Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13044
- Subject:
- NR_037951.1
- Aligned Length:
- 3612
- Identities:
- 377
- Gaps:
- 3234
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGAGTAGTGCCTCCTCCCATCTCTCTTGCTCCTGGTCTCATCGTGACGGGCCTGGTCCTGCCTCACTTTCTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATGACTAAGAGCTCCCTGAGGCCTCTCCAGAAGCAGTCTCCACAAACCGGAGGACTACCCCCAGACTGCAGTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGTGTTGTCATGGAGACTACAGCTTTCGAGGCTACCAAGGCCCCCCTGGGCCACCGGGCCCTCCTGGCATTCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAAACCATGGAAACAATGGCAACAATGGAGCCACTGGTCATGAAGGAGCCAAAGGTGAGAAGGGCGACAAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGACCTGGGGCCTCGAGGGGAGCGGGGGCAGCATGGCCCCAAAGGAGAGAAGGGCTACCCGGGGATTCCACCAG 370
Query 1 -----------------ATGGCTTCTCTGGCAACCCACTTCAGCAATCAGAACAGTGGGATTATCTTCAGCAGT 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AACTTCAGATTGCATTCATGGCTTCTCTGGCAACCCACTTCAGCAATCAGAACAGTGGGATTATCTTCAGCAGT 444
Query 58 GTTGAGACCAACATTGGAAACTTCTTTGATGTCATGACTGGTAGATTTGGGGCCCCAGTATCAGGTGTGTATTT 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTTGAGACCAACATTGGAAACTTCTTTGATGTCATGACTGGTAGATTTGGGGCCCCAGTATCAGGTGTGTATTT 518
Query 132 CTTCACCTTCAGCATGATGAAGCATGAGGATGTTGAGGAAGTGTATGTGTACCTTATGCACAATGGCAACACAG 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTTCACCTTCAGCATGATGAAGCATGAGGATGTTGAGGAAGTGTATGTGTACCTTATGCACAATGGCAACACAG 592
Query 206 TCTTCAGCATGTACAGCTATGAAATGAAGGGCAAATCAGATACATCCAGCAATCATGCTGTGCTGAAGCTAGCC 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCTTCAGCATGTACAGCTATGAAATGAAGGGCAAATCAGATACATCCAGCAATCATGCTGTGCTGAAGCTAGCC 666
Query 280 GAAGGGGATGAGGTTTGGCTGCGAATGGGCAATGGCGCTCTCCATGGGGACCACCAACGCTTCTCCACCTTTGC 353
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAAGGGGATGAGGTTTGGCTGCGAATGGGCAATGGCGCTCTCCATGGGGACCACCAACGCTTCTCCACCTTTGC 740
Query 354 AGGATTCCTGCTCTTTGAAACTAAG------------------------------------------------- 378
|||||||||||||||||||||||||
Sbjct 741 AGGATTCCTGCTCTTTGAAACTAAGTGTCATGGAGAAACTCCAGCTGGGCCCAGAGATTCTGCAGCGGGAAAAT 814
Query 379 -------------------------------------------------------------------------- 378
Sbjct 815 CCAAGGCTTATTTATGCCAGGCTGAGTGGATTTGGCCAGTCAGGAAGCTTCTGCCGGTTAGCTGGCCACGATAT 888
Query 379 -------------------------------------------------------------------------- 378
Sbjct 889 CAACTATTTGGCTTTGTCAGGTGGAAGGAACAGCATATTTAAGTTCTTTTCTGTGGAAAACTCAGAAATTGAGT 962
Query 379 -------------------------------------------------------------------------- 378
Sbjct 963 CTGTGGGAAGCACCTCGAGGACAGAACATGTTGGATGGTGGAGCACCTTTCTATACGACTTACAGGACAGCAGA 1036
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1037 TGGGGAATTCATGGCTGTTGGAGCAATAGAACCCCAGTTCTACGAGCTGCTGATCAAAGGACTTGGACTAAAGT 1110
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1111 CTGATGAACTTCCCAATCAGATGAGCATGGATGATTGGCCAGAAATGAAGAAGAAGTTTGCAGATGTATTTGCA 1184
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1185 GAGAAGACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGACTCCGGTTCTGACTTTTGA 1258
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1259 GGAGGTTGTTCATCATGATCACAACAAGGAACGGGGCTCGTTTATCACCAGTGAGGAGCAGGACGTGAGCCCCC 1332
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1333 GCCCTGCACCTCTGCTGTTAAACACCCCAGCCATCCCTTCTTTCAAAAGGGATCCTTTCATAGGAGAACACACT 1406
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1407 GAGGAGATACTTGAAGAATTTGGATTCAGCCGCGAAGAGATTTATCAGCTTAACTCAGATAAAATCATTGAAAG 1480
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1481 TAATAAGGTAAAAGCTAGTCTCTAACTTCCAGGCCCACGGCTCAAGTGAATTTGAATACTGCATTTACAGTGTA 1554
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1555 GAGTAACACATAACATTGTATGCATGGAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAA 1628
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1629 AAGAATTACAGACTCTGATTCTACAGTGATGATTGAATTCTAAAAATGGTTATCATTAGGGCTTTTGATTTATA 1702
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1703 AAACTTTGGGTACTTATACTAAATTATGGTAGTTATTCTGCCTTCCAGTTTGCTTGATATATTTGTTGATATTA 1776
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1777 AGATTCTTGACTTATATTTTGAATGGGTTCTAGTGAAAAAGGAATGATATATTCTTGAAGACATCGATATACAT 1850
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1851 TTATTTACACTCTTGATTCTACAATGTAGAAAATGAGGAAATGCCACAAATTGTATGGTGATAAAAGTCACGTG 1924
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1925 AAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGTTCATGATCTCCCTCTAAGCACATTCCAAACTT 1998
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1999 TAGCAACAGTTATCACACTTTGTAATTTGCAAAGAAAAGTTTCACCTGTATTGAATCAGAATGCCTTCAACTGA 2072
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2073 AAAAAACATATCCAAAATAATGAGGAAATGTGTTGGCTCACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGG 2146
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2147 GTTGCCTGTATCCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTTCTCCATGTG 2220
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2221 TTTGATTTCTCCTCAGGCTGGTAGCAAGTTCTGGATCTTATACCCAACACACAGCAACATCCAGAAATAAAGAT 2294
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2295 CTCAGGACCCCCCAGCAAGTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACCTGTCT 2368
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2369 TTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGCTTCCCTGGACTCAACTTCCTAA 2442
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2443 AGGCATGTGAGGAAGGGGTAGATTCCACAATCTAATCCGGGTGCCATCAGAGTAGAGGGAGTAGAGAATGGATG 2516
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2517 TTGGGTAGGCCATCAATAAGGTCCATTCTGCGCAGTATCTCAACTGCCGTTCAACAATCGCAAGAGGAAGGTGG 2590
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2591 AGCAGGTTTCTTCATCTTACAGTTGAGAAAACAGAGACTCAGAAGGGCTTCTTAGTTCATGTTTCCCTTAGCGC 2664
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2665 CTCAGTGATTTTTTCATGGTGGCTTAGGCCAAAAGAAATATCTAACCATTCAATTTATAAATAATTAGGTCCCC 2738
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2739 AACGAATTAAATATTATGTCCTACCAACTTATTAGCTGCTTGAAAAATATAATACACATAAATAAAAAAATATA 2812
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2813 TTTTTCATTTCTATTTCATTGTTAATCACAACTACTTACTAAGGAGATGTATGCACCTATTGGACACTGTGCAA 2886
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2887 CTTCTCACCTGGAATGAGATTGGACACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCATATAGTACTTGA 2960
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2961 TTTTTTATCAGATGGCCTGGAAAACCCAGTCTCACAAAAATATGAAATTATCAGAAGGATTATAGTGCAATCTT 3034
Query 379 -------------------------------------------------------------------------- 378
Sbjct 3035 ATGTTGAAAGAATGAACTACCTCACTAGTAGTTCACGTGATGTCTGACAGATGTTGAGTTTCATTGTGTTTGTG 3108
Query 379 -------------------------------------------------------------------------- 378
Sbjct 3109 TGTTCAAATTTTTAAATATTCTGAGATACTCTTGTGAGGTCACTCTAATGCCCTGGGTGCCTTGGCACAGTTTT 3182
Query 379 -------------------------------------------------------------------------- 378
Sbjct 3183 AGAAATACCAGTTGAAAATATTTGCTCAGGAATATGCAACTAGGAAGGGGCAGAATCAGAATTTAAGCTTTCAT 3256
Query 379 -------------------------------------------------------------------------- 378
Sbjct 3257 ATTCTAGCCTTCAGTCTTGTTCTTCAACCATTTTTAGGAACTTTCCCATAAGGTTATGTTTTCCAGCCCAGGCA 3330
Query 379 -------------------------------------------------------------------------- 378
Sbjct 3331 TGGAGGATCACTTGAGGCCAAGAGTTCGAGACCAGCCTGGGGAACTTGGCTGGACCTCCGTTTCTACGAAATAA 3404
Query 379 -------------------------------------------------------------------------- 378
Sbjct 3405 AAATAAAAAAATTATCCAGGTATGGTGGTGTGTGCCTGTAGTCCTATCTACTCAAGGGTGGGGCAGGAGGATCA 3478
Query 379 -------------------------------------------------------------------------- 378
Sbjct 3479 CTTGAGCCCAGGAATTTGAGGCCACAGTGAATTAGGATTGCACCACTGCACTCTAGCCCAGGCAACAGAACAAG 3552
Query 379 ------------------------------------------------------------ 378
Sbjct 3553 AACCTGTCTCTAAATAAATAAATAAAAATAATAATAATAAAAAAGATGTTTTCCCTACAA 3612
