Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13145
- Subject:
- XM_030252485.1
- Aligned Length:
- 2595
- Identities:
- 1072
- Gaps:
- 1365
Alignment
Query 1 ATGAACCTCCGGTCCCTGGGGACCCACAGAGGTGTGTCTGCTGTGGCTGGTCCACATGACATTGGTGCTTCGCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGGTGACAAAAAGTCAAAGAACAGGTCCACACGAGGGAAGAAAAAGAGCATATTTGAAACTTACATGTCCAAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGGATGTTTCAGAAGGCTTGAAGAGAGGAACACTCATCCAGGGTGTATTGAGAATTAATCCAAAGAAGTTTCAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAAGCCTTCATTCCTTCCCCGGATGGTGATCGAGACATTTTTATTGATGGGGTTGTTGCTCGTAATAGAGCCTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AAATGGGGATCTGGTGGTCGTGAAACTGCTTCCCGAGGAGCATTGGAAGGTAGTTAAACCAGAGAGCAATGACA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AAGAAACAGAAGCTGCGTATGAATCAGATATCCCCGAGGAGCTCTGTGGACACCATCTCCCGCAACAGTCCCTG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AAAAGCTATAATGACAGTCCTGATGTCATTGTAGAGGCTCAGTTTGATGGCAGCGACTCAGAAGATGGACATGG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CATCACACAAAATGTGCTGGTTGATGGTGTTAAGAAACTCTCAGTTTGTGTTTCTGAGAAAGGAAGAGAGGATG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GTGATGCACCGGTTACAAAAGATGAGACCACCTGCATTTCACAAGACACAAGAGCTTTATCGGAGAAATCCCTG 666
||| ||||||||||.||||..|||..||||.||||||||||..|||||.|||||.||.||.
Sbjct 1 ---ATG-----------AAAGATGAGAACACCCCCATACCACAGGACACAAGAGGCTTATCAGAGAAGTCACTT 60
Query 667 CAAAGATCAGCAAAGGTGGTTTACATCTTGGAGAAAAAACATTCTCGAGCAGCAACCGGCTTCCTCAAACTCTT 740
||.|.|||||||||||||||||||||||||||||||||.|||||||||||||||||.|||.||||.||||||||
Sbjct 61 CAGAAATCAGCAAAGGTGGTTTACATCTTGGAGAAAAAGCATTCTCGAGCAGCAACTGGCATCCTGAAACTCTT 134
Query 741 GGCTGATAAGAACAGCGAACTGTTTAGGAAATACGCCCTGTTTTCTCCCTCAGACCACCGAGTGCCTAGAATTT 814
|||||||||||||||.||.|||||||.|||||||||||||||||||||.||||||||||||||.||||||||||
Sbjct 135 GGCTGATAAGAACAGTGACCTGTTTAAGAAATACGCCCTGTTTTCTCCTTCAGACCACCGAGTACCTAGAATTT 208
Query 815 ATGTGCCTCTCAAGGACTGTCCCCAGGACTTTGTGGCACGGCCTAAAGATTATGCCAACACACTGTTCATCTGC 888
|.||.||||||||||||||||||||||||||..||.|.||.||||||||.|.|||||||||.||||||||||||
Sbjct 209 ACGTACCTCTCAAGGACTGTCCCCAGGACTTCATGACCCGACCTAAAGACTTTGCCAACACGCTGTTCATCTGC 282
Query 889 CGCATTGTGGACTGGAAGGAGGACTGCAATTTTGCCCTGGGGCAGCTGGCTAAGAGTCTTGGGCAGGCTGGTGA 962
|||||..|.|||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 283 CGCATCATAGACTGGAAGGAGGACTGTAATTTTGCCCTGGGGCAACTGGCTAAGAGTCTTGGGCAGGCTGGTGA 356
Query 963 AATTGAGCCTGAAACAGAAGGAATACTAACAGAGTATGGCGTGGATTTCTCTGATTTCTCTTCAGAAGTTCTAG 1036
|||.|||||||||||||||||.|||||.|||||.|||||.|||||.||||||||||||||||||||||||||.|
Sbjct 357 AATCGAGCCTGAAACAGAAGGGATACTGACAGAATATGGTGTGGACTTCTCTGATTTCTCTTCAGAAGTTCTTG 430
Query 1037 AATGTCTTCCTCAAGGCCTGCCATGGACAATTCCACCAGAGGAGTTCAGCAAGAGAAGGGATTTAAGAAAAGAC 1110
|||||||.||||||.|||||||.||||||||.|||||.||.|||.|..||||||||||.||..||||.||||||
Sbjct 431 AATGTCTCCCTCAAAGCCTGCCCTGGACAATCCCACCTGATGAGGTGGGCAAGAGAAGAGACCTAAGGAAAGAC 504
Query 1111 TGTATCTTCACCATTGACCCATCAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGG 1184
|||||||||||||||||.||||||||.||.||.|||||.||||||||||||.||||||.||..|||.||||.||
Sbjct 505 TGTATCTTCACCATTGATCCATCAACTGCTCGCGACCTTGATGATGCCCTCGCCTGCAGGCGGCTCACTGATGG 578
Query 1185 CAACTTCAAAGTGGGAGTTCACATTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGG 1258
||.||||.|||||||.||.|||||.||.||.|||||||||||||||||.||||||||...|.||||||||||.|
Sbjct 579 CACCTTCGAAGTGGGCGTCCACATCGCCGATGTGAGTTACTTTGTTCCTGAGGGATCCTCTTTGGATAAAGTAG 652
Query 1259 CTGCCGAGAGGGCTACAAGCGTCTACTTGGTTCAAAAGGTGGTCCCCATGCTTCCCAGGCTGCTGTGTGAGGAG 1332
||||.|||||.||.|||||.|||||||||||.||.||||||||||||||||||||||||||.|||||||||||.
Sbjct 653 CTGCTGAGAGAGCCACAAGTGTCTACTTGGTCCAGAAGGTGGTCCCCATGCTTCCCAGGCTTCTGTGTGAGGAA 726
Query 1333 CTGTGCAGCCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCAGAGGGCAAGAT 1406
||.||||||||||||||||||.|.||||||||||||||||||||||||||||..|||||.||.||.||||||||
Sbjct 727 CTCTGCAGCCTCAACCCCATGACTGACAAGCTGACCTTCTCTGTGATCTGGAAGCTGACCCCTGAAGGCAAGAT 800
Query 1407 CCTTGATGAATGGTTTGGCCGGACCATCATCCGCTCCTGCACCAAACTTAGCTACGAGCATGCACAGAGCATGA 1480
||||||.||.|||||||||||.||.||||||||.||.|||||||||||.||||||||.|||||.||||||||||
Sbjct 801 CCTTGAAGAGTGGTTTGGCCGCACTATCATCCGTTCTTGCACCAAACTGAGCTACGACCATGCCCAGAGCATGA 874
Query 1481 TTGAAAGCCCAACTGAGAAAATCCCTGCGAAAGAGCTGCCCCCCATTTCCCCAGAGCATAGCAGCGAGGAGGTA 1554
|.||||..|||||||||||.|||||||.|.|||||||.|||||.|||||.||||||||.|||..|||||||||.
Sbjct 875 TCGAAAATCCAACTGAGAAGATCCCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGCACAGCGTCGAGGAGGTG 948
Query 1555 CACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGCACTTCG 1628
||||||||.|||.||||.||.|||.|.|||||.|||||..|.||||..|||||||||||.||.||||||||.||
Sbjct 949 CACCAGGCAGTCCTGAACCTGCACAGCATTGCAAAGCAACTCCGCCGCCAGCGCTTTGTAGATGGCGCACTCCG 1022
Query 1629 TTTGGATCAGCTAAAGCTTGCTTTCACTCTGGACCACGAGACCGGATTGCCTCAAGGATGTCATATCTATGAGT 1702
|||.||||||||.|||||||||||.|||||||||||.|||||.|||.||||||||||||||||.||||||||||
Sbjct 1023 TTTAGATCAGCTGAAGCTTGCTTTTACTCTGGACCATGAGACTGGACTGCCTCAAGGATGTCACATCTATGAGT 1096
Query 1703 ACCGCGAGAGCAACAA---------------------------------------------------------- 1718
||||.||.||||||||
Sbjct 1097 ACCGAGACAGCAACAAGCTTGTAGAGGAGTTCATGCTCCTGGCCAACATGGCGGTGGCCCACAAGATCTTCCGC 1170
Query 1719 ---------------GCCCTGCTGCGCCGGCACCCCCCGCCCCAAACAAGGATGCTCAGTGACCTGGTGGAATT 1777
|||||||||||||||||.|||||.||.||.||.|.|||||||||||||||||||||.||
Sbjct 1171 ACCTTCCCTGAGCAGGCCCTGCTGCGCCGGCATCCCCCACCACAGACGAAGATGCTCAGTGACCTGGTGGAGTT 1244
Query 1778 CTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGAGCCCTCAATAAAAGCC--------------- 1836
|||.||||||||||||||||||.||||..|||||||.|||||.|||||.||||||||||
Sbjct 1245 CTGTGACCAGATGGGGCTGCCCATGGATGTCAGCTCTGCAGGGGCCCTAAATAAAAGCCTGACTAAGACATTTG 1318
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1319 GAGATGACAAGTACTCTCTGGCCCGGAAGGAGGTGCTCACCAACATGTACTCCCGGCCCATGCAGATGGCACTG 1392
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1393 TACTTCTGCTCTGGGATGCTGCAGGACCAGGAGCAGTTCCGGCATTATGCTCTCAACGTTCCCCTCTACACACA 1466
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1467 CTTCACCTCTCCCATCCGCCGCTTTGCTGACGTCATAGTGCACCGCCTCCTGGCTGCTGCTCTGGGCTACAGTG 1540
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1541 AACAGCCAGATGTGGAGCCTGATACCCTACAGAAGCAAGCTGACCACTGCAATGACCGTCGCATGGCTTCCAAA 1614
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1615 CGTGTGCAGGAGCTCAGCATCGGCCTCTTCTTCGCAGTTCTAGTAAAGGAGAGTGGCCCCCTGGAGTCCGAAGC 1688
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1689 CATGGTGATGGGTGTCCTGAACCAAGCTTTCGACGTGCTGGTGCTGCGCTTTGGGGTGCAGAAGCGCATCTACT 1762
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1763 GCAATGCACTGGCCCTGCGATCCTACAGCTTCCAGAAGGTGGGGAAGAAGCCAGAGCTCACTCTTGTTTGGGAG 1836
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1837 CCTGATGACCTTGAAGAGGAGCCAACACAGCAGGTCATCACCATCTTCAGCCTGGTGGATGTGGTCCTGCAGGC 1910
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1911 AGAGGCCACAGCCCTCAAGTACAGTGCTATCCTGAAGCGACCAGGCCTGGAGAAGGCGTCTGATGAGGAGCCTG 1984
Query 1837 ----- 1836
Sbjct 1985 AGGAC 1989
