Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13692
- Subject:
- XM_011525175.2
- Aligned Length:
- 1683
- Identities:
- 972
- Gaps:
- 651
Alignment
Query 1 ATGGACGTGGTAGAGGTCGTGGGTAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAAGGG 74
|||||||||||||||||||.|||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGACGTGGTAGAGGTCGCGGGCAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAAGGG 74
Query 75 ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTAAGCCTTTTGGAAGCTACAACAACAACATCGATCACTTTG 148
|||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||||.||.|
Sbjct 75 ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTAAGCCTTTTCGAAGCTACAACAACAACGTCGATCATTTGG 148
Query 149 GGAT---------------------------------------------------------------------- 152
||||
Sbjct 149 GGATTGTACAGTCCTGCCCCTCCTGGGAATCAGCCCCACAGGAAGGCCCTTGTCCTCCCTTCCCTGTGCCTTCT 222
Query 153 ------------------------------------------------------GCA----------------- 155
|||
Sbjct 223 CCTGGGCTGAGCCCTGAGCTGGAAAGGGACAGAGCCAGTCCTTTCTGGGGGTCGGCACCCAGGCTGGGGCCGCT 296
Query 156 -----------GCA-------------------------------TGAGACGGAGCTGCCTCCTCTGACTGCGC 187
||| |||||||||||||||||||||||||||||
Sbjct 297 CCAGGCCCCGTGCAGTTCCTCAGCTCTGCCTGGGTTGCCTTACAGTGAGACGGAGCTGCCTCCTCTGACTGCGC 370
Query 188 GGGAGGTGAAGCAAATTCGGCGGGAGATCAGCCGAAAGAGCAAGTGGGTGAAAATGCTGGGAGAATGGGACACC 261
||||||.|||||||||||||||||||||||||||||||||||||||||||.|.|||||||||||.|||||.|..
Sbjct 371 GGGAGGCGAAGCAAATTCGGCGGGAGATCAGCCGAAAGAGCAAGTGGGTGGATATGCTGGGAGACTGGGAGAAA 444
Query 262 TACAAAAACAGCAGAAAGCTCATAGATCGAGCGTACCAGGGAATTCCCATGAACATCCGGGGCCCGATGTGGTC 335
|||||||.||||||||||||||||||||||||||||.|||||||.|||||||||||||||||||||||||||||
Sbjct 445 TACAAAAGCAGCAGAAAGCTCATAGATCGAGCGTACAAGGGAATGCCCATGAACATCCGGGGCCCGATGTGGTC 518
Query 336 AGTCCTCCTGAACATTGAGGAAATCAAGTTGAAAAACCCCGGAAGATACCAGATCATGAAGGAGAAGGGCAAGA 409
||||||||||||||.|||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGTCCTCCTGAACACTGAGGAAATGAAGTTGAAAAACCCCGGAAGATACCAGATCATGAAGGAGAAGGGCAAGA 592
Query 410 GGTCATCTGAACACATCCAGCAGATGGACCTGGACGTAAGTGGGACATTAAGGAGGCATATATTCTTCAGGGAT 483
||||||||||.||||||||||..||.||||.||||.||||.|||||||||||||.||||||.||||||||||||
Sbjct 593 GGTCATCTGAGCACATCCAGCGCATCGACCGGGACATAAGCGGGACATTAAGGAAGCATATGTTCTTCAGGGAT 666
Query 484 CGATACGGAACCAAGCAGCGGGAACTACTTTACATCCTCCTGGCGTATGAGGAGTATAACCCGGAGGTGGGCTA 557
|||||||||||||||||||||||||||||..|||||||||||||.|||||||||||||||||||||||||||||
Sbjct 667 CGATACGGAACCAAGCAGCGGGAACTACTCCACATCCTCCTGGCATATGAGGAGTATAACCCGGAGGTGGGCTA 740
Query 558 CTGCAGGGACCTGAGCCACATCGCCGCCTTGTTCCTCCTTTATCTTCCTGAGGAGGATGCATTCTGGGCACTGG 631
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 741 CTGCAGGGACCTGAGCCACATCGCCGCCTTGTTCCTCCTCTATCTTCCTGAGGAGGATGCATTCTGGGCACTGG 814
Query 632 TGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCAGGGATTTCACAGCCCAAATGGCGGGACCGTCCAGGGGCTC 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCAGGGATTTCACAGCCCAAATGGCGGGACCGTCCAGGGGCTC 888
Query 706 CAAGACCAACAGGAGCATGTGGTAGCCACGTCACTACCCAAGACCATGTGGCATCAGGACAAGAAAGATCTATG 779
||||||||||||||||||||||||||||||||||.|||||||||||||.|||||||||||||||||||||||||
Sbjct 889 CAAGACCAACAGGAGCATGTGGTAGCCACGTCACAACCCAAGACCATGGGGCATCAGGACAAGAAAGATCTATG 962
Query 780 TGGGCAGTGTTCGTCCTTAGGCTGCCTCATCCGGATATTGATTGATGGGATCTCTCTCGGGCTCACCCTGCGCC 853
||||||||||||..|.|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 963 TGGGCAGTGTTCCCCGTTAGGCTGCCTCATCCGGATATTGATTGACGGGATCTCTCTCGGGCTCACCCTGCGCC 1036
Query 854 TCTGGGACGTGTATCTGGTAGAAGGCGAACAGGCGTTCATGCTGATAACAA-AATCGCCTTTAAGGTTCAGCAG 926
|.|||||||||||||||||||||||||||||||||||.||||.|||||||| ||||||||||||||||||||||
Sbjct 1037 TGTGGGACGTGTATCTGGTAGAAGGCGAACAGGCGTTGATGCCGATAACAAGAATCGCCTTTAAGGTTCAGCAG 1110
Query 927 A---------AGC-----------------------------GCCTCAC-------GAAGA------------- 942
| ||| ||.|||| |||||
Sbjct 1111 ACCAAACCCGAGCAAGGGTCGTCGGCATCCAGGCCTGTGCCGGCTTCACGTGGCGGGAAGACCCTCTGCAAGGG 1184
Query 943 -------------CGTCCAGG-----------------TGTGGCCCGT--------------------GGGCA- 965
|.|||||| .|.|||||.| |||||
Sbjct 1185 GGACAGGCAGGCCCCTCCAGGCCCACCAGCCCGGTTCCCGCGGCCCATTTGGTCAGCTTCCCCGCCACGGGCAC 1258
Query 966 --CGTTTTT--GGAACCGGTTCGTTGATGCCTGGGC---CAGGGATGA----TGACACTGTG----CTCA---- 1020
||||.|| ..|.||.||.| ||.|| |||| |.||||.|| | ||.||||| ||||
Sbjct 1259 CTCGTTCTTCCACACCCTGTCC--TGGTG---GGGCTGTCCGGGAAGACACCT-ACCCTGTGGGCACTCAGGGT 1326
Query 1021 --------------------------AGCATCTTAGGG--CCTCTA---------------------------- 1038
||.|.||.|||| |||..|
Sbjct 1327 GTGCCCAGCCCGGCCCTGGCTCAGGGAGGACCTCAGGGTTCCTGGAGATTCCTGCAGTGGAACTCCATGCCCCG 1400
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1401 CCTCCCAACGGACCTGGACGTAGAGGGCCCTTGGTTCCGCCATTATGATTTCAGACAGAGCTGCTGGGTCCGTG 1474
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1475 CCATATCCCAGGAGGACCAGCTGGCCCCCTGCTGGCAGGCTGAACACCCTGCGGAGCGGGTGAGATCGGCTTTC 1548
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1549 GCTGCACCCAGCACTGATTCCGACCAGGGCACCCCCTTCAGAGCTAGGGACGAACAGCAGTGTGCTCCCACCTC 1622
Query 1039 ------------------------------------------------------- 1038
Sbjct 1623 AGGGCCTTGCCTCTGCGGCCTCCACTTGGAAAGTTCTCAGTTCCCTCCAGGCTTC 1677
