Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13442
- Subject:
- XM_017013218.1
- Aligned Length:
- 1673
- Identities:
- 739
- Gaps:
- 913
Alignment
Query 1 ATGTGCACCGTAG---TGGACCCTCGCATTGT-----CCGGAGATACCTACTCAGGCGGCAGCTCGGGC----- 61
||| ||..|| .|||| ||..|| |.|.|||.||| |.||||| ||||
Sbjct 1 ATG----CCAGAGGCTGGGAC-----CAGGGTGGGGGCAGAAGAGACC-------GTGGCAG---GGGCTAGAT 55
Query 62 -----AGG-------GGGCCTATGGCATTGTGTGGAAGGCAGTGGACCGGAGGACTGGTGAGGTCGTGGCCATC 123
||| .||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 56 TCTGGAGGAATCTGAAGGCCTATGGCATTGTGTGGAAGGCAGTGGACCGGAGGACTGGTGAGGTCGTGGCCATC 129
Query 124 AAGAAAATCTTTGATGCTTTTAGGGATAAGACAGATGCC----------------------------------- 162
|||||||||||||||||||||||||||||||||||||||
Sbjct 130 AAGAAAATCTTTGATGCTTTTAGGGATAAGACAGATGCCCAGGACATGGGCTTCCTTCTTGCTCCACCCACCCA 203
Query 163 ----------------------CAGAGAACATTCCGGGAAATCACGCTCCTCCAGGAGTTTGGGGACCATCCCA 214
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 204 CACACCTGTGTTTCTGTCTCTTCAGAGAACATTCCGGGAAATCACGCTCCTCCAGGAGTTTGGGGACCATCCCA 277
Query 215 ACATCATCAGCCTCCTTGACGTGATCCGGGCAGAGAACGACAGGGACATTTACCTGGTGTTTGAGTTTATGGGT 288
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 278 ACATCATCAGCCTCCTTGACGTGATCCGGGCAGAGAACGACAGGGACATTTACCTGGTGTTTGAGTTTATG--- 348
Query 289 TGCCCCCCCAGCCCCCCACCCCCGACTGCAGTGCGCACCCTCTCTGCAGACACTGACCTGAACGCAGTCATCCG 362
||||||||||||||||||||||||||
Sbjct 349 ------------------------------------------------GACACTGACCTGAACGCAGTCATCCG 374
Query 363 GAAGGGCGGCCTGCTGCAGGACGTCCACGTGCGCTCCATCTTCTACCAGCTCCTGCGGGCCACCCGGTTCCTCC 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 375 GAAGGGCGGCCTGCTGCAGGACGTCCACGTGCGCTCCATCTTCTACCAGCTCCTGCGGGCCACCCGGTTCCTCC 448
Query 437 ACTCGGGGCACGTTGTGCACCGGGACCAGAAGCCGTCCAATGTGCTCCTGGATGCCAACTGCACAGTGAAGCTG 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 449 ACTCGGGGCACGTTGTGCACCGGGACCAGAAGCCGTCCAATGTGCTCCTGGATGCCAACTGCACAGTGAAGCTG 522
Query 511 TGTGACTTTGGCCTGGCCCGCTCCCTGGGCGACCTCCCTGAGGGGCCTGAGGACCAGGCCGTGACAGAGTACGT 584
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 523 TGTGACTTTGGCCTGGCCCGCTCCCTGGGCGACCTCCCCGAGGGGCCTGAGGACCAGGCCGTGACAGAGTACGT 596
Query 585 GGCCACACGCTGGTACCGAGCACCGGAGGTGCTGCTCTCTTCGCACCGATACACCCTTGGGGTGGACATGTGGA 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 GGCCACACGCTGGTACCGAGCACCGGAGGTGCTGCTCTCTTCGCACCGATACACCCTTGGGGTGGACATGTGGA 670
Query 659 GTCTGGGCTGTATCCTGGGGGAGATGCTGCGGGGGAGACCCCTGTTCCCCGGCACGTCCACCCTCCACCAGCTG 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 671 GTCTGGGCTGTATCCTGGGGGAGATGCTGCGGGGGAGACCCCTGTTCCCCGGCACGTCCACCCTCCACCAGCTG 744
Query 733 GAGCTGATCCTGGAGACCATCCCACCGCCATCTGAGGAGGAC-------------------------------- 774
||||||||||||||||||||||||||||||||||||||||||
Sbjct 745 GAGCTGATCCTGGAGACCATCCCACCGCCATCTGAGGAGGACACCTCCCCAGAGGCCTTGGACCTCCTTAGGCG 818
Query 775 -CTCCTGGCT------------------------CTCGGCTCAGG--CTGCCGTGCCTCT--GTG--------- 810
||||||| | |.||.|.|||| ||||.|..||.|| |||
Sbjct 819 ACTCCTGG-TGTTCGCCCCGGACAAGCGGTTAAGCGCGACCCAGGCACTGCAGCACCCCTACGTGCAGAGGTTC 891
Query 811 --CTGCACCAGC-------------------------TGGGGTCCCGG-------------------------- 831
||||.||||| ||.||.|||||
Sbjct 892 CACTGCCCCAGCGACGAGTGGGCACGAGAGGCAGATGTGCGGCCCCGGGCACACGAAGGGGTCCAGCTCTCTGT 965
Query 832 -------------------------------------------------------------------------- 831
Sbjct 966 GCCTGAGTACCGCAGCCGCGTCTATCAGATGATCCTGGAGTGTGGAGGCAGCAGCGGCACCTCGAGAGAGAAGG 1039
Query 832 -------------------------------------------------------------------------- 831
Sbjct 1040 GCCCGGAGGGTGTCTCCCCAAGCCAGGCACACCTGCACAAACCCAGAGCCGACCCTCAGCTGCCTTCTAGGACA 1113
Query 832 -------------------------------------------------------------------------- 831
Sbjct 1114 CCTGTGCAGGGTCCCAGACCCAGGCCCCAGAGCAGCCCAGGCCATGACCCTGCCGAGCACGAGTCCCCCCGTGC 1187
Query 832 -------------------------------------------------------------------------- 831
Sbjct 1188 AGCCAAGAACGTTCCCAGGCAGAACTCCGCTCCCCTGCTCCAAACTGCTCTCCTAGGGAATGGGGAAAGGCCCC 1261
Query 832 -------------------------------------------------------------------------- 831
Sbjct 1262 CTGGGGCGAAGGAAGCGCCCCCCTTGACACTCTCGCTGGTGAAGCCAAGCGGGAGGGGAGCTGCGCCCTCCCTG 1335
Query 832 -------------------------------------------------------------------------- 831
Sbjct 1336 ACCTCCCAGGCTGCGGCTCAGGTGGCCAACCAGGCCCTGATCCGGGGTGACTGGAACCGGGGCGGTGGGGTGAG 1409
Query 832 -------------------------------------------------------------------------- 831
Sbjct 1410 GGTGGCCAGCGTACAACAGGTAAGCCCGGCCCAGTCTGCCCCCGTCCCCTCATCCTCCTTTCCCCTTTCCCCTT 1483
Query 832 -------------------------------------------------------------------------- 831
Sbjct 1484 CCCCCCTGCTTTTCCCTCCCTTCCCCATGCTTCCCATTGCCCCTCCAATGTCCAGTTCAAATCTCTCGAGGACC 1557
Query 832 --------------------------------------------- 831
Sbjct 1558 TCAAGGCCTCCCCTCCACTGCACCCCCTCTGATGGCCCCTTTATG 1602
