Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13218
- Subject:
- NM_001271594.2
- Aligned Length:
- 1482
- Identities:
- 534
- Gaps:
- 942
Alignment
Query 1 ATGAACCGGGGCGGCGGCAGCCCGTCGGCCGCCGCCAACTACCTGCTCTGTACCAACTGCCGGAAAGTGCTGCG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GAAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGAGAAGGAAGTTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCCAAGCAAACACAGTGGATGAACGTACTAACTTTCTTGTGGAAGAATACTCTACATCCGGTCGTCTGGACAAC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 ATCACACAGGTCATGAGTTTACACACTCAGTACCTGGAGTCTTTCTTGCGGAGCCAGTTTTACATGTTGCGCAT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ------------ATGAGTTTACACACTCAGTACCTGGAGTCTTTCTTGCGGAGCCAGTTTTACATGTTGCGCAT 62
Query 297 GGATGGTCCCCTTCCTCTACCATACAGGCACTATATTGCAATAATGGCTGCAGCTAGACATCAGTGTTCTTACT 370
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 63 GGATGGTCCCCTTCCTCTACCATACAGGCACTATATTGCAATAAT----------------------------- 107
Query 371 TAATAAACATGCATGTGGATGAATTTTTAAAGACTGGAGGTATTGCTGAGTGGTTGAATGGTTTGGAATATGTG 444
Sbjct 108 -------------------------------------------------------------------------- 107
Query 445 CCACAAAGACTGAAAAATCTTAATGAAATTAATAAGCTGCTAGCACATCGACCTTGGCTGATCACAAAAGAGCA 518
Sbjct 108 -------------------------------------------------------------------------- 107
Query 519 CATTCAGAAACTTGTCAAAACTGGAGAAAATAATTGGTCTCTGCCTGAACTGGTACATGCTGTGGTCCTCCTGG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 108 ------GAAACTTGTCAAAACTGGAGAAAATAATTGGTCTCTGCCTGAACTGGTACATGCTGTGGTCCTCCTGG 175
Query 593 CACATTATCATGCTTTGGCAAGCTTTGTTTTTGGTAGTGGTATCAATCCAGAGAGAGATCCAGAAATCTCCAAT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 176 CACATTATCATGCTTTGGCAAGCTTTGTTTTTGGTAGTGGTATCAATCCAGAGAGAGATCCAGAAATCTCCAAT 249
Query 667 GGATTCAGGCTAATATCAGTCAACAATTTCTGCGTTTGTGATCTTGCTAATGACAACAACATAGAGAATGCATC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 250 GGATTCAGGCTAATATCAGTCAACAATTTCTGCGTTTGTGATCTTGCTAATGACAACAACATAGAGAATGCATC 323
Query 741 TCTTTCAGGCAGCAACTTTGGGATTGTGGATTCTCTAAGTGAGCTAGAGGCCTTAATGGAAAGGATGAAAAGAC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 324 TCTTTCAGGCAGCAACTTTGGGATTGTGGATTCTCTAAGTGAGCTAGAGGCCTTAATGGAAAGGATGAAAAGAC 397
Query 815 TTCAAGAAGAAAGGGAAGATGAAGAGGCGTCTCAAGAAGAAATGAGCACTCGTTTTGAAAAGGAGAAGAAAGAA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 398 TTCAAGAAGAAAGGGAAGATGAAGAGGCGTCTCAAGAAGAAATGAGCACTCGTTTTGAAAAGGAGAAGAAAGAA 471
Query 889 AGTCTTTTTGTGGTCTCTGGAGATACTTTTCATTCATTTCCTCATTCAGGTGCTTTTTTG-------------- 948
||||||||||||||||||||||||||||||||||||||||||||||||| .|||||
Sbjct 472 AGTCTTTTTGTGGTCTCTGGAGATACTTTTCATTCATTTCCTCATTCAG-----ATTTTGAGGATGACATGATT 540
Query 949 ----CACTTTTTTGCCTTT------------------------------------------------------- 963
|| |.|..||.||.|
Sbjct 541 ATAACA-TCTGATGTCTCTCGATATATTGAAGACCCTGGTTTTGGGTATGAAGACTTTGCCAGACGAGGAGAAG 613
Query 964 -------------------------------------------------------------------------- 963
Sbjct 614 AGCATTTGCCAACATTCCGAGCTCAGGACTATACCTGGGAAAATCATGGGTTCTCCCTGGTGAACAGACTTTAT 687
Query 964 -------------------------------------------------------------------------- 963
Sbjct 688 TCTGACATTGGACATCTTCTTGATGAAAAGTTTCGGATGGTCTACAATCTCACATATAACACTATGGCCACCCA 761
Query 964 -------------------------------------------------------------------------- 963
Sbjct 762 TGAGGATGTTGACACAACCATGCTGCGCAGAGCTTTATTTAACTATGTTCACTGTATGTTTGGAATCAGGTATG 835
Query 964 -------------------------------------------------------------------------- 963
Sbjct 836 ATGACTATGATTATGGAGAAGTTAATCAATTACTTGAAAGAAGCCTGAAGGTTTACATTAAGACAGTGACCTGC 909
Query 964 -------------------------------------------------------------------------- 963
Sbjct 910 TATCCTGAGAGAACTACAAAACGCATGTATGATAGTTACTGGCGGCAGTTCAAACACTCAGAAAAAGTTCATGT 983
Query 964 -------------------------------------------------------------------------- 963
Sbjct 984 CAATCTACTTTTAATGGAAGCACGAATGCAAGCTGAACTTCTTTATGCTCTTCGTGCCATAACTCGGCATTTGA 1057
Query 964 -- 963
Sbjct 1058 CC 1059
