Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13442
Subject:
XR_001745493.1
Aligned Length:
1911
Identities:
762
Gaps:
1137

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGGTGCGTCCGCGCGCCGAGGGGCGCGGCAGATCTGCGGAGAGAGGACCTGCGGGGCGCGGCCGGTCCCCTCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGGCCTGTTCCGTCACACACTGGCGTCCTGCCTCCTCCGTAGGCGGGAGAGGTGGTCTGGAGCCCCTTCGTGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCAGTTTCCTCATGGGGTAACACGATCCTGACTCCCAGGAACCTGGCTCCTGGAGGCAGGTGACAGCCAGGGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCCAGAGGCCTCAGGCAGAGGGATCCTGGCGCCCCACTCCCCACGCGTCCACAGTCGCCCGCTTCCCGGGTGCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CACGACGCTCTGGGGAGGCTGGGCCCGCGCCCGGGTCACTGAGAGGAAGGGCGGACCCCAGGCTCAGGAGCACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGGGCGAGGCCCGAGAAGGGCCTGAGCGGTTATGGGGTGGGCGCAGAGTGAAGGGCAGAGCCTTGTGTATCTGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGTGTGTGTGAGCATGTAAGCCTGTGTGTGTGTGCGTGGGTGTGTGGGGGGGTGTTCGAGGGTGCCATGGGGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGGGGAGGAAGAGCCTTCCAGGCAGTGCAGACGGTAAGTGCGTAGGCCCAGTGCAGGGTTGTGTATGTGCAACT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGATAGGAGATGGAGAGAGACAGGTGAGTGGTGAGGGTCCGATCGTGTGGGAGCTTTGGGGAACTTCCAAGACT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTGGTTTTTACTGTTGCTGAGGCTGGGAGCTGTAGCAGCTGCTGGTGTCACTTTACAAGGCCCACCCCTGTGCT  740

Query    1  ---------------ATGTGCACCG-----------------------------TAGTGGACCCTCGCATTGTC  30
                           .|||||||.|                             |||.|.|.||.||||    .
Sbjct  741  GAGGACCTACCGTGGGTGTGCACGGGAGCGGCAGACGGAGATGAGTTAAGGGGTTAGCGTAGCCACGCA----G  810

Query   31  CG-GAGATACC---------TACTCA----GGCGGCAG------CTCG-GGCAGGG------------------  65
            || |||||.||         .|| ||    ||.|||||      | || |||||||                  
Sbjct  811  CGAGAGATGCCAGAGGCTGGGAC-CAGGGTGGGGGCAGAAGAGAC-CGTGGCAGGGGCTAGATTCTGGAGGAAT  882

Query   66  -----GGCCTATGGCATTGTGTGGAAGGCAGTGGACCGGAGGACTGGTGAGGTCGTGGCCATCAAGAAAATCTT  134
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  883  CTGAAGGCCTATGGCATTGTGTGGAAGGCAGTGGACCGGAGGACTGGTGAGGTCGTGGCCATCAAGAAAATCTT  956

Query  135  TGATGCTTTTAGGGATAAGACAGATGCC----------------------------------------------  162
            ||||||||||||||||||||||||||||                                              
Sbjct  957  TGATGCTTTTAGGGATAAGACAGATGCCCAGGACATGGGCTTCCTTCTTGCTCCACCCACCCACACACCTGTGT  1030

Query  163  -----------CAGAGAACATTCCGGGAAATCACGCTCCTCCAGGAGTTTGGGGACCATCCCAACATCATCAGC  225
                       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031  TTCTGTCTCTTCAGAGAACATTCCGGGAAATCACGCTCCTCCAGGAGTTTGGGGACCATCCCAACATCATCAGC  1104

Query  226  CTCCTTGACGTGATCCGGGCAGAGAACGACAGGGACATTTACCTGGTGTTTGAGTTTATGGGTTGCCCCCCCAG  299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct 1105  CTCCTTGACGTGATCCGGGCAGAGAACGACAGGGACATTTACCTGGTGTTTGAGTTTATG--------------  1164

Query  300  CCCCCCACCCCCGACTGCAGTGCGCACCCTCTCTGCAGACACTGACCTGAACGCAGTCATCCGGAAGGGCGGCC  373
                                                 |||||||||||||||||||||||||||||||||||||
Sbjct 1165  -------------------------------------GACACTGACCTGAACGCAGTCATCCGGAAGGGCGGCC  1201

Query  374  TGCTGCAGGACGTCCACGTGCGCTCCATCTTCTACCAGCTCCTGCGGGCCACCCGGTTCCTCCACTCGGGGCAC  447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1202  TGCTGCAGGACGTCCACGTGCGCTCCATCTTCTACCAGCTCCTGCGGGCCACCCGGTTCCTCCACTCGGGGCAC  1275

Query  448  GTTGTGCACCGGGACCAGAAGCCGTCCAATGTGCTCCTGGATGCCAACTGCACAGTGAAGCTGTGTGACTTTGG  521
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1276  GTTGTGCACCGGGACCAGAAGCCGTCCAATGTGCTCCTGGATGCCAACTGCACAGTGAAGCTGTGTGACTTTGG  1349

Query  522  CCTGGCCCGCTCCCTGGGCGACCTCCCTGAGGGGCCTGAGGACCAGGCCGTGACAGAGTACGTGGCCACACGCT  595
            |||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1350  CCTGGCCCGCTCCCTGGGCGACCTCCCCGAGGGGCCTGAGGACCAGGCCGTGACAGAGTACGTGGCCACACGCT  1423

Query  596  GGTACCGAGCACCGGAGGTGCTGCTCTCTTCGCACCGATACACCCTTGGGGTGGACATGTGGAGTCTGGGCTGT  669
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1424  GGTACCGAGCACCGGAGGTGCTGCTCTCTTCGCACCGATACACCCTTGGGGTGGACATGTGGAGTCTGGGCTGT  1497

Query  670  ATCCTGGGGGAGATGCTGCGGGGGAGACCCCTGTTCCCCGGCACGTCCACCCTCCACCAGCTGGAGCTGATCCT  743
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1498  ATCCTGGGGGAGATGCTGCGGGGGAGACCCCTGTTCCCCGGCACGTCCACCCTCCACCAGCTGGAGCTGATCCT  1571

Query  744  GGAGACCATCCCACCGCCATCTGAGGAGGACCTCCTGGCTCTCGGCTCAGGCTGCCGTGCCTCTGTGCTGCACC  817
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1572  GGAGACCATCCCACCGCCATCTGAGGAGGACCTCCTGGCTCTCGGCTCAGGCTGCCGTGCCTCTGTGCTGCACC  1645

Query  818  AGCTGGGGTCCCGG------------------------------------------------------------  831
            |||||||||||||.                                                            
Sbjct 1646  AGCTGGGGTCCCGACACCTCCCCAGAGGCCTTGGACCTCCTTAGGCGACTCCTGGTGTTCGCCCCGGACAAGCG  1719

Query  832  --------------------------------------------------------------------------  831
                                                                                      
Sbjct 1720  GTTAAGCGCGACCCAGGCACTGCAGCACCCCTACGTGCAGAGGTTCCACTGCCCCAGCGACGAGTGGGCACGAG  1793

Query  832  -------------------------------------------------------------  831
                                                                         
Sbjct 1794  AGGCAGATGTGCGGCCCCGGGCACACGAAGGGGTCCAGCTCTCTGTGCCTGAGTACCGCAG  1854

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