Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13308
Subject:
XR_001746212.2
Aligned Length:
4422
Identities:
557
Gaps:
3863

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATCATGTGACCAGAAAATGGAGGCGAATCTGTATTTCCAGTTAACTGCTCAGAAGAGAGATGCTGAAGAGCTGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGTCGTGCATCCTTCTCACCCTCCGTTAGAAAGCCTCCTCTCATCCTCAGAAGACTACTGTCAGAGGATGTAGG  148

Query    1  -ATGGACATCCCCTTTGAAGAGGGCGTGCTGAGTCCCAGTGCTGCAGACATGAGGCCTGAACCTCCTAATTCTC  73
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AATGGACATCCCCTTTGAAGAGGGCGTGCTGAGTCCCAGTGCTGCAGACATGAGGCCTGAACCTCCTAATTCTC  222

Query   74  TGGATCTTAATGACACTCATCCTCGGAGAATCAAGCTCACAGCCCCAAATATCAATCTTTCTCTGGACCAAAGT  147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TGGATCTTAATGACACTCATCCTCGGAGAATCAAGCTCACAGCCCCAAATATCAATCTTTCTCTGGACCAAAGT  296

Query  148  GAAGGATCTATTCTCTCTGATGATAACTTGGACAGTCCTGATGAAATTGACATCAATGTGGATGAACTTGATAC  221
            ||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct  297  GAAGGATCTATTCTCTCTGATGATAACTTGGACAGTCCAGATGAAATTGACATCAATGTGGATGAACTTGATAC  370

Query  222  CCCCGATGAAGCAGATTCTTTTGAGTACACTGGCCATGAAGATCCCACAGCCAACAAAGATTCTGGCCAAGAGT  295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCCCGATGAAGCAGATTCTTTTGAGTACACTGGCCATGAAGATCCCACAGCCAACAAAGATTCTGGCCAAGAGT  444

Query  296  CAGAGTCTATTCCAGAATATACGGCCGAAGAGGAACGGGAGGACAACCGGCTTTGGAGGACAGTGGTCATTGGA  369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CAGAGTCTATTCCAGAATATACGGCCGAAGAGGAACGGGAGGACAACCGGCTTTGGAGGACAGTGGTCATTGGA  518

Query  370  GAACAAGAGCAGCGCATTGACATGAAGGTCATCGAGCCCTACAGGAGAGTCATTTCTCACGGAGGATACTATGG  443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GAACAAGAGCAGCGCATTGACATGAAGGTCATCGAGCCCTACAGGAGAGTCATTTCTCACGGAGGATACTATGG  592

Query  444  GGACGGTCTAAATGCCATCATTGTGTTTGCCGCCTGTTTTCTGCCAGACAGCAGTCGGGCGGATTACCACTATG  517
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGACGGTCTAAATGCCATCATTGTGTTTGCCGCCTGTTTTCTGCCAGACAGCAGTCGGGCGGATTACCACTATG  666

Query  518  TCATGGAAAATCTTTTCCTATATGTAATAAGTACTTTCACACTACAGCCGCAGAGC------------------  573
            |||||||||||||||||||||||||||||||||||||              ||||.                  
Sbjct  667  TCATGGAAAATCTTTTCCTATATGTAATAAGTACTTT--------------AGAGTTGATGGTAGCTGAAGACT  726

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  727  ATATGATTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGGATGCCAGGGCTAGGCTGGATGAAGAAATGCTAC  800

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  801  CAGATGATTGACAGACGGTTGAGGAAGAATTTGAAATCATTCATCATTGTTCATCCATCTTGGTTCATCAGAAC  874

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  875  AATCCTTGCTGTGACACGACCTTTTATAAGTTCAAAATTCAGCAGTAAAATTAAATATGTCAATAGCTTATCAG  948

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  949  AACTCAGTGGGCTGATCCCAATGGATTGCATCCACATTCCAGAGAGCATCATCAAACTGGATGAAGAACTGAGG  1022

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1023  GAAGCATCAGAGGCAGCTAAGAAGTTGTGCTGTGTTCACTAAGAAGCAGAAGAGAGACGTGATTCGAGTGAGTT  1096

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1097  TTAGGCTTACTCCTCAGATACTTGGGAACCCATTTGACCTTCTGAAAAACAAGCTTTTCTTTAGTTATAAACAT  1170

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1171  CCATCTCAGTAAGTATTGACTTGAAGCTGAAAGAAAAGCCTTAGTTGGCCATGCTGGAAGAAGAGGATGCTTTT  1244

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1245  CTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT  1318

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1319  ACCTGGTGCCATTCTAAATTTCTAAGGGGAAAAATAGAAAGTTTGTTTACTCTTAAGATATTTTATGAAATTGT  1392

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1393  GTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCC  1466

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1467  ATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCTTAGACTGGTGTTTACCAGTAAGATACCTTTA  1540

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1541  ATCCACTGTTAAGTATGAGTGGATTTGTTTCCATAGATTAGCTGGATTTCCTTTTGGTGATTGCATTAGGTTTA  1614

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1615  AAGTACACAGGTCTCAACTCTCCCCAGGAAAGTTTCCCCTGTTTGACTCCACCTTTAAAATCCTAAGCCTGACT  1688

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1689  AGGACAGCCACAAACCACACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGAAT  1762

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1763  CTCCTTTAACTTCTCAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATTGGGCAT  1836

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1837  TATATTTTATGTAAATTGGTCTTTTAACATCATTTTCCTGATGAATGTTGGTGACCACCACATTGTGAAATTTA  1910

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1911  AGAATCCGTGTTGCATGTTTGGTAGCTCTCTGAGTTTCAGGCCATAAACTCAGCTCCAGAGGTTACCTTTTAAG  1984

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1985  TGCCAAGAACTCAAGTGCAAGGTGGCCTACTCAAAAATCATTTGGTAGCATTCAGTTATTCATGAATTCCTCTC  2058

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 2059  TCGCATGCATTATAAAAAGTGATCTGCTTTAAAACACCGTAATCTGATCATAGGCTTAAAATTAAATATGAGTA  2132

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 2133  TTACTTTCATGTACAAAATATTTCCTTTATAGTCTTCATATGCCCTTTAAAATGCCAACAAGATTTCAAGTCTG  2206

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 2207  TAGGCCTCTAGTGAGGTGGGGTGGCAAACCACAGCTAAGTCTCGCTCACCACTGCAAGCTAAGAATGGTTTTTA  2280

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 2281  CATTTTGGGTTGGAAAAATTTTTTTTGAATATTTCATGACACATGAAAATTATTCAAATGTTAGTGCCGATAAA  2354

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 2355  TAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACTGTCTACAGCTACTTTCACACTACAGCCGCA  2428

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 2429  GAGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATGTTTACAGAAAAAGTTTGCT  2502

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 2503  GACCCCTGCTCTAGCAAACGCATCCTTTCCTACTCCACCCCAATTTGTATTTAGATAGTTTCTCTAACAGAACG  2576

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 2577  GACAAATGAGGCTGCAAACTAATTTATTTTTGTCAAAAATCAATGTTTTGACATCCACAGACAGTGAAATAAAA  2650

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 2651  GAAATGGCTTGCTGAAAAACATGAGGAGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAG  2724

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 2725  CCTTCTTAGAAGCACTTCTTTAGTATATACAGGTGTTGGCTGAAGTCCGTGCCTCACTCTGGGAACCATTCTTA  2798

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 2799  GTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTC  2872

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 2873  TCATGGTGGAAAATTCATTGGGGAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACT  2946

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 2947  TTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTCACCTCTGTCTCCTCCCGTCCT  3020

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3021  TCCGCACGTGCCCACACACACGCAGTTCAGCCCTCTTTCCTCCATAAGCCTCCATCGTTTTCTCTTTTCTCCTC  3094

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3095  TTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCTGTTGGATCTCCTCCTTCATAACATCTGGCTTGT  3168

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3169  TGGACAGAAAAACCCTACAGCCCACCCCCTCCCACAGCCCACCTCCACTTTTGAAAGCCCAAATTACACCTCTC  3242

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3243  CCAGAACACAGTGTTGACGTAAATACAGTTACCCAATATTCCTGTTTGTTCACCTATTTGCTACTTTCACTCAG  3316

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3317  TAGCATCCCATTTTGTAAAATGAATTCCATGGTCACCCTGTCACAGGAAGTAATGAAAAATCCAGTGTTCAGTG  3390

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3391  TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGCCAAACAGACACAGCAACAAT  3464

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3465  CTCACCATTTATATATATATTTTTAACTTGTCCAGCTCATCTATGGAAAACTACTCAGGTGGTATGCTGTTTGA  3538

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3539  AGCCTCATCTTCCTACATGAAAATTATGGGCATTTGTCCCAATGATTTTGTTTCAGCTGTTCTGTAGGCTGCAT  3612

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3613  AACCACTCTGATATTTAGGTATCTGCTATTTTATTATCTTAAAAGACAAATTAATTTAATTGCATGTGCTAGGG  3686

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3687  AAAAGCTACCATGTACATTCACCCCAAGTAAATAGAATCCTAGATGAATCCTAGAAAAATAATCCCTAAGCAGA  3760

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3761  TAGGTAGACAGAGGTAAACATTCACATGATTTAGCTCTCTAGCTCTTGCACTCTGAACATTCTTGCTTTGGTTC  3834

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3835  TGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGAACCAAGGGGTCATTGGGGCAAAA  3908

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3909  GCATTGTTTCTCAAAGCTCCTTGATTAAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGA  3982

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 3983  AAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAAGAAAATCCTGAAGTTTCTGTTGAAGCCATACAATGTTCTAT  4056

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 4057  GGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGAGGAAGTCACTACTCCTAGCCTTTGTTAAGATGTAATTT  4130

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 4131  TAAATATTCAGTTATGGTACTATGTTTGCAACTCTCGTCTTATCACAATGCCTCAGTAGTTTGTTCCCTTAGAA  4204

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 4205  ACATTTAGATGTGCACAAATTAATCTTTTATATATCTAAAGGTTTTTCTATCATGCATTGGATTGCTCAGAATA  4278

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 4279  AAGTGTCTGTTAGACTTCGTTTTGGTAAATAAATTCTCCATAATGTAGATTAATAATATAAAAGTCTTTAATGA  4352

Query  574  --------------------------------------------------------  573
                                                                    
Sbjct 4353  CACAATATATCTATATAGCCTCACTGTATAATTCAGAAATAAAAATTGATTCTGCA  4408

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