Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13031
- Subject:
- NM_001033633.3
- Aligned Length:
- 1961
- Identities:
- 829
- Gaps:
- 997
Alignment
Query 1 ---------------------------------------------------------ATGGGCGAGCGGCGCAG 17
|||||||||.|||||.|
Sbjct 1 ATGTCCCGCAAGGCGAGCGAGGACGTGGAGTACACGCTGCGCAGCCTGAGCAGCCTGATGGGCGAGAGGCGCCG 74
Query 18 GAAGCAGCCGGAGCCGGACGCGGCGAGCGC--GGCCGGGGAGTGCAGCCTCCTGGCTGCCGCCGAATCGAGCAC 89
...|||||||||||||| |.|||| || |||||||.||||||||||| ||||||||.|||..|.|
Sbjct 75 CCGGCAGCCGGAGCCGG-------GGGCGCCAGG-CGGGGAGCGCAGCCTCCTG---GCCGCCGAGTCGGCCGC 137
Query 90 CAGCCTGCAGAGCGCGGGCGCGGGCGGCGGCGGCGTCGGGGACCTGGAGCGCGCGGCGCGGCGGCAGTTCCAGC 163
||||||||||.|||| |||.|||||||||||||||||..||||||||||||
Sbjct 138 CAGCCTGCAGGGCGC------------------------GGAGCTGGAGCGCGCGGCGCGCAGGCAGTTCCAGC 187
Query 164 AGGACGAGACCCCCGCCTTCGTGTACGTGGTGGCCGTCTTCTCCGCGCTGGGCGGCTTCCTGTTTGGCTATGAC 237
..|||||||||||.|||||||||||||.||..||||.||||||.|||||.||||||||||||||.|||||.|||
Sbjct 188 GCGACGAGACCCCGGCCTTCGTGTACGCGGCCGCCGCCTTCTCGGCGCTCGGCGGCTTCCTGTTCGGCTACGAC 261
Query 238 ACCGGGGTGGTGTCAGGGGCCATGCTGCTGCTCAAGCGGCAGCTCAGTCTGGACGCGCTGTGGCAGGAGCTGCT 311
|||||.||||||||.|||||||||||||||||...|||.|||.|..|.||||.||||.||||||||||||||||
Sbjct 262 ACCGGCGTGGTGTCGGGGGCCATGCTGCTGCTGCGGCGCCAGATGCGCCTGGGCGCGATGTGGCAGGAGCTGCT 335
Query 312 GGTGTCCAGCACGGTGGGGGCGGCTGCCGTCTCGGCGCTGGCCGGAGGCGCCCTCAACGGCGTCTTCGGCCGCC 385
||||||..||.|||||||.|||||.||||||.||||||||||||||||.|||||.|||||||.|.||||.||.|
Sbjct 336 GGTGTCGGGCGCGGTGGGCGCGGCCGCCGTCGCGGCGCTGGCCGGAGGGGCCCTGAACGGCGCCCTCGGTCGGC 409
Query 386 GC-GCTGCCATCCTCCTGGCCAGTGCCCTCTTCACCGCCGGCTCCGCGGTGCTGGCTGCGGCCAACAACAAGGA 458
|| || ||||||||.||||||||.|||||.|.|||||..||||||||.||||||||.||.|||..|||||||||
Sbjct 410 GCAGC-GCCATCCTGCTGGCCAGCGCCCTGTGCACCGTGGGCTCCGCCGTGCTGGCCGCCGCCGCCAACAAGGA 482
Query 459 GACACTGCTCGCCGGCCGCCTGGTCGTGGGACTCGGCATCGGCATTGCTTCTATGACAGTGCCAGTGTACATTG 532
|||.|||||.||||||||||||||||||||.||||||||||||||.||.||.|||||.|||||.||||||||.|
Sbjct 483 GACGCTGCTGGCCGGCCGCCTGGTCGTGGGGCTCGGCATCGGCATCGCATCCATGACCGTGCCCGTGTACATCG 556
Query 533 CGGAGGTCTCACCACCCAATTTAAGAGGCCGATTAGTCACCATTAATACCCTCTTCATCACAGGAGGGCAGTTC 606
|||||||.||.||||||||..|.|||||.||..|.||||||||.||.|||||||||||||||||.||.||||||
Sbjct 557 CGGAGGTTTCTCCACCCAACCTGAGAGGTCGCCTGGTCACCATCAACACCCTCTTCATCACAGGCGGACAGTTC 630
Query 607 TTTGCAAGTGTTGTTGATGGAGCCTTCAGTTATCTCCAGAAGGATGGATGGAGGTACATGTTGGGACTTGCAGC 680
||||||||||||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||||||||.||
Sbjct 631 TTTGCAAGTGTTGTCGATGGCGCCTTCAGTTACCTGCAGAAGGATGGATGGAGGTACATGTTGGGACTTGCGGC 704
Query 681 AGTTCCGGCGGTTATACAGTTTTTTGGCTTTCTCTTTTTGCCTGAAAGCCCTCGATGGCTTATTCAGAAAGGAC 754
..||||.||.||||||||||||.||||.||.|||||||||||.|||||||||||.|||||.||||||||.||||
Sbjct 705 CATTCCAGCTGTTATACAGTTTCTTGGATTCCTCTTTTTGCCCGAAAGCCCTCGGTGGCTGATTCAGAAGGGAC 778
Query 755 AGACTCAGAAGGCCCGTAGAATTTTATCTCAGATGCGTGGTAACCAGACCATTGATGAGGAATATGATAGCATC 828
||||||||||||||||..|||||||.||.|||||||||||.||.|||||||||||||||||.|||||.||||||
Sbjct 779 AGACTCAGAAGGCCCGCCGAATTTTGTCCCAGATGCGTGGCAATCAGACCATTGATGAGGAGTATGACAGCATC 852
Query 829 AAAAACAACATTGAAGAGGAGGAAAAAGAGGTTGGCTCAGCTGGACCTGTGATCTGCAGAATGCTGAGTTATCC 902
|..||||..||.||.|||||||||||.||.|....|.|||||||||||.|.||||||||||||||||||||.||
Sbjct 853 AGGAACAGTATCGAGGAGGAGGAAAAGGAAGCCACCGCAGCTGGACCTATAATCTGCAGAATGCTGAGTTACCC 926
Query 903 CCCAACTCGCCGAGCTTTAATTGTGGGTTGTGGCCTACAAATGTTCCAGCAGCTCTCAGGCATTAACACCATCA 976
|||||||||||||||.|||.|||||||.||||||.||||.|||||||||||.|||||.|||||.|||||.||||
Sbjct 927 CCCAACTCGCCGAGCGTTAGTTGTGGGATGTGGCTTACAGATGTTCCAGCAACTCTCGGGCATCAACACTATCA 1000
Query 977 TGT-----------------------ATGTATTTCTTTCTGGCTTTTTACTGAAA------AGA-TTG------ 1014
||| ||| ||.||| .||.|| ||| |||
Sbjct 1001 TGTACTACAGCGCAACCATCCTCCAGATG--------TCCGGC------GTGGAAGATGACAGACTTGCAATAT 1060
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1061 GGCTGGCTTCGATCACAGCATTCACCAATTTCATTTTCACACTAGTGGGAGTCTGGCTCGTCGAGAAAGTGGGT 1134
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1135 CGCAGGAAGCTTACCTTTGGTAGTTTGGCAGGTACCACAGTAGCACTGATTATCCTTGCCCTGGGATTTTTGCT 1208
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1209 CTCGGCACAGGTCTCACCACGGGTCACTTTTAGACCAACGACTCCTTCGGATCAAAATACCACCTGCACGGGAT 1282
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1283 ACAGTTACTGCAATGAGTGTATGCTGGATCCAGACTGTGGTTTCTGCTACAAGATCAACGGTTCAGCTGTCATT 1356
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1357 GATTCCTCCTGTGTTCCAGTTAACAAAGCCTCTACAACTGAAGCAGCCTGGGGCAGGTGTGATAATGAAACCAA 1430
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1431 GTTCAAAGCTGAAGGTGCTCACTGGGCTTACAGTTTCTGCCCTACCCCCTACTCCTGGACAGCACTCGTGGGCC 1504
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1505 TGGTGTTGTACCTTGTTTTCTTTGCACCTGGAATGGGACCAATGCCCTGGACCGTGAACTCTGAAATCTATCCT 1578
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1579 CTCTGGGCAAGAAGTACAGGAAATGCGTGCTCAGCTGGAATAAACTGGATTTTCAACGTGCTGGTTTCTTTGAC 1652
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1653 CTTTTTACACACAGCAGAGTATCTTACATACTATGGAGCATTCTTCCTCTACGCCGGATTCGCCGCTGTGGGAC 1726
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1727 TGCTTTTTGTCTATGGCTGCCTCCCTGAAACCAAGGGGAAAAAATTGGAGGAAATCGAATCGCTCTTTGACCAC 1800
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1801 CGGCTATGTTCATGTGGCGCTGCCGACTCGGATGAAGGGAGGTACATTGAGTACATCCGCGTGAAGGGAAGCAA 1874
Query 1015 ------------------------------------- 1014
Sbjct 1875 CTATCATCTCTCCGACAACGACGCTTCTGACGTGGAG 1911
