..||||||||||||||||.||||||||.|||||||||||.||||||||||||||.|||
Sbjct 149 CAATTTCTACAGAAGATTTAAAAGAATGTCTGAAAAAACAATTGGAATTCTGTTTCTCACGAGAAAATTTATCA 222
Query 202 AAGGATCTTTACTTGATATCTCAAATGGATAGTGATCAGTTCATCCCAATTTGGACAGTTGCCAACATGGAAGA 275
|||||.||||||||||||||||||||||||||||||||||||.|||||||.|||||.|||||||||||||||||
Sbjct 223 AAGGACCTTTACTTGATATCTCAAATGGATAGTGATCAGTTCGTCCCAATATGGACGGTTGCCAACATGGAAGA 296
Query 276 AATAAAAAAGTTGACTACAGACCCTGATCTAATTCTTGAAGTGTTAAGATCTTCTCCCATGGTACAAGTTGATG 349
|||.|||||.|||||||||.|..|.|||.|||||||||||||.||.||||||||.||.||||||||||||||||
Sbjct 297 AATTAAAAAATTGACTACAAATACAGATTTAATTCTTGAAGTATTGAGATCTTCCCCTATGGTACAAGTTGATG 370
Query 350 AGAAGGGTGAGAAAGTGAGACCAAGTCATAAGCGTTGTATTGTAATTCTTAGAGAGATTCCTGAAACAACACCA 423
|||||||.||.||.||||||||||||||||||||.||||||||.|||||.||||||||||||||.|||||.||.
Sbjct 371 AGAAGGGAGAAAAGGTGAGACCAAGTCATAAGCGATGTATTGTGATTCTCAGAGAGATTCCTGAGACAACGCCT 444
Query 424 ATAGAGGAAGTGAAAGGTTTGTTCAAAAGTGAAAACTGCCCCAAAGTGATAAGCTGTGAGTTTGCACACAATAG 497
.|||||||||||||||.||||||.||||.||||||||||||||||||||||||||||||||||||.|||||.||
Sbjct 445 GTAGAGGAAGTGAAAGCTTTGTTTAAAAATGAAAACTGCCCCAAAGTGATAAGCTGTGAGTTTGCGCACAACAG 518
Query 498 CAACTGGTATATCACTTTCCAGTCAGACACAGATGCACAACAGGCTTTT--ATACTTAAGAGAAGAAGT----- 564
|||||||||.|||||||||||||||||||||||||||||.||||||||| ||||||||||||||||||
Sbjct 519 CAACTGGTACATCACTTTCCAGTCAGACACAGATGCACAGCAGGCTTTTAAATACTTAAGAGAAGAAGTTAAAA 592
Query 565 -------------------------------------------------------------------------- 564
Sbjct 593 CATTTCAGGGCAAGCCAATCATGGCAAGGATAAAAGCCATCAATACATTTTTTGCTAAGAATGGTTATCGATTA 666
Query 565 -------------------------------------------------------------------------- 564
Sbjct 667 ATGGATTCTAGTATGTATACTCAACCTATTCAGACTCCTACCCAATATCCCTCACCAGTCTTCATGCAACCAGT 740
Query 565 -------------------------------------------------------------------------- 564
Sbjct 741 GTATAATCCTCAGCAGTACTCAGTGTATAGTCTTGTGCCTCAGTCTTGGTCTCCAAGTCCTGCACCTTACTTTG 814
Query 565 -------------------------------------------------------------------------- 564
Sbjct 815 AAACACCACTGGCTCCCTTTCCCAATGGTAGTTTTGTGAATGGCTTTAGTTCACCAGGATCTTACAAAACAAAT 888
Query 565 -------------------------------------------------------------------------- 564
Sbjct 889 GCTGCTGCTATGAATATGGGCCGACCATTCCCAAAAAATCGTGTGAAGCCTCATTTTAGGTCATCCAGTGGTTC 962
Query 565 -------------------------------------------------------------------------- 564
Sbjct 963 AGAACACTCAACAGAGGGCTCCGTGTCATTGGGGGATGGACCACTGAGCAGATCTAGTTCAAGGATCTTTCTTT 1036
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1037 CTGAACGGCATAACCCAACAGTAACAGGGCAGCAGGAACAAACTTATCTTCCAAAGGAGGCTCCCATTTTACAG 1110
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1111 ATGGAACAGAATGGGGACTTTGGAAGAGGCAGGCGAACTCTCTTCAGAGGCCGAAGGCGAAGGGATGATGACAG 1184
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1185 GATCCCAAGACCCCAACCTGCAGCAACTGAAGCCAAGGCTCCAACTCCGAAGTTTGATTTGCTTGCTACAAATT 1258
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1259 TCCCTCCTTTACCTGGAAGCTCATCGAGAGTGCCAGATGAACTTGGTTTGGAGAACAGAATGTCTGATGTCGTT 1332
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1333 AAAGGTGTCTGCAGAGAAAAGGACAGCGAGGACGTGCGAGTTAGTTGCCCAGTGCCTGCAGAGGACGGACAGAC 1406
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1407 AGACTGCACTTCTGCGCCGCTCAGCATAAGTCCTAGTCCTCCGTGTACAGCTGAGCCTCCTGTGTTAAGCACGA 1480
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1481 CTCAGCAAGAGCAGGATCAGATGGAGGACTCTGCTGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTG 1554
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1555 TCTTCTCCAACTGCCACAAAGCCATCCCCGGCAAACACGGCTTCACCTTGCACTAGTAACATAAACCCACCGAG 1628
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1629 AGCTGTGGCCCTGCAGGAACCTCGAAAGTTAAGCTATGCTGAAGTGTGCCAGAAGCCTCCTAAAGAGCCATCTC 1702
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1703 CAGTTCTCGTACAGCCGCTGCGGGAACTCCGGTCTAATGCAGTATCCCCCACCAGAAATGAAGAGAACGGAGCT 1776
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1777 CCCGAGAAGCCTGTTGAGAAGCCGCATGAGAAACCAGAAACAAGGGCTAGTAAGGATCATTCTGGCTTCCGAGG 1850
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1851 CAACACTATTCCCAGGGGAGCGGCTGGAAAAATCAGGGAACAGAGACGCCAGTTCAGCCATAGGGCTACACCTC 1924
Query 565 -------------------------------------------------------- 564
Sbjct 1925 AGGGAGTGACTCGACGTAATGGGAAAGAGCAATACGTGCCACCCAGATCACCAAAG 1980
