Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13369
- Subject:
- XM_006513541.3
- Aligned Length:
- 3391
- Identities:
- 934
- Gaps:
- 2324
Alignment
Query 1 ATGGCG---ACCGCAGATACTCCGGCCCCGGCCTCCAGTGGCCTCTCGCCGAAGGAAGAAGGGGAGCTTGAAGA 71
|||||| .||||.|||.||.||.||||||||||.||.|||||||||||||||||||||||||||||.|||||
Sbjct 1 ATGGCGGCCGCCGCCGATCCTTCGACCCCGGCCTCTAGCGGCCTCTCGCCGAAGGAAGAAGGGGAGCTCGAAGA 74
Query 72 TGGGGAAATCAGTGACGACGATAATAACAGCCAGATACGGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCGGGC 145
.|||||.|||||.||||||| |.|||||||.||..|||| |.||||||||||||||||||||||||||||
Sbjct 75 CGGGGAGATCAGCGACGACG---ACAACAGCCGGAGCCGGA---GCAGCAGCAGCAGCAGCAGCGGCGGCGGGC 142
Query 146 TGTTACCCTATCCGCGGCGAAGGCCTCCTCACTCGGCCCGGGGCGGTGGATCTGGCGGA---GGCGGTGGCTCT 216
|||||||.||.||||||||..|||||||||.|.|||||||||||||||||||.||.||| |||||.|||||.
Sbjct 143 TGTTACCGTACCCGCGGCGGCGGCCTCCTCCCCCGGCCCGGGGCGGTGGATCCGGGGGAGGCGGCGGCGGCTCC 216
Query 217 TCCTCGTCATCGTCCTCTTCTCAGCAGCAGCTGAGGAATTTCTCACGCTCGCGGCACGCGTCTGAGCGGGGCCA 290
||.||.||.|||||.||.||.|||||||||||||||||||||||||||||.||||||.||.|.|||||||||||
Sbjct 217 TCGTCCTCCTCGTCGTCCTCCCAGCAGCAGCTGAGGAATTTCTCACGCTCACGGCACCCGGCCGAGCGGGGCCA 290
Query 291 CCTCAGGGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGTCTCATCCGCCTTCTGTACGGATGCCTTCGA 364
.||||||||||||||||||||||||||||||||||||||||||.||||.|||||..|.|..||||||||.|||.
Sbjct 291 GCTCAGGGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGACTCACCCGCCCCCAGGGCGGATGCCGTCGG 364
Query 365 GCTCACTGTCCGAAAGCAGTCCCCGGCCGTCTTTCTGGGAGCGGAGCCACCTCGCCTTGGACCGTTTCCGCTTT 438
|.||.|||||.||||||||.|||||||||||.||||||||||||||||||.|||||.|||||||||||||||||
Sbjct 365 GGTCCCTGTCGGAAAGCAGCCCCCGGCCGTCCTTCTGGGAGCGGAGCCACATCGCCCTGGACCGTTTCCGCTTT 438
Query 439 CGAG---GCAGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAGTGGGTGAGCGAGGAGGCAAGCC 509
|||| |||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 439 CGAGGCAGCAGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAGTGGGGGAGCGAGGAGGCAAGCC 512
Query 510 GGGGTGCAGACCTCCTCTGGG---------AGGAGGAGCAGGATCCGGGTTCAGCAGCAGTCAGAGCTGGCGAG 574
||||||||||||||||...|| |||||||||.||||||||.|||.|||||||.|||||||||||||
Sbjct 513 GGGGTGCAGACCTCCTGGAGGAGGAGGATCAGGAGGAGCGGGATCCGGATTCGGCAGCAGCCAGAGCTGGCGAG 586
Query 575 AGCCCTCTCCACCTCGGAAGAGCTCCAAAAGTTTTGGAAGGTCTCCATCAAGAAAACAAAATTATTCATCAAAA 648
|.|||||||||||.||.||||||||||||||.||||||||.|||||||||||||||||.|||.|.|||||.|||
Sbjct 587 AACCCTCTCCACCCCGCAAGAGCTCCAAAAGCTTTGGAAGATCTCCATCAAGAAAACAGAATCACTCATCCAAA 660
Query 649 AATGAAAACTGTGTGGAAGAAACTTTTGAAGATTTGCTTTTAAAGTATAAACAAATACAGTTGGAACTAGAATG 722
|..||.|||||||.||||||||||||||||||||||||||||||||||||.||||||||..||||||||||.||
Sbjct 661 AGCGAGAACTGTGCGGAAGAAACTTTTGAAGATTTGCTTTTAAAGTATAAGCAAATACAACTGGAACTAGAGTG 734
Query 723 CATCAATAAGGATGAAAAACTAGCATTGAGTAGCAAAGAAGAGAATGTGCAGGAAGATCCTAAAACATTGAACT 796
|||||||||||||||||||||.||..||||||||||||||||||.||..|||||||||||.|||||||||.|.|
Sbjct 735 CATCAATAAGGATGAAAAACTGGCTCTGAGTAGCAAAGAAGAGACTGCACAGGAAGATCCGAAAACATTGCATT 808
Query 797 TCGAGGACCAAACTAGCACTGATAATGTCAGTATTACAAAGGATTCAAGTAAAGAAGTAGCTCCTGAGGAGAAA 870
|.|||||||||||.|||||.|||||||..|||||||||||.||..|||||||.|||||.||||||||||||||.
Sbjct 809 TGGAGGACCAAACAAGCACCGATAATGCTAGTATTACAAAAGACCCAAGTAAGGAAGTGGCTCCTGAGGAGAAG 882
Query 871 ACACAAGTCAAAACTTTTCAGGCATTTGAATTAAAACCACTCAGGCAAAAATTGACTTTACCAGGAGATAAGAA 944
|||||.|||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||.||||||||
Sbjct 883 ACACAGGTCAAAACTTTTCAGGCATTTGAATTAAAACCACTCAGGCAAAAACTGACTTTACCAGGGGATAAGAA 956
Query 945 CCGTTTGAAAAAAGTTAAAGATGGAGCAAAACCACTTTCCCTGAAATCCGACACTACTGATTCTAGTCAAGG-- 1016
|||..|.||||.||..||.||||||.|||..|..||||||.||||||||..||||||.|||.||||.|||||
Sbjct 957 CCGGGTCAAAAGAGGGAAGGATGGAACAAGGCAGCTTTCCTTGAAATCCAGCACTACGGATGCTAGCCAAGGAT 1030
Query 1017 TA-----------------------------------TCCCT---------TATC------------GGGTAAA 1034
|| |.||| |||| .|||.||
Sbjct 1031 TAGAAGATAAAGAACAAAATTTAACAAGAAGACTCAGTGCCTCAGATATTGTATCTGAAAAGAAACTTGGTGAA 1104
Query 1035 G-----GAGG----GTTT----------TACTCCTATT-------------CCTGGTTTGAAATTTTCAGCG-- 1074
| |||| ||.| |.|.|||.|| .||.||..|||| |..||||.
Sbjct 1105 GAAGAAGAGGAACTGTCTGAGCTGCAGCTTCGCCTGTTGGCTCTTCAGTCGGCTAGTAAGAAA-TGGCAGCAGA 1177
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1178 AAGAGCAGCAGGTGATGAAGGAGAGCAAAGAAAAACTGACCAAGACCAAAACTGCACAGCAAAAGGCCAAAACC 1251
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1252 AGCACAAAAGCACACTCGGCCAAGAAAGTGAGCGCCACAGCTAAACAAGCACTGCGGAAGCAGCAGACAAAGGC 1325
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1326 GTGGAAGAAGCTCCAGCAGCAGAAAGAGCAGGAGAGACAGAAAGAGGAGGATCAGCGGAAACACGCTGAGGAAG 1399
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1400 AAGAGAGGAGGAAAAGAGAAGAAGAAATCAGAAAGATCCGAGACCTTTCCAACCAGGAAGAGCAGTACAATCGG 1473
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1474 TTCATGAAGTTGGTTGGTGGGAAGAGGCGAGCAAGAAGTAAATCTTCAGATCCTGACCTGAGGCGGTCCTTAGA 1547
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1548 AAAGCAGTCTGACAGTGCAGGAGGCATATATCAGTATGATAACTACGAAGAAGTTGCTATGGATACAGATAGTG 1621
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1622 AAACCAGTTCTCCAGCAGCGCCTTCACCCGTACAGCCACCGTTTTTTCCTGAGTGTTCACTGGGGTATTTTTCT 1695
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1696 TCAGCACCGTCTGTTTCTTTGCCTCCACCAGCTCAGGTTTCATCTGTGCCATCTTTGAACCAACCTTATGGGGA 1769
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1770 AGGCCTGTGCGTTTCTCTCGACCCTCTACCTCCTCTTCCACCTTTGCCACCTCTACCACCTGAAGATCCAGAAC 1843
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1844 AGCCTCCAAAGCCACCATTTGCAGATGAAGAGGAGGAGGAAGAAATGCTCCTTCGAGAAGAACTGCTTAAATCT 1917
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1918 CTAGCAAGTAAAAGAGCTTTTAAGCCAGAGGAAACATCCAGTAATAGCGACCCACCTTCACCTCCAGTTTTGAA 1991
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1992 CAATTCCCAGCCTTTGTCAAGAAGCAACCTATCAATAGTCAGTATTAATACAGTATCTCAGCCTAGGATACAGA 2065
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2066 ATCCAAAGTTCCACAGAGGACCTCGTCTTCCACGAACTGTGATCTCGCTTCCAAAACACAAATCAGTGGTTGTA 2139
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2140 ACCCTGAATGACTCAGATGACAGTGAGTCTGACGGAGAAGCTTCCAAGTCAACCAACAGTGTGTTTGGTGGATT 2213
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2214 AGAGTCCATGATCAAAGAAGCAAGGCGGACTGCAGAGCAAGCATCAAAACCCAAAGTACCTCCAAAGTCTGAGA 2287
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2288 AAGAAAACGACCCTCTGCGGACCCCTGAAGCCTTGCCTGAAGAAAAGAAGATGGAATACAGATTGTTAAAAGAA 2361
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2362 GAGATTGCCAATCGTGAGAAGCAACGTTTGATTAAATCAGATCAGCTGAAGACAAGTTCGTCGTCTCCAGCAAA 2435
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2436 CTCAGATGTGGAAATGGATGGGATTGGTAGAATAGCAATGGTTACTAAGCAAGTTGCAGATGCAGAAGCAAAGC 2509
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2510 TTAAAAAACACAAGATTCTCTTGATTAAAGATGAATCAGTTTTAAAAAATCTAGTACTGCAAGAAGCCAAGAAG 2583
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2584 AAAGAGTCTGTTCGAAATGCTGAAGCAAAAATTACAAAACTTACAGAACAGCTGCAGGCAGCAGAGAAAATCCT 2657
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2658 CAGTGCTAACAGGATGTTTCTGAAGAAGCTCCAGGAACAAATTCACAGAGTTCAACAGCGTGTTACCATTAAGA 2731
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2732 AAGCGTTGACTCTGAAGTATGGAGAAGAGCTTGCTCGGGCAAAGGCAGTGGCTAGCAAAGAACTAGGGAAACGC 2805
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2806 AAACTGGAGCAGGACCGTCTTGGACCAAACAAAATGATGAGACTGGATAATTCTCCAATATCAAGTCCAAGGAA 2879
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2880 GCATTCAGCAGAATTAATTGCTATGGAAAAAAGACGATTACAAAAGCTAGAATATGAATATGCCTTGAAAATTC 2953
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2954 AAAAGTTAAAAGAAGCCCGAGCCCTCAAAGCAAAGGAACAACAAAACCTCGTTCCCGTAGTGGAAGAGGAACCT 3027
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3028 GAGTTTTCTGTACCTCAACCCTCGCTTCATGATCTGACACAGGATAAATTAACCTTGGACACAGAAGAAAATGA 3101
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3102 TGTTGATGATGAAGTTTTGTCAGGTGCAAGCAGAGAACGAAGAAGATCCTTCCTAGAGTCCAATTCTTTCACTA 3175
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3176 AACCCAACCTTAAGCACACTGACACACCTAACAAAGAGTGTATAAACAAACTTAGTAAGAGTACTGTAGAAAAA 3249
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3250 CCAGAACTTTTTCTAGGGTTAAAAATAGGTGAACTACAAAAATTATATTCAAGAGCTGACAGTTTAAAACAGTT 3323
Query 1075 ------------------------------------------------------------- 1074
Sbjct 3324 GATTTTAAAAACGACCACAGGCACTACAGAAAAAGTTCTGCATGGCCAGGTATTGAAGAGA 3384
