Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13694
- Subject:
- XR_001741222.2
- Aligned Length:
- 2849
- Identities:
- 418
- Gaps:
- 2427
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACGGAGACTGTTGGGCAGGATCTCTGGCTTGGTGGAAAGTGGGGCGTGCTGCCTAAAGTGATAGTTTGGAGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTCTCTGTGCCGTCGCTATGGGAATGCCAGCTATATGTTGGCTGGGTGCGGGGCCCAGTCGCCAGGCCACACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACGCTTCCACATCCTCAGAGGGCCCGGGACTTGGGTCCTGGCCCCGCCCCCTGCGGACCCGGCACTCTGTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTCCGTCCCCGGTCCTGGGAACCGCTCTTTACCCCACTCTGCGTGTCTGCCGGAACCTGGCTGGGAAGCGCTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTGCTGCCCTGCCAGCCCGGGTGAGGGCGGAGCCAGGCCTCCAGCCGCGAGGACTGGAGTCGCGGGAGGTGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCCCAGTCCGGAAGCCGGGGATCCGCGGCCATGACGGTGCCGGTCCGCGGCTTCTCGCTGCTCCGCGGCCGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTGGCCGAGCGCCGGCGTTGGGCAGAAGCACAGCACCCTCCGTAAGGGCACCGGGAGAGCCCGGGAGTGCGTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGGGGCTTTCGGAGCAGCGGTGTGAGACATGAAGCCATTATTATATCAGGAACCGAAATGGCCAAGCATATCCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAAAGAAATACAGCGAGGTGTGGAATCATGGGTTTCCCTTGGAAACAGAAGACCTCACCTCAGTATAATTTTAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGGAGATAACCCAGCAAGCCATACATATGTCAGGAATAAGATAAGAGCTGCCTCTGCTGTAGGTATTTGTAGT 740
Query 1 ------------------------------------------------------------------ATGGACCC 8
||||||||
Sbjct 741 GAGCTCATTCTAAAACCTAAGGATGTTTCTCAGGAAGAACTTTTGGACGTAACTGATCAATTGAATATGGACCC 814
Query 9 AAGAGTCAGCGGTATATTAGTTCAGTTACCACTACCAGACCACGTTGATGAGCGAACAATATGCAATGGAATTG 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAGAGTCAGCGGTATATTAGTTCAGTTACCACTACCAGACCACGTTGATGAGCGAACAATATGCAATGGAATTG 888
Query 83 CCCCAGAAAAAGATGTAGATGGATTTCATATTATCAATATTGGAAGATTGTGCCTTGATCAGCATTCTCTCATA 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCCCAGAAAAAGATGTAGATGGATTTCATATTATCAATATTGGAAGATTGTGCCTTGATCAGCATTCTCTCATA 962
Query 157 CCTGCCACTGCCAGTGCTGTTTGGGAAATAATAAAAAGAACAGGAATTCAAACATTTGGAAAAAATGTGGTTGT 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCTGCCACTGCCAGTGCTGTTTGGGAAATAATAAAAAGAACAGGAATTCAAACATTTGGAAAAAATGTGGTTGT 1036
Query 231 GGCTGGAAGATCCAAGAACGTAGGGATGCCTATTGCCATGCTTTTACACACTGATGGAGAGCATGAACGGCCAG 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGCTGGAAGATCCAAGAACGTAGGGATGCCTATTGCCATGCTTTTACACACTGATGGAGAGCATGAACGGCCAG 1110
Query 305 GAGGTGATGCAACTGTGACAATAGCTCACAGATACACCCCCAAAGAGCAACTGAAGATTCATACGCAGCTGGCA 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAGGTGATGCAACTGTGACAATAGCTCACAGATACACCCCCAAAGAGCAACTGAAGATTCATACGCAGCTGGCA 1184
Query 379 GATATTATCATAGTTGCTGCAGAGAGATTTCACCATT---TTG-------CCCAGGACCT-CTCCAACTCC--- 438
|||||||||||||||||||||| |||| ||| .||.|| || .|.||| |
Sbjct 1185 GATATTATCATAGTTGCTGCAG-----------CATTGTATTGTTGGTGTTCCTGG--CTAATGCAA---CAAG 1242
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1243 TTGACAGACATGAGTTAGGAGACAAAGACTTCTAAGAGGAGACGAGGTGGTGTTCTTTGAAGGTATTCCAAAGT 1316
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1317 TGATTACGTCTGATATGGTTAAAGAAGGTGCTGCTGTAATTGATGTGGGTATCAACTATGTCCACGATCCAGTG 1390
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1391 ACAGGAAAGACAAAATTAGTTGGAGATGTGGACTTCGAAGCTGTTAAAAAGAAAGCTGGCTTTATCACTCCAGT 1464
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1465 TCCAGGAGGTGTGGGACCCATGACAGTGGCAATGCTTCTGAAGAACACCCTTCTGGCAGCTAAAAAAATCATTT 1538
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1539 ACTAGATCACATGAAAGGATAAAGCAAACTGAAGTCATGCTATTTGTTTATTTGACAAAGGGTAAAACCTTTAT 1612
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1613 ATTTTACTACAAAGCTATTTATTTCTACATGGTATTTATTTTTTCATGGGTGAAATCATTGTGAATCAATTGAT 1686
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1687 TCACATAGTTTTATGCATTTCCTGCTAATTTATTTTGAGTTTTAAGAAAACAACCAAAACAATTCCAATGAAAA 1760
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1761 TTTTAGTAACAATTGTTTATTTTGAGGGTATTTGTTCATAACATTAAAACAATAAAGGGCTCATAATAAATAAA 1834
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1835 TATATTTTTGACACAATTAAATATTACATAGAGTATGTTTACAACAAATATCCTGTCAGCCAAATGGTTACCCA 1908
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1909 TATAAAATGTAATTTAGGTTTTGCTACTTGCATGCTAACATTTTTAATGTATTTTATGATCTATGTCATATATT 1982
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1983 AAAAAAGAGCTTGCTTACTACAAGAAAAATATTGAAATATTGAAAATATTGAAAATATTATTATTGAAAATAAA 2056
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2057 ATCTTGATCTCAACTATCCCCCAAATGCATCCTATAAGTCCATCCTAATGAGAAATGATGTTCTATTTAAGGAA 2130
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2131 AGGAAAATATTCCGGGAAGGCAAAAAATGCAGTGCTGTTTGGAAGTGTAATGATTTTATCACATGGTGAATGAC 2204
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2205 TACTAAGAGTAATGATTATATCACATTGTGAATGACTACTTGCCACAGTAAAAATACATGAAGAATGTGTTAGG 2278
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2279 TTTAAACGTCGTTTCTTTCTTCTAAAAAATATTTGGTTAGTACCTTCACTGAGCAATAGTGGAAAAATAAAAAA 2352
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2353 ATAAGTAAACAGAAAAAACTAAAGTTGTATTTTCCCACAAATATAGTATGAATGAGGTCATATTAAAGAACAGC 2426
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2427 AACTGTTAATGTTTGTTCACAAATTCAGAAATCTAATAGGAAAACATGATACTTTCAATGTGCCAAAACTAAAC 2500
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2501 CTTAGTATACAACTAAAAATCTCCTGCCTTCTTGCCTACCTGTCTTCCCTCTTCTGTTACAGAATTTGTTCCTC 2574
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2575 AAAGTAGATGCAATGTTTCTAACACAATTTAAATTAGGAAATATATATGAATGTCGTTGAAGTCTATTTTGAGA 2648
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2649 CTGCTAAAGCTATTAATTGATACTGTGTTTTTATGCCCAAATCCCAGTATGTTTATGTACCAATAATGACTCTT 2722
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2723 ACCCAGCGCATGTCTTTATCAGTGTGTACTCGTGACGATTTGTGTGAAAATAGACTTGATGTTTATAATTAATA 2796
Query 439 ------------------------------------- 438
Sbjct 2797 CCATTACAACTGTATAATAAAAGCAATTTGAAGAAAA 2833
