Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13694
- Subject:
- NM_001144978.2
- Aligned Length:
- 1053
- Identities:
- 420
- Gaps:
- 627
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACGGTGCCGGTCCGCGGCTTCTCGCTGCTCCGCGGCCGCCTTGGCCGAGCGCCGGCGTTGGGCAGAAGCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCACCCTCCGTAAGGGCACCGGGAGAGCCCGGGAGTGCGTTCCGGGGCTTTCGGAGCAGCGGTGTGAGACATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCCATTATTATATCAGGAACCGAAATGGCCAAGCATATCCAGAAAGAAATACAGCGAGGTGTGGAATCATGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTTCCCTTGGAAACAGAAGACCTCACCTCAGTATAATTTTAGTGGGAGATAACCCAGCAAGCCATACATATGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGAATAAGATAAGAGCTGCCTCTGCTGTAGGTATTTGTAGTGAGCTCATTCTAAAACCTAAGGATGTTTCTC 370
Query 1 -----------------------------------ATGGACCCAAGAGTCAGCGGTATATTAGTTCAGTTACCA 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGAAGAACTTTTGGACGTAACTGATCAATTGAATATGGACCCAAGAGTCAGCGGTATATTAGTTCAGTTACCA 444
Query 40 CTACCAGACCACGTTGATGAGCGAACAATATGCAATGGAATTGCCCCAGAAAAAGATGTAGATGGATTTCATAT 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTACCAGACCACGTTGATGAGCGAACAATATGCAATGGAATTGCCCCAGAAAAAGATGTAGATGGATTTCATAT 518
Query 114 TATCAATATTGGAAGATTGTGCCTTGATCAGCATTCTCTCATACCTGCCACTGCCAGTGCTGTTTGGGAAATAA 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TATCAATATTGGAAGATTGTGCCTTGATCAGCATTCTCTCATACCTGCCACTGCCAGTGCTGTTTGGGAAATAA 592
Query 188 TAAAAAGAACAGGAATTCAAACATTTGGAAAAAATGTGGTTGTGGCTGGAAGATCCAAGAACGTAGGGATGCCT 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TAAAAAGAACAGGAATTCAAACATTTGGAAAAAATGTGGTTGTGGCTGGAAGATCCAAGAACGTAGGGATGCCT 666
Query 262 ATTGCCATGCTTTTACACACTGATGGAGAGCATGAACGGCCAGGAGGTGATGCAACTGTGACAATAGCTCACAG 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATTGCCATGCTTTTACACACTGATGGAGAGCATGAACGGCCAGGAGGTGATGCAACTGTGACAATAGCTCACAG 740
Query 336 ATACACCCCCAAAGAGCAACTGAAGATTCATACGCAGCTGGCAGATATTATCATAGTTGCTGCAG--------- 400
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATACACCCCCAAAGAGCAACTGAAGATTCATACGCAGCTGGCAGATATTATCATAGTTGCTGCAGGTATTCCAA 814
Query 401 -------------------------AGA----------------------GATTTCACCATTTTGCCCAGGACC 427
||| |.|.||| |.|.||.|||.||
Sbjct 815 AGTTGATTACGTCTGATATGGTTAAAGAAGGTGCTGCTGTAATTGATGTGGGTATCA--ACTATGTCCACGA-- 884
Query 428 TCTCCAACTCC--------------------------------------------------------------- 438
|||
Sbjct 885 --------TCCAGTGACAGGAAAGACAAAATTAGTTGGAGATGTGGACTTCGAAGCTGTTAAAAAGAAAGCTGG 950
Query 439 -------------------------------------------------------------------------- 438
Sbjct 951 CTTTATCACTCCAGTTCCAGGAGGTGTGGGACCCATGACAGTGGCAATGCTTCTGAAGAACACCCTTCTGGCAG 1024
Query 439 ----------------- 438
Sbjct 1025 CTAAAAAAATCATTTAC 1041