Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13031
- Subject:
- NM_052885.4
- Aligned Length:
- 1949
- Identities:
- 1002
- Gaps:
- 940
Alignment
Query 1 ---------------------------------------------------------ATGGGCGAGCGGCGCAG 17
|||||||||||||||||
Sbjct 1 ATGTCCCGCAAGGCAAGCGAGAATGTGGAGTACACGCTGCGGAGCCTGAGCAGCCTGATGGGCGAGCGGCGCAG 74
Query 18 GAAGCAGCCGGAGCCGGACGCGGCGAGCGCGGCCGGGGAGTGCAGCCTCCTGGCTGCCGCCGAATCGAGCACCA 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAAGCAGCCGGAGCCGGACGCGGCGAGCGCGGCCGGGGAGTGCAGCCTCCTGGCTGCCGCCGAATCGAGCACCA 148
Query 92 GCCTGCAGAGCGCGGGCGCGGGCGGCGGCGGCGTCGGGGACCTGGAGCGCGCGGCGCGGCGGCAGTTCCAGCAG 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCCTGCAGAGCGCGGGCGCGGGCGGCGGCGGCGTCGGGGACCTGGAGCGCGCGGCGCGGCGGCAGTTCCAGCAG 222
Query 166 GACGAGACCCCCGCCTTCGTGTACGTGGTGGCCGTCTTCTCCGCGCTGGGCGGCTTCCTGTTTGGCTATGACAC 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GACGAGACCCCCGCCTTCGTGTACGTGGTGGCCGTCTTCTCCGCGCTGGGCGGCTTCCTGTTTGGCTATGACAC 296
Query 240 CGGGGTGGTGTCAGGGGCCATGCTGCTGCTCAAGCGGCAGCTCAGTCTGGACGCGCTGTGGCAGGAGCTGCTGG 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CGGGGTGGTGTCAGGGGCCATGCTGCTGCTCAAGCGGCAGCTCAGTCTGGACGCGCTGTGGCAGGAGCTGCTGG 370
Query 314 TGTCCAGCACGGTGGGGGCGGCTGCCGTCTCGGCGCTGGCCGGAGGCGCCCTCAACGGCGTCTTCGGCCGCCGC 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGTCCAGCACGGTGGGGGCGGCTGCCGTCTCGGCGCTGGCCGGAGGCGCCCTCAACGGCGTCTTCGGCCGCCGC 444
Query 388 GCTGCCATCCTCCTGGCCAGTGCCCTCTTCACCGCCGGCTCCGCGGTGCTGGCTGCGGCCAACAACAAGGAGAC 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCTGCCATCCTCCTGGCCAGTGCCCTCTTCACCGCCGGCTCCGCGGTGCTGGCTGCGGCCAACAACAAGGAGAC 518
Query 462 ACTGCTCGCCGGCCGCCTGGTCGTGGGACTCGGCATCGGCATTGCTTCTATGACAGTGCCAGTGTACATTGCGG 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACTGCTCGCCGGCCGCCTGGTCGTGGGACTCGGCATCGGCATTGCTTCTATGACAGTGCCAGTGTACATTGCGG 592
Query 536 AGGTCTCACCACCCAATTTAAGAGGCCGATTAGTCACCATTAATACCCTCTTCATCACAGGAGGGCAGTTCTTT 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGGTCTCACCACCCAATTTAAGAGGCCGATTAGTCACCATTAATACCCTCTTCATCACAGGAGGGCAGTTCTTT 666
Query 610 GCAAGTGTTGTTGATGGAGCCTTCAGTTATCTCCAGAAGGATGGATGGAGGTACATGTTGGGACTTGCAGCAGT 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCAAGTGTTGTTGATGGAGCCTTCAGTTATCTCCAGAAGGATGGATGGAGGTACATGTTGGGACTTGCAGCAGT 740
Query 684 TCCGGCGGTTATACAGTTTTTTGGCTTTCTCTTTTTGCCTGAAAGCCCTCGATGGCTTATTCAGAAAGGACAGA 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCCGGCGGTTATACAGTTTTTTGGCTTTCTCTTTTTGCCTGAAAGCCCTCGATGGCTTATTCAGAAAGGACAGA 814
Query 758 CTCAGAAGGCCCGTAGAATTTTATCTCAGATGCGTGGTAACCAGACCATTGATGAGGAATATGATAGCATCAAA 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCAGAAGGCCCGTAGAATTTTATCTCAGATGCGTGGTAACCAGACCATTGATGAGGAATATGATAGCATCAAA 888
Query 832 AACAACATTGAAGAGGAGGAAAAAGAGGTTGGCTCAGCTGGACCTGTGATCTGCAGAATGCTGAGTTATCCCCC 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AACAACATTGAAGAGGAGGAAAAAGAGGTTGGCTCAGCTGGACCTGTGATCTGCAGAATGCTGAGTTATCCCCC 962
Query 906 AACTCGCCGAGCTTTAATTGTGGGTTGTGGCCTACAAATGTTCCAGCAGCTCTCAGGCATTAACACCATCATGT 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AACTCGCCGAGCTTTAATTGTGGGTTGTGGCCTACAAATGTTCCAGCAGCTCTCAGGCATTAACACCATCATGT 1036
Query 980 A------TGTA---TTTC------TTTCTGGCTTTTTACTGAA-AAGATTG----------------------- 1014
| ||.| .||| |.||||| |..|||| |.|||.|
Sbjct 1037 ACTACAGTGCAACCATTCTGCAGATGTCTGG-----TGTTGAAGATGATAGACTTGCAATATGGCTGGCTTCAG 1105
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1106 TTACAGCCTTCACAAATTTCATTTTCACACTTGTGGGAGTCTGGCTTGTTGAGAAGGTGGGCCGCAGAAAGCTT 1179
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1180 ACCTTTGGTAGTTTAGCAGGTACCACCGTAGCACTCATTATTCTTGCCTTGGGATTTGTGCTATCAGCCCAAGT 1253
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1254 TTCCCCACGCATCACTTTTAAGCCAATAGCTCCGTCAGGTCAGAACGCCACTTGCACAAGATACAGTTACTGTA 1327
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1328 ATGAATGTATGTTGGATCCAGACTGCGGTTTCTGCTACAAGATGAACAAATCAACTGTCATTGACTCCTCCTGT 1401
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1402 GTTCCAGTTAATAAAGCATCTACAAATGAGGCAGCCTGGGGCAGGTGTGAAAATGAAACCAAGTTCAAAACAGA 1475
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1476 AGATATATTTTGGGCTTACAATTTCTGCCCTACTCCATACTCCTGGACTGCACTTCTGGGCCTTATTTTATATC 1549
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1550 TTGTCTTCTTTGCACCTGGAATGGGACCAATGCCTTGGACTGTGAATTCTGAAATATATCCCCTTTGGGCAAGA 1623
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1624 AGTACAGGAAATGCATGTTCATCTGGAATAAACTGGATTTTCAATGTCCTGGTTTCACTAACATTTTTACACAC 1697
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1698 AGCAGAGTATCTTACATACTATGGAGCTTTCTTCCTCTATGCTGGATTTGCTGCTGTGGGACTCCTTTTCATCT 1771
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1772 ATGGCTGTCTTCCTGAGACCAAAGGCAAAAAATTAGAGGAAATTGAATCACTCTTTGACAACAGGCTATGTACA 1845
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1846 TGTGGCACTTCAGATTCTGATGAAGGGAGATATATTGAATATATTCGGGTAAAGGGAAGTAACTATCATCTTTC 1919
Query 1015 ------------------------- 1014
Sbjct 1920 TGACAATGATGCTTCTGATGTGGAA 1944
