Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13507
- Subject:
- NR_145491.1
- Aligned Length:
- 3292
- Identities:
- 345
- Gaps:
- 2933
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCCCCCCCTCCCGGCAGAAACCTGGAAGTGGAAATCTCGGGCATTCACCGTTTGGGTGAAGACGGAGGCGGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTGGACAGACGTAGGCTGTCAGGGAGTGTTTACTTCGCCTCCACTTCTGTTCCTCCCTGCCCTGGTGCTGCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGTCACATACTCGTCCTGAGCCGGCTTCAGCCTGTCCGCGCAGAAGTCTCCCGGAGCCATGGCCTAGTACTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTATGTGAAGTCTAGCAAGCTCGTGCTCAAGGGAACCGAGTAAGAAGAAAAAGAGCAAAGATAAGAAGAGAAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAGAAGATGAAGAAACCCAGCTTGATACGTTGGAATCTGGTGAACAGTAACAAACTTTGGTGAAATTTCAGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACCATAGCCATTGAAATGGATGAGGGAACCTATATACATGCACTCGACAATGGTCTTTTTACCCTGGGAGCTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACACAAAGAAGAATCGCCCTGAAATCTGGCTATGGAAAATATCTTGGTATAAATTCAGATGAACTTGTTGGGCA 518
Query 1 -------------------------------------------------------ATGGCTTTGTTGGCCTCAA 19
|||||||||||||||||||
Sbjct 519 TTCAGATGCAATTGGACCAAGAGAACAATGGGAACCAGTCTTTCAAAATGGGAAAATGGCTTTGTTGGCCTCAA 592
Query 20 ATGGCTGCTTTATTAGATGCAATGAAGCAGGGGACATAGAAGCAAAAAGTAAAACAGCAGGAGAAGAAGAAATG 93
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATAGCTGCTTTATTAGATGCAATGAAGCAGGGGACATAGAAGCAAAAAGTAAAACAGCAGGAGAAGAAGAAATG 666
Query 94 ATCAAGATTAGATCCTGTGCTGAAAGAGAAACCAAGAAAAAAGATGACATTCCAGAAGAAGACAAAGGAAATGT 167
|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATCAAGATTAGATCCTGTGCTGAAAAAGAAACCAAGAAAAAAGATGACATTCCAGAAGAAGACAAAGGAAATGT 740
Query 168 CAAACAATGTGAAATCAATTATGTAAAGAAATTTCAGAGCTTCCAAGAGCACAAACTTAAAATAAGTAAAGAAG 241
.|||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 741 AAAACAATGTGAAATCAATTATGTAAAGAAATTTCAGAGCTTCCAAGACCACAAACTTAAAATAAGTAAAGAAG 814
Query 242 ACAGTAAAATTCTTAAAAAGGCTCAGAAAGATGGATTTTTGCATGAGACGCTTCTGGACAGTTTAGGCTATGAG 315
|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |.|.||
Sbjct 815 AGAGTAAAATTCTTAAAAAGGCTCAGAAAGATGGATTTTTGCATGAGACGCTTCTGGACAG---AG--TCTCAG 883
Query 316 -CATAG---------------------------------ATGGAAGAGGTGGCT--GCTG------TATTGGAT 347
||||| ||||| |||.|| ||.| .||||.||
Sbjct 884 TCATAGCCTGCCTTCATCTCTGAAGGGACCAGGCGACCCATGGA----GTGCCTCGGCAGCCTCGTCATTGCAT 953
Query 348 --------------CAAGGAT----------------------ATGAGCAGAGATG-GA--------------- 369
||| ||| |.|||||.||.|| ||
Sbjct 954 GCAATCTTCACAGACAA-GATCTCACTGCAACCACGTTTCTACAGGAGCACAGGTGTGACATTATACTGATGAC 1026
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1027 ATCATTCTCAGAGAAAATTCATTTTACATACTAAGGACACACAGATACAAGGAGGCTTACACAAAGGGAGTGGA 1100
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1101 CCTCTCCTCAACACAGTAGTGCAAGGCCCTGCCACTTTGCTTCAATTCCTGAAAATTCCTTGGTAAACTTGGGG 1174
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1175 CTGCTCTATTCCTGACACTTTCAAAAAACAGTTATTCATCCTCTCAGCATCCACAATGTTAATACAAACCCAAC 1248
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1249 ATTCTTCAATTTGTGTTTTGTTTTTTGGAGGCACAGTCTTGCTCTGTCACCCAGGCTGGTATGAAGTGGCACAA 1322
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1323 TTTCAGCTCACTGCAGCCTCGACCTCCTGAGCTCAAGCAATTCTCCCATCTCGGCCTTCCAAGTAGCTCGGACT 1396
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1397 GCAAGTGTGTGCCACGACACTCAGCTAATTTTGTTTAATTTTTTGTAGAGAAAAGGTCTCGCTATGTTACCCAG 1470
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1471 GCTGGTCTCAAACTCCTGGGCTGAAGGGATCCTCTTGCTTCAGCCTCCCAAAGTTCTGGGGTTACAGTTGTGAG 1544
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1545 CCACTGTGCCCAGCCCTTTAATTCTTTACTTGGGGTTCAGGTGACAACATATTTCTTGTTTACAAATCTTACTT 1618
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1619 AATCTCACTGATGCTGTCATTGGCAAACTGACCCACCTCGAATGAAGCCTCCTCCAACAAGTCTGGAATCTGTC 1692
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1693 CAAATTTAAATTAACAGGTACTTCTATGAATTCCCTCAGAGAACACACTGTGGATGCTTTAGAGACCTCTTCCC 1766
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1767 ATGCATCCTGAATTATCTGGGTTGCATATGGTGGCCATAAGTAGTCCATGGGCTTCTGATGTAAAAACAAACCT 1840
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1841 GCCCCTTTTGACCCTGCTCTGTACAGCATCAGGGCAGTGATTGCTGACCATATCCTGGACCCTCTGGAAACAGA 1914
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1915 GGGCTCTGCATCCATGTCCATGAGCCTTCATGCCCATCTGGCCATCAGGCCTTGGGAAGCAGCACCCCACAGCC 1988
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1989 TTGGCACAGCTGCAGAGACCTCCTTGCCTCAGGATGGAGTCAAACCTGGACCCCCTGCCATTCTCATCTGCAGG 2062
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2063 AAACACTGCCCTCCTTCATTCTCAGGCTGTGTTGCTGGAAGTCACCCGTCTCCGAGGACCCTTGGGATCGACTG 2136
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2137 AGTGACCAGCAGTGAAGTTCATCCACCTTCTGAATGGATGCCATCATCTGACATGATGGAGCGCAGTGGGATGC 2210
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2211 TGCTGCCTTCCCTCCCTTAGCTAGGATGTCCCTGATAAAGGATGACACCCAAGCCTCAGCACAACTGGCCAAAC 2284
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2285 TTGAGGTGGTCATCTCAGCACTGATGCTGGGCCAACAATTAGCCCCATTTGTACATTTTTACAAATTTTTGGCA 2358
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2359 ATTGTCAAGAATTGTCCACCTTCCCTCCCCATTGAATTAAAGAAACTTCTTGCCTCATGGATACTCAGAATACA 2432
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2433 ATCAAGGTAACAGATGCCTTTTTTTTTAACCAAGGACACAGTACAGATCTCACAGGGACACTCCTTATCTCCTG 2506
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2507 CAGAGTTCCAGACACTACTGATGGTGACCAAGGCAACATTCATCGGAAAACACAGTGCTAGGCTTGTGAAAGTG 2580
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2581 TCCAGTAGGGCTTCCACTGCCCCTATAGGCTGCAGGCAGCTGCTTTAGTTGAGAGAGAGACTGAGCTCCTCAAA 2654
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2655 GAATTCCTATTTAAGTTACAAAGCAGCGAGTGGATGCCCTGCTGGGTTCCACTGTTGCCACAGGCTTTGATTAC 2728
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2729 TCTAAGTTCATGCTTCTTAGGAAAGTGCACTTTTTACACCAACGCTACACAGTTCCCTCAGTTGCCTTTACTGG 2802
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2803 ACATCAAGGAGTTCACATTTTTGACAACCATTCAGTCCTGGACTGTCCAAGGGGTGGAGGTAGCTCCGTACAGG 2876
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2877 AAGCTGCCTGCTGCGTGTGGATCAGTAATATCAGACTTGCCCAACAACTCACTGGAGACATGAAAATCAATGCA 2950
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2951 TGGGGTTGCATGATATCACCCAAATATTTATGAAAACACTTGTGTGGCCAGAGACCCCAGATATCTAAACCAAA 3024
Query 370 -------------------------------------------------------------------------- 369
Sbjct 3025 GCATGGGGAATGCATGACATCACCCAAATATTTACGAACATGCTTGTGCTGCCAGAGACCCCAGATCACTTTCC 3098
Query 370 -------------------------------------------------------------------------- 369
Sbjct 3099 CTGCCTCCTGCTAAATAAATGGGGGTCGTAGCTTTGCATTGGCTTCCACATTACATTACTCATAACTGTGGCCT 3172
Query 370 -------------------------------------------------------------------------- 369
Sbjct 3173 TCCTAATCTCTCATGTCCCTAAGCACTTATTATAATGTCTCAGCAGCTTTCAGCCTCTCAAAATATTAGTCATC 3246
Query 370 ------------------------------------ 369
Sbjct 3247 ATGAAAATAAATGTCTGATATTAAAAAAAAAAAAAA 3282
