Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13193
- Subject:
- NR_156454.1
- Aligned Length:
- 2515
- Identities:
- 390
- Gaps:
- 2113
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCCGCCGCTTGGCTTCTTTCACACGGGTTGCTTCGGAGGAATCCGCCGTGCAAATCTGTCCGCCCCCTTGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTGATCCCCCGAAGAGCTTCTGTCGCCGCTCTAGGAATAGAGACATTGAAGTTTGGGACAAGATATTTATCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACTTCTGTGTCAAAATTAGCGACCTGCTATGGCAATGAAGAAAGAAACTGAATTTGTCATTTTCACCTGAAGAA 222
Query 1 --ATGATAGACAAAAATCAAACCTGTGGTGTAGGACAGGATTCTGTGCCCTATATGATTTGTCTGATTCACATA 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAATGATAGACAAAAATCAAACCTGTGGTGTAGGACAGGATTCTGTGCCCTATATGATTTGTCTGATTCACATA 296
Query 73 CTCGAAGAATGGTTTGGTGTGGAGCAGTTGGAGGACTATTTGAATTTTGCAAACTATCTCTTGTGGGTTTTTAC 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTCGAAGAATGGTTTGGTGTGGAGCAGTTGGAGGACTATTTGAATTTTGCAAACTATCTCTTGTGGGTTTTTAC 370
Query 147 ACCACTAATACTTTTAATACTTCCTTACTTTACTATCTTTCTTCTCTACCTTACTATTATTTTCTTACACATTT 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACCACTAATACTTTTAATACTTCCTTACTTTACTATCTTTCTTCTCTACCTTACTATTATTTTCTTACACATTT 444
Query 221 ATAAGAGAAAGAATGTATTGAAAGAAGCCTACTCTCATAATTTATGGGATGGTGCAAGGAAAACAGTGGCAACT 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATAAGAGAAAGAATGTATTGAAAGAAGCCTACTCTCATAATTTATGGGATGGTGCAAGGAAAACAGTGGCAACT 518
Query 295 CTGTGGGATGGACATGCAGCCGTTTGGCATGGT----AAG--CAAGG----------ATAC------------- 339
||||||||||||||||||||||||||||||||| ||| ||.|| ||||
Sbjct 519 CTGTGGGATGGACATGCAGCCGTTTGGCATGGTTATGAAGTTCATGGAATGGAAAAAATACCAGAAGATGGACC 592
Query 340 -------------TTTCACCTTTG---TGTTGCCA--------------TTCATGTGTGCT------------- 370
|||.|.|.|.| |.||.|.| |||||| |||
Sbjct 593 AGCACTTATAATTTTTTATCATGGAGCTATTCCTATAGATTTTTACTATTTCATG---GCTAAAATATTTATAC 663
Query 371 ------GCA----TTG--GA-------------ACTGTG---TTACCATTCC-------ATTTTATT----GAT 405
||| ||| || |||.|| |||..||||| |.|||||| |||
Sbjct 664 ACAAAGGCAGAACTTGCCGAGTAGTAGCTGATCACTTTGTCTTTAAAATTCCAGGGTTTAGTTTATTACTGGAT 737
Query 406 -------------------------------------------------------------------------- 405
Sbjct 738 GTGTTTTGTGCTCTACATGGACCAAGAGAAAAATGTGTTGAAATTCTGAGGAGTGGCCACTTGTTAGCTATCTC 811
Query 406 -------------------------------------------------------------------------- 405
Sbjct 812 ACCAGGTGGAGTTCGAGAAGCCCTAATTAGTGATGAAACTTATAACATCGTATGGGGTCATCGCAGAGGCTTTG 885
Query 406 -------------------------------------------------------------------------- 405
Sbjct 886 CTCAGGTTGCAATTGATGCAAAAGTGGGTTATTTAGGTGGCTTTATGAAAAATTCCGCTATCCATTTGCTCCAA 959
Query 406 -------------------------------------------------------------------------- 405
Sbjct 960 TGTATGGAGGTTTTCCAGTGAAGTTACGGACCTATTTAGGCGACCCCATTCCGTATGACCCACAGATAACAGCG 1033
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1034 GAAGAATTAGCTGAAAAGACGAAGAATGCTGTTCAAGCTTTGATTGATAAGCACCAAAGAATACCAGGAAACAT 1107
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1108 TATGAGTGCTTTGTTAGAACGTTTTCATTGATAACAAAGGGTCAACTAGAAGATGATTTAGTACATTTATATTA 1181
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1182 AATGTTTGTATCTAAGGTACTGTCTTCTGAATTTTGTAGGTCCTATAATTAGTATTTTTTAAAAAAATCATGTT 1255
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1256 AATAAGCATCTTTCACAGAATTCGTTTCTTTAAAATAGTCAATTTTGTTTTTGCAATTGTGTCAAATACTAACA 1329
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1330 AATTACACACCTAGTAATTCAGAAAAAGATGTCTTATTTGTAAATTCCTAACAATTTATGCTAAACATATAGAT 1403
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1404 TCTTAAGTTTATTAATAACAGCAGTTTAGGTTAAACAAACATTCCTGGATAATGCGTTAAATTTCTGTATCTGT 1477
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1478 CGCCCTGAGCTGATTTTGAAAGATGGTATAAGCTAGGGGTTAGTATAGTTGTTTAAGTTAGAAAAAACATGCTG 1551
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1552 TTGTCTGCCCCTCATTCCCTTCATGACCTTGGGCAAGTCACGTAATGTTTTTGTGCCTCAACAATTCACTTTTT 1625
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1626 AAAAACATGATCGTATGATGAATGATATTATTTTGTTATTTATATTTACTGTGATTGATAACTGTTGAACCAAA 1699
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1700 ATAATAAAATAATTAATTTAAACAATGTCAAAATCCTTTAGCAGTTATGTATATATTTTCTCCATTGTGTGTTT 1773
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1774 AAATTATGTCATGTCCAGTTGCCAAGCACAATGAAAAAGATGTATTATTTTTTAAATTGAATAAAAAATTAGGA 1847
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1848 AAAATAAAATTTCTAATTATTATTTTTAGTATGATATTTTTAACAAGAGTCTATAGGCAAACAATATAGGGTGT 1921
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1922 GCTGTGCATTGTCAGCCCTATACTGTGGTCTTAATAATGCCAGCTTAAAAATCACTGTTGTGCTCTGCATTTCG 1995
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1996 TGTGTTAGAAGCTGATTCTAGGCTGAGGAAAGCAAGAGTTCTCTACTTTTGCTCAATATTGAGGCTTACCCAGT 2069
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2070 TTGACTCTACAGCCAGTGAAGTGGTTTATTGCTTCAATAAAAATATACTTGAATGATGAATTTATTTATGTTTT 2143
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2144 GTTTTGTTTTTATTTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATC 2217
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2218 CACCTGCCTCAGCCTCCCAACTTGCTGGGATTACAGGTGTGAGCCACCATGCCCAGCCTGAATGATGAATTTAT 2291
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2292 GTGAACACAAAGCCCTCTGAAAAATTAATGATTTTCAATTTGTTGTCTTCTTGAAAACTGAATTTAAGTATTAT 2365
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2366 TTAAACAGAAAAGTGTCAGAAATCAAATGCAGTATCTCCCTCTCCCTTTTTTAAATGTTGAATTAGTAGGGTTT 2439
Query 406 ------------------------------------------------------------------------- 405
Sbjct 2440 TTGTATAGCTTTTTGTATTGTGTGTATTTATGATATGTGAAATGTACATAAAATTAAACAATGTGAAAATAAA 2512
