Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13061
Subject:
XM_017029254.2
Aligned Length:
1804
Identities:
1355
Gaps:
425

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTGTCTCCGCATCTCCAGTGATCTCTGCAACTTCCAGCGGCGCCGGCGTCCCGGGGGGCTTATTCCGGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGAACCCCTGTACTCGACTCCCAGAGAGCCCCCTCGTCTTACTCCTAATATGATCAATAGTTTCGTGGTTAATA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACCACAGCAACAGTGCCGGAGGCGGCGGCAGGGGCAACACCAACACCAACGAGTGCCGCATGGTCGACATGCAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGATGAAGGTGGCTTCGTTCCTGATGGACGGCCAGGAACTGATCTGCCTGCCGCAAGTCTTTGATCTTTTTCT  296

Query    1  ----------ATGCCAGAGTTTCGCTCTGT-TGC-CCAGGCTGCAGTG--------------CAGTGGTGT---  45
                      .||..||..||.|.|.|||| |.| |||.||||.||.|              |.|||||||   
Sbjct  297  CAAGCACCTGGTGGGAGGCTTGCACACTGTGTACACCAAGCTGAAGAGACTGGATATATCCCCCGTGGTGTGTA  370

Query   46  ----------------GATCTT-----GGCT-------------------------CGCTGC-AACTTCCGCCT  72
                            ||||.|     ||||                         |||||| ||||    |.|
Sbjct  371  CTGTTGAGCAGGTCCGGATCCTCCGCGGGCTGGGGGCCATCCAGCCCGGGGTAAACCGCTGCAAACT----CAT  440

Query   73  C-CCAGGTTCAAGGGATTC------TTGTGCCTCAGCCTCCCGAGTAGCTGGAATTACAGTTCAAGACCCGGCA  139
            | |||||   ||.|..|||      ||||   |||     |||| |.||...|||..|||||||||||||||||
Sbjct  441  CACCAGG---AAAGACTTCGAAACTTTGT---TCA-----CCGA-TTGCACCAATGCCAGTTCAAGACCCGGCA  502

Query  140  GGCCCCCTAAGCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCTTCTGACCCATGCAGTCCCAGGCCTCTTA  213
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  503  GGCCCCCTAAGCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCTTCTGACCCATGCAGTCCCAGGCCTCTTA  576

Query  214  TCGCCAGGACTTATCACTCCGACAGGTATAACAGCTGCAGCGATGGCTGAGGCGATGAAACTTCAGAAGATGAA  287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  577  TCGCCAGGACTTATCACTCCGACAGGTATAACAGCTGCAGCGATGGCTGAGGCGATGAAACTTCAGAAGATGAA  650

Query  288  GCTTATGGCTATGAACACTCTTCAGGGAAATGGAAGCCAAAATGGGACCGAATCAGAGCCTGATGATCTTAATT  361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  651  GCTTATGGCTATGAACACTCTTCAGGGAAATGGAAGCCAAAATGGGACCGAATCAGAGCCTGATGATCTTAATT  724

Query  362  CTAACACAGGTGGAAGTGAATCCTCCTGGGATAAAGATAAGATGCAGTCTCCATTTGCTGCACCTGGACCCCAA  435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  725  CTAACACAGGTGGAAGTGAATCCTCCTGGGATAAAGATAAGATGCAGTCTCCATTTGCTGCACCTGGACCCCAA  798

Query  436  CATGGAATTGCTCATGCAGCCCTAGCTGGCCAGCCAGGCATTGGGGGTGCTCCAACCCTCAATCCACTGCAGCA  509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  799  CATGGAATTGCTCATGCAGCCCTAGCTGGCCAGCCAGGCATTGGGGGTGCTCCAACCCTCAATCCACTGCAGCA  872

Query  510  GAACCACCTGCTAACCAATAGACTGGATCTGCCATTTATGATGATGCCTCATCCCCTACTTCCAGTCAGCTTAC  583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  873  GAACCACCTGCTAACCAATAGACTGGATCTGCCATTTATGATGATGCCTCATCCCCTACTTCCAGTCAGCTTAC  946

Query  584  CTCCTGCATCAGTTGCCATGGCAATGAATCAGATGAACCATCTCAATACTATTGCCAACATGGCTGCTGCAGCA  657
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  947  CTCCTGCATCAGTTGCCATGGCAATGAATCAGATGAACCATCTCAATACTATTGCCAACATGGCTGCTGCAGCA  1020

Query  658  CAGATTCACAGTCCACTCTCCAGAGCTGGTACCTCTGTTATAAAGGAGCGGATCCCAGAGAGTCCTTCTCCTGC  731
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021  CAGATTCACAGTCCACTCTCCAGAGCTGGTACCTCTGTTATAAAGGAGCGGATCCCAGAGAGTCCTTCTCCTGC  1094

Query  732  TCCTTCTCTAGAAGAGAATCATCGTCCTGGGAGCCAGACCTCTTCCCACACCAGCAGCAGTGTGTCCAGCTCTC  805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1095  TCCTTCTCTAGAAGAGAATCATCGTCCTGGGAGCCAGACCTCTTCCCACACCAGCAGCAGTGTGTCCAGCTCTC  1168

Query  806  CCTCTCAGATGGATCATCATTTGGAAAGAATGGAAGAGGTACCAGTTCAAATTCCAATAATGAAGTCACCCTTG  879
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1169  CCTCTCAGATGGATCATCATTTGGAAAGAATGGAAGAGGTACCAGTTCAAATTCCAATAATGAAGTCACCCTTG  1242

Query  880  GACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCT  953
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1243  GACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCT  1316

Query  954  GTCCTCCGTGGAGACTCTGTTGACCAACATTCAG------------------------------GGTCTGCTGA  997
            ||||||||||||||||||||||||||||||||||                              ||||||||||
Sbjct 1317  GTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGTCAACAATATTTCTATAAACAAAATAAATGGTCTGCTGA  1390

Query  998  AAGTTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGATTCAACAAGAAAAGAAGGAGCTGCGACTGGAGCTC  1071
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1391  AAGTTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGATTCAACAAGAAAAGAAGGAGCTGCGACTGGAGCTC  1464

Query 1072  TATAGAGAGAGAGAAATTAGAGAAAACCTTGAAAGACAACTTGCAGTTGAGCTTCAAAGCAGAACTACTATGCA  1145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1465  TATAGAGAGAGAGAAATTAGAGAAAACCTTGAAAGACAACTTGCAGTTGAGCTTCAAAGCAGAACTACTATGCA  1538

Query 1146  AAAGCGCCTGAAGAAGGAGAAAAAAACCAAGAGAAAATTGCAGGAAGCCTTGGAATTTGAATCAAAGCGCCGGG  1219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1539  AAAGCGCCTGAAGAAGGAGAAAAAAACCAAGAGAAAATTGCAGGAAGCCTTGGAATTTGAATCAAAGCGCCGGG  1612

Query 1220  AGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATT  1293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1613  AGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATT  1686

Query 1294  CCAGATATTGAAATAGAAAACAATGGGACTCCTCATGATAGTGCTGCTATGCAAGGAGGTAACTATTACTGTTT  1367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1687  CCAGATATTGAAATAGAAAACAATGGGACTCCTCATGATAGTGCTGCTATGCAAGGAGGTAACTATTACTGTTT  1760

Query 1368  AGAAATGGCACAACAGTTGTATTCAGCC  1395
            ||||||||||||||||||||||||||||
Sbjct 1761  AGAAATGGCACAACAGTTGTATTCAGCC  1788

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