Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13049
- Subject:
- XR_871718.2
- Aligned Length:
- 1999
- Identities:
- 1061
- Gaps:
- 791
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAGCCGGGCAGGGGGGCGGATTCGGCAGTAGCAACTCCCCGGACGCACGCAGGCCTCAGAGCCCCCCAGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGTGGCCCCTCGGCCCTGAAACTTGAAGCAGGGTAGGGGTCCAGCATGAAGCCCCCGGACCGCCCCACCCCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCGCACTGACCGGATACTGGGGGTCATGGGTGGCATGCTGCGCGCATGCGCCGTACCCGGGCAGGAGGGGCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGGAGAGAGATCCCTTAGGGCCTGGGAGTACCAAGACAGAGAGTGATTGTATCGAGGAGGATCAGACAGGGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCGCGAACCTGAGGTCCTCGCCTGGGCTCCGCAGCCCGAATCCTATTCTATTGCCGTCAGTGAGGGGAGCATGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGCGTCTGCTGTCTCGGGGCTGGCTGCCCTGTCTGGCCCCAGCTCTGGCCTCAGCTCTGATCCGTGTTCTCCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTCCCCCTGGACCAGTAACTGGCCTGAGGAGATGGTTGGATCATTCCAAACATTGTCTCAGTGTGGAAACTGA 518
Query 1 ------------------------ATGT-------------TGGAGCCAGCTCTAGCCACAGGAGAGGAGCTGC 37
|||| ||||||||.||.||.||||||||.|.|||||||
Sbjct 519 GGCAGAGAGTGGTCAGACCGGACAATGTGAGAACTGGACGCTGGAGCCAACTTTAACCACAGGACAAGAGCTGC 592
Query 38 CGGAACTGACCTTGCTGACCACACTGTTGGAGGGCCCTGGAGATAAGACGCAGCCACCTGAAGAGGAGACTTTG 111
|.|||||||||||.|||||.|||.||.|||||||.||||||||.|||.|.||||||.||||||||||.||||||
Sbjct 593 CCGAACTGACCTTACTGACTACATTGCTGGAGGGTCCTGGAGACAAGGCACAGCCAGCTGAAGAGGAAACTTTG 666
Query 112 TCCCAAGCCCCTGAGAGTGAGGAGGAACAGAAGAAGAAGGCTCTGGAAAGGAGTATGTATGTCCTGAGTGAACT 185
||||||||.||..|||.||||||.||.||||||||||.||||||||||||||||||||.|||||||.||||.||
Sbjct 667 TCCCAAGCTCCCAAGAATGAGGAAGAGCAGAAGAAGATGGCTCTGGAAAGGAGTATGTTTGTCCTGGGTGAGCT 740
Query 186 GGTAGAAACAGAGAAAATGTACGTGGACGACTTGGGGCAGATTGTGGAGGGTTATATGGCCACCATGGCTGCTC 259
|||.||||||||.|.||..||.||||||||||||||.|||||.||.||||||||.|||||.|||||||||.|||
Sbjct 741 GGTGGAAACAGAAAGAACATATGTGGACGACTTGGGACAGATCGTAGAGGGTTACATGGCTACCATGGCTACTC 814
Query 260 AGGGGGTCCCCGAGAGTCTTCGAGGCCGTGACAGGATTGTGTTTGGGAATATCCAGCAAATCTATGAGTGGCAC 333
|||||||.||.||||||||.|||||.|||||||||||||||||||||||.||.|||||.|||||||||||||||
Sbjct 815 AGGGGGTACCTGAGAGTCTCCGAGGTCGTGACAGGATTGTGTTTGGGAACATTCAGCAGATCTATGAGTGGCAC 888
Query 334 CGAGACTATTTCTTGCAAGAGCTACAACGGTGTCTGAAAGATCCTGATTGGCTGGCTCAGCTATTCATCAAACA 407
||||||||.|||.||||.|||||.||.|.||||.||||||||||.||||||.||||||||||.|||||||||||
Sbjct 889 CGAGACTACTTCCTGCAGGAGCTGCAGCAGTGTTTGAAAGATCCCGATTGGTTGGCTCAGCTGTTCATCAAACA 962
Query 408 CGAGCGCCGGCTGCATATGTATGTGGTGTACTGTCAGAATAAGCCCAAGTCAGAGCATGTGGTGTCAGAGTTTG 481
.||||||||.|||||||||||||||||||||||.||||||||.||||||||||||||||||.||||||||||||
Sbjct 963 TGAGCGCCGACTGCATATGTATGTGGTGTACTGCCAGAATAAACCCAAGTCAGAGCATGTGCTGTCAGAGTTTG 1036
Query 482 GGGACAGCTACTTTGAGGAGCTCCGGCAGCAGCTGGGGCACCGCCTGCAGCTGAACGACCTCCTCATCAAACCT 555
||||||||||||||||||||||..|||||||||||||.|||||.||||||||.||.|||||||||||.|||||.
Sbjct 1037 GGGACAGCTACTTTGAGGAGCTGAGGCAGCAGCTGGGACACCGACTGCAGCTCAATGACCTCCTCATTAAACCA 1110
Query 556 GTGCAGCGGATCATGAAATACCAGCTGCTGCTCAAGGATTTTCTCAAGTATTACAATAGAGCTGGGATGGATAC 629
||||||||.|||||||||||||||.|||||||.|||||||||||.||||||||||..||||||||||.||||||
Sbjct 1111 GTGCAGCGAATCATGAAATACCAGTTGCTGCTGAAGGATTTTCTAAAGTATTACAGAAGAGCTGGGAAGGATAC 1184
Query 630 TGCAGACCTAGAGCAAGCTGTGGAGGTCATGTGCTTTGTGCCCAAGCGCTGCAACGATATGATGACGCTGGGGA 703
||.|||.||.|||||||||||||||||||||||.||.||.||.|||||.|||||.|||||||||.|.|||||||
Sbjct 1185 TGAAGAGCTGGAGCAAGCTGTGGAGGTCATGTGTTTCGTACCTAAGCGATGCAATGATATGATGTCCCTGGGGA 1258
Query 704 GATTGCGGGGATTTG----------------------AGGGCAAACTGACTGCTCAGGGGAAGCTCTTGGGCCA 755
||.|.|||||||||| ||||.||||||||||||||||||||||||||||||||
Sbjct 1259 GACTTCGGGGATTTGAGAGGCCATGTCCTTCGGTTCCAGGGAAAACTGACTGCTCAGGGGAAGCTCTTGGGCCA 1332
Query 756 GGACACTTTCTGGGTCACCGAGCCTGAGGCTGGAGGGCTGCTATCTTCCCGAGGTCGAGAGAGGCGCGTCTTCC 829
||||||.||||.|||.||.||||||||.|||||.||.|||||.||||||||.|||||.||||||||.|||||||
Sbjct 1333 GGACACATTCTTGGTTACAGAGCCTGAAGCTGGGGGTCTGCTTTCTTCCCGGGGTCGGGAGAGGCGTGTCTTCC 1406
Query 830 TCTTTGAGCAAATCATCATCTTCAGTGAAGCCCTGGGAGGAGGAGTGAGAGGTGGAACACAGCCTGGATATGTA 903
|.||.|||||||||||||||||||||||.||||||||||||||||...|||||||..|.||||||||.||.||.
Sbjct 1407 TGTTCGAGCAAATCATCATCTTCAGTGAGGCCCTGGGAGGAGGAGGCCGAGGTGGCGCGCAGCCTGGCTACGTG 1480
Query 904 TACAAGAACAGCATTAAGGTGAGCTGCCTGGGACTGGAGGGGAACCTCCAAGGTGACCCTTGCCGCTTTGCACT 977
||||||||||||||.||||||||||||||.||.|||||||||||.||||||||..||||||||||.|||||.||
Sbjct 1481 TACAAGAACAGCATCAAGGTGAGCTGCCTAGGGCTGGAGGGGAATCTCCAAGGCAACCCTTGCCGGTTTGCGCT 1554
Query 978 GACCTCCAGAGGGCCAGAGGGTGGGATCCAGCGCTATGTCCTGCAGGCTGCAGACCCTGCTATCAGTCAGGCCT 1051
||||||.|||||||||||.|||||||||||||||||.||.|||||||||.|||||||||||.|||||||.||||
Sbjct 1555 GACCTCTAGAGGGCCAGAAGGTGGGATCCAGCGCTACGTTCTGCAGGCTTCAGACCCTGCTGTCAGTCAAGCCT 1628
Query 1052 GGATCAAGCATGTGGCTCAGATCTTGGAGAGCCAACGGGACTTCCTCAACGCATTGCAGTCACCCATTGAGTAC 1125
||||.|||||.|||||.||||||.||||.|||||.||.|||||.|||||||||||.||||||||||||||.|||
Sbjct 1629 GGATAAAGCAAGTGGCCCAGATCCTGGAAAGCCAGCGTGACTTTCTCAACGCATTACAGTCACCCATTGAATAC 1702
Query 1126 CAGAGACGGGAGAGCCAGACCAACAGCCTGGGGCGGCCAAGAGGGCCTGGAGTGGGGAGCCCTGGAAGAATTCG 1199
||||||||.||||||||||||||.|||||||||||.|||.||||||||.|.||.|||||||||||.|||||.||
Sbjct 1703 CAGAGACGTGAGAGCCAGACCAATAGCCTGGGGCGACCAGGAGGGCCTTGGGTAGGGAGCCCTGGGAGAATGCG 1776
Query 1200 GCTTGGAGATCAGGCCCAGGGCAGCACACACACACCCATCAATGGCTCTCTCCCCTCTCTGCTGCTGTCACCCA 1273
||.||||||
Sbjct 1777 GCCTGGAGA----------------------------------------------------------------- 1785
Query 1274 AAGGGGAGGTGGCCAGAGCCCTCTTGCCACTGGATAAACAGGCCCTTGGTGACATCCCCCAGGCTCCCCATGAC 1347
Sbjct 1786 -------------------------------------------------------------------------- 1785
Query 1348 TCTCCTCCAGTCTCTCCAACTCCAAAAACCCCTCCCTGCCAAGCCAGACTTGCCAAGCTGGATGAAGATGAGCT 1421
Sbjct 1786 -------------------------------------------------------------------------- 1785
Query 1422 G 1422
Sbjct 1786 - 1785
