Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_13397
• Subject: XR_928309.1
• Aligned Length: 2110
• Identities: 1513
• Gaps: 572

Alignment

Query    1  ---------------------------------------ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCT  35
                                                   |||||||||||||||||||||||||||||||||||
Sbjct    1  CTCAGTGTGGAGGCTGCTGGCCCTGCCATCTGTAAGAAGATGTCATACGGATCCATCGCCCGTGGAGGTGGCCT  74

Query   36  GGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCG  109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCG  148

Query  110  AGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGG  183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGG  222

Query  184  GAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGA  257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGA  296

Query  258  AGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATG  331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATG  370

Query  332  GCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTG  405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTG  444

Query  406  CTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAG  479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAG  518

Query  480  GTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGA  553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGA  592

Query  554  AGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCC  627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCC  666

Query  628  AGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTG  701
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTG  740

Query  702  CCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGG  775
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGG  814

Query  776  AGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAG  849
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAG  888

Query  850  TCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGAC  923
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGAC  962

Query  924  CATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGC  997
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGC  1036

Query  998  AGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAG  1071
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAG  1110

Query 1072  AAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGC  1145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGC  1184

Query 1146  CCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGG  1219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGG  1258

Query 1220  CGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAG  1293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAG  1332

Query 1294  AGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGA  1367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGA  1406

Query 1368  TAGTATTGAAGCCAGCCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGCCAGCC  1441
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TAGTATTGAAGCCAGCCTTGAGGCTGCGTCCTCGCATGCGGAGGCAGCCCGCCAGCTCCTGGCTGGAGCCAGCC  1480

Query 1442  GGCACCAACT--------CCA------GAGACA--------------------CAAGATCAAGTGCTGCTTCCT  1481
            ||||||||||        |||      ||||||                    ||||.|||..|||.|..|...
Sbjct 1481  GGCACCAACTGGTGAACGCCAGGCCGGGAGACAAGACCTGGGAGAGGCTGTGCCAAGGTCACCTGCAGGATGAG  1554

Query 1482  ATCAG-----------------------CTGGAGTCA---CTGCCCTGCTTGTCATCATCATCATCATCGC---  1526
            .||||                       ||||.|.||   |||..|||.|||.|.|||.|    .|.|.||   
Sbjct 1555  GTCAGAGGCAAGGCTGGGGCTGGGTCTCCTGGCGCCAGCTCTGGGCTGTTTGGCCTCAGC----CCTTGGCCCA  1624

Query 1527  -CACCTCT-GTCCGAAAG--------------------------------------------------------  1542
             ||||||| |||....||                                                        
Sbjct 1625  GCACCTCTAGTCGCTGAGGGCAGCTAGGCCCAGGGGCCTCCAGGAGGCAGAAGGTGATGGGCAGAAGGTGACGC  1698

Query 1543  --------------------------------------------------------------------------  1542
                                                                                      
Sbjct 1699  CTGGTGACGGGCAAGGTGGACTCGCTGGAAACTCAGGGCCACACCACGCAGAAGGCCTTGTTTCAAGAGGAAAG  1772

Query 1543  --------------------------------------------------------------------------  1542
                                                                                      
Sbjct 1773  CCAGCCAGCAAGATGACCCCTCCTGAGCACCCTGGGATCACCTGGTCAGAAGCAGCGCTGATGCCTGGGACGGC  1846

Query 1543  --------------------------------------------------------------------------  1542
                                                                                      
Sbjct 1847  AGGAGGACGATGGGACAGTGAGGAAGAGGAGGAGGTGAAGGAGGAGGAGGAAAGGAGGGCAGTGGCAACTGGGC  1920

Query 1543  --------------------------------------------------------------------------  1542
                                                                                      
Sbjct 1921  CAGCCACCTGTGCCATGGACGCCGTGCCGCATTCCCAGTGAGCCTGTGGGCTCAGTCCTGGCAGAGCAGGCACC  1994

Query 1543  --------------------------------------------------------------------------  1542
                                                                                      
Sbjct 1995  GCCCCCCCGACACACTGCAGAGGAGCTGATGAGGAGGACGAGACCCCCAGCTGCTTGTGGCTGCCCCTGAGGTC  2068

Query 1543  --------------------------------------  1542
                                                  
Sbjct 2069  CCTGGAAGGGCCCAGCCTGCCTGAACCTGACCCCCTGG  2106