Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13381
Subject:
XM_024453867.1
Aligned Length:
1479
Identities:
1335
Gaps:
144

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCCCACTATGTACCTGGTATGGTATTTTCAAGCTGCTCTATTCAGAATTATTATTGAGTCCCAGCAGAAGTG  74

Query    1  ----------------------------------------------------------------------ATGG  4
                                                                                  ||||
Sbjct   75  CATCGTGATCTTTGCCCTGGTGTGCTGCTTTGCCATTCTGGTTGCACTGATCTTTTCAGCCGTGGACATCATGG  148

Query    5  GAGAGGATGAGGATGGACTCTCAGAAAAAAATTGCCAAAATAAATGTCGAATTGCCCTGGTGGAAAATATTCCT  78
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GAGAGGATGAGGATGGACTCTCAGAAAAAAATTGCCAAAATAAATGTCGAATTGCCCTGGTGGAAAATATTCCT  222

Query   79  GAAGGCCTTAACTATTCAGAAAATGCACCATTTCACTTATCACTTTTCCAAGGCTGGATGAATTTACTCAACAT  152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAAGGCCTTAACTATTCAGAAAATGCACCATTTCACTTATCACTTTTCCAAGGCTGGATGAATTTACTCAACAT  296

Query  153  GGCCAAAAAGTCTGTTGACATAGTGTCTTCCCATTGGGATCTCAACCACACTCATCCATCAGCATGTCAGGGTC  226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGCCAAAAAGTCTGTTGACATAGTGTCTTCCCATTGGGATCTCAACCACACTCATCCATCAGCATGTCAGGGTC  370

Query  227  AACGTCTTTTTGAAAAGTTGCTCCAGCTGACTTCGCAAAATATTGAAATCAAGCTAGTGAGTGATGTAACAGCT  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AACGTCTTTTTGAAAAGTTGCTCCAGCTGACTTCGCAAAATATTGAAATCAAGCTAGTGAGTGATGTAACAGCT  444

Query  301  GATTCAAAGGTATTAGAAGCCTTGAAATTAAAGGGAGCCGAGGTGACGTACATGAACATGACCGCTTACAACAA  374
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GATTCAAAGGTATTAGAAGCCTTGAAATTAAAGGGAGCCGAGGTGACGTACATGAACATGACCGCTTACAACAA  518

Query  375  GGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGC  448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGC  592

Query  449  AATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGCAGCTGCCTGGTCCTAGATTTACAAAGG  522
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGCAGCTGCCTGGTCCTAGATTTACAAAGG  666

Query  523  ATATTTGCTCTATATAGTTCATTAAAATTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGT  596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATATTTGCTCTATATAGTTCATTAAAATTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGT  740

Query  597  CTATGACAATGAAAAGAAATTGCAACTTCAGTTGAATGAAACCAAATCTCAAGCATTTGTATCGAATTCTCCAA  670
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTATGACAATGAAAAGAAATTGCAACTTCAGTTGAATGAAACCAAATCTCAAGCATTTGTATCGAATTCTCCAA  814

Query  671  AACTCTTTTGCCCTAAAAACAGAAGTTTTGACATAGATGCCATCTACAGTGTGATAGATGATGCCAAGCAGTAT  744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AACTCTTTTGCCCTAAAAACAGAAGTTTTGACATAGATGCCATCTACAGTGTGATAGATGATGCCAAGCAGTAT  888

Query  745  GTGTACATCGCTGTCATGGACTACCTGCCTATCTCCAGCACAAGCACCAAAAGGACTTACTGGCCAGACTTGGA  818
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GTGTACATCGCTGTCATGGACTACCTGCCTATCTCCAGCACAAGCACCAAAAGGACTTACTGGCCAGACTTGGA  962

Query  819  TGCAAAAATAAGAGAAGCATTAGTTTTACGAAGCGTTAGAGTTCGACTCCTTTTAAGCTTCTGGAAGGAAACTG  892
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGCAAAAATAAGAGAAGCATTAGTTTTACGAAGCGTTAGAGTTCGACTCCTTTTAAGCTTCTGGAAGGAAACTG  1036

Query  893  ATCCCCTTACGTTTAACTTTATTTCATCTCTTAAAGCGATTTGCACTGAAATAGCCAACTGCAGTTTGAAAGTT  966
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ATCCCCTTACGTTTAACTTTATTTCATCTCTTAAAGCGATTTGCACTGAAATAGCCAACTGCAGTTTGAAAGTT  1110

Query  967  AAATTTTTTGATCTGGAAAGAGAGAATGCTTGTGCTACAAAAGAACAAAAGAATCACACCTTTCCTAGGTTAAA  1040
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AAATTTTTTGATCTGGAAAGAGAGAATGCTTGTGCTACAAAAGAACAAAAGAATCACACCTTTCCTAGGTTAAA  1184

Query 1041  TCGCAACAAGTACATGGTGACAGATGGAGCAGCTTATATTGGAAATTTTGATTGGGTAGGGAATGATTTCACTC  1114
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCGCAACAAGTACATGGTGACAGATGGAGCAGCTTATATTGGAAATTTTGATTGGGTAGGGAATGATTTCACTC  1258

Query 1115  AGAATGCTGGCACGGGCCTTGTTATCAACCAGGCAGATGTGAGGAACAACAGAAGCATCATTAAGCAACTTAAA  1188
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AGAATGCTGGCACGGGCCTTGTTATCAACCAGGCAGATGTGAGGAACAACAGAAGCATCATTAAGCAACTTAAA  1332

Query 1189  GATGTGTTTGAAAGGGACTGGTATTCACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTGCTCAAG  1262
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GATGTGTTTGAAAGGGACTGGTATTCACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTGCTCAAG  1406

Query 1263  CCTGTTCAAACTCAAACCCCTCTCCAACAAAACTGCCACAGACGACACAGGCGGAAAGGATCCCCGGAACGTA  1335
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CCTGTTCAAACTCAAACCCCTCTCCAACAAAACTGCCACAGACGACACAGGCGGAAAGGATCCCCGGAACGTA  1479

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.