Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13308
- Subject:
- XR_001746212.2
- Aligned Length:
- 4422
- Identities:
- 557
- Gaps:
- 3863
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCATGTGACCAGAAAATGGAGGCGAATCTGTATTTCCAGTTAACTGCTCAGAAGAGAGATGCTGAAGAGCTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGTCGTGCATCCTTCTCACCCTCCGTTAGAAAGCCTCCTCTCATCCTCAGAAGACTACTGTCAGAGGATGTAGG 148
Query 1 -ATGGACATCCCCTTTGAAGAGGGCGTGCTGAGTCCCAGTGCTGCAGACATGAGGCCTGAACCTCCTAATTCTC 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AATGGACATCCCCTTTGAAGAGGGCGTGCTGAGTCCCAGTGCTGCAGACATGAGGCCTGAACCTCCTAATTCTC 222
Query 74 TGGATCTTAATGACACTCATCCTCGGAGAATCAAGCTCACAGCCCCAAATATCAATCTTTCTCTGGACCAAAGT 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGGATCTTAATGACACTCATCCTCGGAGAATCAAGCTCACAGCCCCAAATATCAATCTTTCTCTGGACCAAAGT 296
Query 148 GAAGGATCTATTCTCTCTGATGATAACTTGGACAGTCCTGATGAAATTGACATCAATGTGGATGAACTTGATAC 221
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 297 GAAGGATCTATTCTCTCTGATGATAACTTGGACAGTCCAGATGAAATTGACATCAATGTGGATGAACTTGATAC 370
Query 222 CCCCGATGAAGCAGATTCTTTTGAGTACACTGGCCATGAAGATCCCACAGCCAACAAAGATTCTGGCCAAGAGT 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCCCGATGAAGCAGATTCTTTTGAGTACACTGGCCATGAAGATCCCACAGCCAACAAAGATTCTGGCCAAGAGT 444
Query 296 CAGAGTCTATTCCAGAATATACGGCCGAAGAGGAACGGGAGGACAACCGGCTTTGGAGGACAGTGGTCATTGGA 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAGAGTCTATTCCAGAATATACGGCCGAAGAGGAACGGGAGGACAACCGGCTTTGGAGGACAGTGGTCATTGGA 518
Query 370 GAACAAGAGCAGCGCATTGACATGAAGGTCATCGAGCCCTACAGGAGAGTCATTTCTCACGGAGGATACTATGG 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAACAAGAGCAGCGCATTGACATGAAGGTCATCGAGCCCTACAGGAGAGTCATTTCTCACGGAGGATACTATGG 592
Query 444 GGACGGTCTAAATGCCATCATTGTGTTTGCCGCCTGTTTTCTGCCAGACAGCAGTCGGGCGGATTACCACTATG 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGACGGTCTAAATGCCATCATTGTGTTTGCCGCCTGTTTTCTGCCAGACAGCAGTCGGGCGGATTACCACTATG 666
Query 518 TCATGGAAAATCTTTTCCTATATGTAATAAGTACTTTCACACTACAGCCGCAGAGC------------------ 573
||||||||||||||||||||||||||||||||||||| ||||.
Sbjct 667 TCATGGAAAATCTTTTCCTATATGTAATAAGTACTTT--------------AGAGTTGATGGTAGCTGAAGACT 726
Query 574 -------------------------------------------------------------------------- 573
Sbjct 727 ATATGATTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGGATGCCAGGGCTAGGCTGGATGAAGAAATGCTAC 800
Query 574 -------------------------------------------------------------------------- 573
Sbjct 801 CAGATGATTGACAGACGGTTGAGGAAGAATTTGAAATCATTCATCATTGTTCATCCATCTTGGTTCATCAGAAC 874
Query 574 -------------------------------------------------------------------------- 573
Sbjct 875 AATCCTTGCTGTGACACGACCTTTTATAAGTTCAAAATTCAGCAGTAAAATTAAATATGTCAATAGCTTATCAG 948
Query 574 -------------------------------------------------------------------------- 573
Sbjct 949 AACTCAGTGGGCTGATCCCAATGGATTGCATCCACATTCCAGAGAGCATCATCAAACTGGATGAAGAACTGAGG 1022
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1023 GAAGCATCAGAGGCAGCTAAGAAGTTGTGCTGTGTTCACTAAGAAGCAGAAGAGAGACGTGATTCGAGTGAGTT 1096
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1097 TTAGGCTTACTCCTCAGATACTTGGGAACCCATTTGACCTTCTGAAAAACAAGCTTTTCTTTAGTTATAAACAT 1170
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1171 CCATCTCAGTAAGTATTGACTTGAAGCTGAAAGAAAAGCCTTAGTTGGCCATGCTGGAAGAAGAGGATGCTTTT 1244
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1245 CTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT 1318
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1319 ACCTGGTGCCATTCTAAATTTCTAAGGGGAAAAATAGAAAGTTTGTTTACTCTTAAGATATTTTATGAAATTGT 1392
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1393 GTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCC 1466
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1467 ATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCTTAGACTGGTGTTTACCAGTAAGATACCTTTA 1540
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1541 ATCCACTGTTAAGTATGAGTGGATTTGTTTCCATAGATTAGCTGGATTTCCTTTTGGTGATTGCATTAGGTTTA 1614
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1615 AAGTACACAGGTCTCAACTCTCCCCAGGAAAGTTTCCCCTGTTTGACTCCACCTTTAAAATCCTAAGCCTGACT 1688
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1689 AGGACAGCCACAAACCACACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGAAT 1762
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1763 CTCCTTTAACTTCTCAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATTGGGCAT 1836
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1837 TATATTTTATGTAAATTGGTCTTTTAACATCATTTTCCTGATGAATGTTGGTGACCACCACATTGTGAAATTTA 1910
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1911 AGAATCCGTGTTGCATGTTTGGTAGCTCTCTGAGTTTCAGGCCATAAACTCAGCTCCAGAGGTTACCTTTTAAG 1984
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1985 TGCCAAGAACTCAAGTGCAAGGTGGCCTACTCAAAAATCATTTGGTAGCATTCAGTTATTCATGAATTCCTCTC 2058
Query 574 -------------------------------------------------------------------------- 573
Sbjct 2059 TCGCATGCATTATAAAAAGTGATCTGCTTTAAAACACCGTAATCTGATCATAGGCTTAAAATTAAATATGAGTA 2132
Query 574 -------------------------------------------------------------------------- 573
Sbjct 2133 TTACTTTCATGTACAAAATATTTCCTTTATAGTCTTCATATGCCCTTTAAAATGCCAACAAGATTTCAAGTCTG 2206
Query 574 -------------------------------------------------------------------------- 573
Sbjct 2207 TAGGCCTCTAGTGAGGTGGGGTGGCAAACCACAGCTAAGTCTCGCTCACCACTGCAAGCTAAGAATGGTTTTTA 2280
Query 574 -------------------------------------------------------------------------- 573
Sbjct 2281 CATTTTGGGTTGGAAAAATTTTTTTTGAATATTTCATGACACATGAAAATTATTCAAATGTTAGTGCCGATAAA 2354
Query 574 -------------------------------------------------------------------------- 573
Sbjct 2355 TAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACTGTCTACAGCTACTTTCACACTACAGCCGCA 2428
Query 574 -------------------------------------------------------------------------- 573
Sbjct 2429 GAGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATGTTTACAGAAAAAGTTTGCT 2502
Query 574 -------------------------------------------------------------------------- 573
Sbjct 2503 GACCCCTGCTCTAGCAAACGCATCCTTTCCTACTCCACCCCAATTTGTATTTAGATAGTTTCTCTAACAGAACG 2576
Query 574 -------------------------------------------------------------------------- 573
Sbjct 2577 GACAAATGAGGCTGCAAACTAATTTATTTTTGTCAAAAATCAATGTTTTGACATCCACAGACAGTGAAATAAAA 2650
Query 574 -------------------------------------------------------------------------- 573
Sbjct 2651 GAAATGGCTTGCTGAAAAACATGAGGAGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAG 2724
Query 574 -------------------------------------------------------------------------- 573
Sbjct 2725 CCTTCTTAGAAGCACTTCTTTAGTATATACAGGTGTTGGCTGAAGTCCGTGCCTCACTCTGGGAACCATTCTTA 2798
Query 574 -------------------------------------------------------------------------- 573
Sbjct 2799 GTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTC 2872
Query 574 -------------------------------------------------------------------------- 573
Sbjct 2873 TCATGGTGGAAAATTCATTGGGGAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACT 2946
Query 574 -------------------------------------------------------------------------- 573
Sbjct 2947 TTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTCACCTCTGTCTCCTCCCGTCCT 3020
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3021 TCCGCACGTGCCCACACACACGCAGTTCAGCCCTCTTTCCTCCATAAGCCTCCATCGTTTTCTCTTTTCTCCTC 3094
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3095 TTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCTGTTGGATCTCCTCCTTCATAACATCTGGCTTGT 3168
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3169 TGGACAGAAAAACCCTACAGCCCACCCCCTCCCACAGCCCACCTCCACTTTTGAAAGCCCAAATTACACCTCTC 3242
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3243 CCAGAACACAGTGTTGACGTAAATACAGTTACCCAATATTCCTGTTTGTTCACCTATTTGCTACTTTCACTCAG 3316
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3317 TAGCATCCCATTTTGTAAAATGAATTCCATGGTCACCCTGTCACAGGAAGTAATGAAAAATCCAGTGTTCAGTG 3390
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3391 TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGCCAAACAGACACAGCAACAAT 3464
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3465 CTCACCATTTATATATATATTTTTAACTTGTCCAGCTCATCTATGGAAAACTACTCAGGTGGTATGCTGTTTGA 3538
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3539 AGCCTCATCTTCCTACATGAAAATTATGGGCATTTGTCCCAATGATTTTGTTTCAGCTGTTCTGTAGGCTGCAT 3612
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3613 AACCACTCTGATATTTAGGTATCTGCTATTTTATTATCTTAAAAGACAAATTAATTTAATTGCATGTGCTAGGG 3686
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3687 AAAAGCTACCATGTACATTCACCCCAAGTAAATAGAATCCTAGATGAATCCTAGAAAAATAATCCCTAAGCAGA 3760
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3761 TAGGTAGACAGAGGTAAACATTCACATGATTTAGCTCTCTAGCTCTTGCACTCTGAACATTCTTGCTTTGGTTC 3834
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3835 TGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGAACCAAGGGGTCATTGGGGCAAAA 3908
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3909 GCATTGTTTCTCAAAGCTCCTTGATTAAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGA 3982
Query 574 -------------------------------------------------------------------------- 573
Sbjct 3983 AAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAAGAAAATCCTGAAGTTTCTGTTGAAGCCATACAATGTTCTAT 4056
Query 574 -------------------------------------------------------------------------- 573
Sbjct 4057 GGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGAGGAAGTCACTACTCCTAGCCTTTGTTAAGATGTAATTT 4130
Query 574 -------------------------------------------------------------------------- 573
Sbjct 4131 TAAATATTCAGTTATGGTACTATGTTTGCAACTCTCGTCTTATCACAATGCCTCAGTAGTTTGTTCCCTTAGAA 4204
Query 574 -------------------------------------------------------------------------- 573
Sbjct 4205 ACATTTAGATGTGCACAAATTAATCTTTTATATATCTAAAGGTTTTTCTATCATGCATTGGATTGCTCAGAATA 4278
Query 574 -------------------------------------------------------------------------- 573
Sbjct 4279 AAGTGTCTGTTAGACTTCGTTTTGGTAAATAAATTCTCCATAATGTAGATTAATAATATAAAAGTCTTTAATGA 4352
Query 574 -------------------------------------------------------- 573
Sbjct 4353 CACAATATATCTATATAGCCTCACTGTATAATTCAGAAATAAAAATTGATTCTGCA 4408
