Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13021
- Subject:
- NM_199188.3
- Aligned Length:
- 2169
- Identities:
- 564
- Gaps:
- 1605
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTGCTTTTCGTGGAGGTAGCATCTAAAGGAACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAATTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTGGAAATACTGATGCCACCCCAGTAACTCATGGAACTGAAAGCTCTTGGCATGAAATAGCAGCTACATCAG 148
Query 1 -----------------------------------------------------------ATGTATTCTTCATCT 15
|||||||||||||||
Sbjct 149 GTGCTCATCCTGAGGGTAATGCAGAGCTCTCAGAAGATATATGTAAAGAATATGAAGTAATGTATTCTTCATCT 222
Query 16 TGTGAAACCACAAGAAATACTACAGGCATTGAAGAATCAACTGATGGGATGATTTTAGGACCAGAAGATCTGAG 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGTGAAACCACAAGAAATACTACAGGCATTGAAGAATCAACTGATGGGATGATTTTAGGACCAGAAGATCTGAG 296
Query 90 TTACCAAATATATGATGTTTCCGGAGAAAGCAATTCAGCAGTTTCTACAGAAGACCTAAAAGAATGTCTGAAGA 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTACCAAATATATGATGTTTCCGGAGAAAGCAATTCAGCAGTTTCTACAGAAGACCTAAAAGAATGTCTGAAGA 370
Query 164 AACAATTAGAATTCTGTTTTTCACGAGAAAATTTGTCAAAGGATCTTTACTTGATATCTCAAATGGATAGTGAT 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AACAATTAGAATTCTGTTTTTCACGAGAAAATTTGTCAAAGGATCTTTACTTGATATCTCAAATGGATAGTGAT 444
Query 238 CAGTTCATCCCAATTTGGACAGTTGCCAACATGGAAGAAATAAAAAAGTTGACTACAGACCCTGATCTAATTCT 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAGTTCATCCCAATTTGGACAGTTGCCAACATGGAAGAAATAAAAAAGTTGACTACAGACCCTGATCTAATTCT 518
Query 312 TGAAGTGTTAAGATCTTCTCCCATGGTACAAGTTGATGAGAAGGGTGAGAAAGTGAGACCAAGTCATAAGCGTT 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAAGTGTTAAGATCTTCTCCCATGGTACAAGTTGATGAGAAGGGTGAGAAAGTGAGACCAAGTCATAAGCGTT 592
Query 386 GTATTGTAATTCTTAGAGAGATTCCTGAAACAACACCAATAGAGGAAGTGAAAGGTTTGTTCAAAAGTGAAAAC 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTATTGTAATTCTTAGAGAGATTCCTGAAACAACACCAATAGAGGAAGTGAAAGGTTTGTTCAAAAGTGAAAAC 666
Query 460 TGCCCCAAAGTGATAAGCTGTGAGTTTGCACACAATAGCAACTGGTATATCACTTTCCAGTCAGACACAGATGC 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGCCCCAAAGTGATAAGCTGTGAGTTTGCACACAATAGCAACTGGTATATCACTTTCCAGTCAGACACAGATGC 740
Query 534 ACAACAGGCTTTT--ATACTTAAGAGAAGAAGT----------------------------------------- 564
||||||||||||| ||||||||||||||||||
Sbjct 741 ACAACAGGCTTTTAAATACTTAAGAGAAGAAGTTAAAACATTTCAGGGCAAGCCAATTATGGCAAGGATAAAAG 814
Query 565 -------------------------------------------------------------------------- 564
Sbjct 815 CCATCAATACATTTTTTGCTAAGAATGGTTATCGATTAATGGATTCTAGTATCTATAGTCACCCCATTCAAACT 888
Query 565 -------------------------------------------------------------------------- 564
Sbjct 889 CAAGCACAGTATGCCTCCCCAGTCTTTATGCAGCCTGTATATAATCCTCACCAACAGTACTCGGTCTATAGTAT 962
Query 565 -------------------------------------------------------------------------- 564
Sbjct 963 TGTGCCTCAGTCTTGGTCTCCAAATCCTACACCTTACTTTGAAACACCACTGGCTCCCTTTCCCAATGGTAGTT 1036
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1037 TTGTGAATGGCTTTAATTCGCCAGGATCTTATAAAACAAATGCTGCTGCTATGAATATGGGTCGACCATTCCAA 1110
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1111 AAAAATCGTGTGAAGCCTCAGTTTAGGTCATCTGGTGGTTCAGAACACTCAACAGAGGGCTCTGTATCCTTGGG 1184
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1185 GGATGGACAGTTGAACAGATATAGTTCAAGAAACTTTCCAGCTGAACGGCATAACCCCACAGTAACTGGGCATC 1258
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1259 AGGAGCAAACTTACCTTCAGAAGGAGACTTCCACTTTGCAGGTGGAACAGAATGGGGACTATGGTAGGGGCAGG 1332
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1333 AGAACTCTCTTCAGAGGTCGAAGACGACGAGAAGATGACAGGATCTCAAGACCTCATCCTTCAACAGCTGAATC 1406
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1407 AAAGGCTCCAACACCAAAGTTTGACTTATTAGCCTCAAATTTTCCACCTTTACCTGGAAGTTCATCAAGAATGC 1480
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1481 CAGGTGAACTCGTTTTGGAGAATAGGATGTCTGATGTTGTTAAAGGTGTCTACAAAGAAAAGGATAATGAAGAG 1554
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1555 TTGACAATTAGTTGCCCAGTGCCTGCAGATGAGCAGACAGAATGCACTTCTGCCCAGCAACTCAATATGAGTAC 1628
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1629 CAGTTCTCCATGTGCTGCTGAGCTTACTGCATTAAGCACAACTCAGCAAGAAAAGGATCTAATAGAAGATTCCT 1702
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1703 CTGTTCAGAAGGATGGTCTCAATCAGACAACTATACCAGTTTCTCCTCCAAGTACTACAAAGCCATCGAGGGCA 1776
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1777 AGTACTGCTTCACCATGTAATAATAACATAAATGCAGCTACAGCTGTGGCTCTACAGGAACCCCGAAAGTTAAG 1850
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1851 TTATGCTGAAGTGTGCCAGAAGCCCCCTAAAGAGCCATCTTCAGTTCTTGTGCAGCCACTACGGGAACTTCGCT 1924
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1925 CCAATGTGGTGTCTCCCACCAAAAATGAAGACAATGGAGCTCCTGAGAACTCCGTTGAGAAACCACATGAGAAG 1998
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1999 CCAGAAGCAAGGGCTAGTAAGGATTATTCTGGCTTCCGAGGCAATATAATCCCCAGGGGAGCAGCAGGAAAAAT 2072
Query 565 -------------------------------------------------------------------------- 564
Sbjct 2073 CAGGGAACAGAGACGCCAGTTTAGCCATAGGGCTATACCTCAGGGAGTGACTCGACGTAATGGCAAAGAGCAAT 2146
Query 565 ----------------------- 564
Sbjct 2147 ATGTGCCACCCAGATCACCAAAG 2169
