Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13730
- Subject:
- NR_003525.2
- Aligned Length:
- 6454
- Identities:
- 182
- Gaps:
- 6259
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCAGGCTGGAATGCAATGTTGCGATCTCGCTTCACTGCAGCCTCTGACTCCCAGGTTCAAGCGATTCTCCTGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAGCCTCCTGAGTAGCTGGGATTACAGGTCAGTTTCTCTCCCTGGAAGGAAGAGTATTCTCGGATTTCAAAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGGAGGAAGAGTTCAGGCTGCCAGAAGTGGACTAGCACTTCTGAATATCCGGAGGCGAGGTCGCCTGACTTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGGGAAGCTCTGCAGTGCCCCCACCCCACCCTACCCCACCACTGCAGGCCCTGGAGTCCTGGGACCACCCAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTGCGACCCAAATCCTTCCTCGCTAAGGGGAGGGGAGGGGGTTCCGGGGGGGCGGGATGGGAAGGGGTGCTTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GACAGGATTGTGACATAAGATTGCCATGGTGACATGGAGCAGATTTAGACCCGAGCCTAATAAAGGTGGCATTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATAAAGGTGTCATAAAGACAGGGCAGGGCGCACGCTTATAAGGGACACGAGCGTTTCGGGGCTGCCAGAATGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCTCGCTCACTGCGCGGTGCCAGCATGTGTCATGTCCCGGCTGTGTTTCTGGGGCCTATGGCCCCTGCTCACG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGCAACTATTGTGGCTACTAGTCAAGGAGGCTCAGCCTCTGGAGTGGGTCAAGGATCTGCTCCAGCTGACCTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TAACCCCCGGGGGCCGCCTGAGCCCTGGTCTTCCGCTCCTCCCATCTCCCATGGGAATCTCCCCATGCCCCTAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCCCCAGCAGATCCGGGGGACTTTGATTACCTGGGGCCCTCTGCTTCCTCGCAGATGTCAGCCCCACCCCAGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AATCAACTGAAAATTTGGTTCCATTCCTGGACACGGATTCAGCTGGAGAGCTGCCCCTAGGGCCAGGGCAGTTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAGTTGCACACCAGGATTTCAATGACAAGCTGACTCTGCAAGAAAGGCTCCCAGAGGTGGTTCCAATGCTGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGGGATCAGAACCAGACCCTAGTTCAGCCTCCTCGCCTCAAAAGTAAGGTTCAAACTGCAGATCTAGATGGGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGCAGGTCATCAGGCAGATGAAATACTTGTTCCACTAGACAGTAAGGTTTCAAAACCAACCAAATTTATTTAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTTTGTTTCACCCAGGAACCTGAAGAAAGATCTAGCTCAGCATTGGAGCATTGCTGATATTGTTGGAATTCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGCAATTATCCAAACCACAGCGTTAGAAACAGACTTTGCAGGATGAATATTCGAGTATGGATACACAGTATCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGCAGCCTGCCTCCAGAACTCCGGGTGAACTCAGATGAGCCTCCAGGGTCCCCTGAGTAAGTTGGACTTTCTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATTCCATCTAGAGCCTGAAACTCAAAATCCAGAGACCCTTGAAGATATCCAGTCCTCTTCACTCCAGGAAGAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCCCAGAGCAGCTTCCACACCTCCTTCTTCAACCCAGCAGGAGGCCCCAGCTCTGCCTCCAGAGTCCTCTATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GAGAGTCTAGCTCAAACTCTACCAAATCATGAGGTGACAGTTCAACCTCCAGGTGAGGATCAAGCTCATTATAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTTGCCCAACATTACAGTTAAACCTGCAGATGTGGAGGTTACCATAACTTCGGAGCCTACCAATGAGAAAGAAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTTCCCAAGCCCAGCAGGAGGCTCCAGTTCAGTTTCCAGAGGAGGTGGAACCTTCTGCAACCCAACAGTAGGCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCAACCGAGCCTCCATGTCATCCTACGGAGCGTGAACTTTCCATTAGTGAGCAGGAGCAGCCAGCTCAGCCTTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGAGTCTTCTGGGGAGGTTGAATCTTCTCAGACTCGGCAGGAGACCCCAGCTCAGCCTCCAGAAGAGATGGAAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTCCTGCAAACCAAGAGGAGGCCCCAACTGAGCCTCCAGGTCCTCCTGTAGAGCCTGAACTTTCCCCCAGTGAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAGGAGCAGCCAGCTCAGCCTTCTGGGGAGGTTGAATCTTCTCCAGCCCAGCAGGAGACCCCAGCTCAGCCTCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGAACATCATGAAGTCACCGTTTCACCTCCAGGTCACCATCAAACTCAGCATTCAGATTTGCCCAATGTCTCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTAAGCCTCCAGACATGCAGCTCACCATAGCAACAGAGCCTAGTGCAGAGGTGGGAACTTCTCCAGTCCACCAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAGGCTACAGCTCAGCTCTCAGGACCAGGTAATGATGTAGAACCTCCCACTATCCAGCACGGGGGCCCACCTCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCCTCCAGAGTCACCGGAAGATGCTGGACCTTTAGCAATTCAACAGGAGACTTCAGTTCAATCTCCGGAACCTA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTAATAATGAGAACCCCTCTCCAACCCAGCAGGAAGCTGCAGCTGAGCATCCACAGACTGCTGAGAAGGGTAAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCTTCTCTAACCCAGCAGGAGGCCCCAGCTGAGACTCCAGAGCTCCCTAATGTAGTTGTAGCTCAATCTCCGGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACATTCAAACCTGACTCAAGCCACAGTTCAACCTTTGGACCTGGGGCTTACCATCACTCCAGAATCCACAACAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAGTTGAACTTTCTCCAACCATGCAGGAGACCCCAACTCATCCTCCTAAGAAAGTTGTACCCCAACTTCCAGTA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TATCAAGAGGTTACAATTCCAACACCAGGTCAGGATCAGGCTCAGCATCCAATGTCACCCAGCATTACAGTTCA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACCTTTGGACCTGGGACTTACCATCACTCCAGAACCCACTACGGAGGTTGGACATTCTACACCCCTGAAGAAGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ATGTAGTTCCTCCAAAGCACCCTAAGGTGACACTTCCACATCCAGACCAGGTTCAGACTCAGCATTCAAACCTG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACTCAAGCCACAGTTCAACCTTTGGATTTGGGGCTTACCACCACTCCAGAATCCACAACAGAGATTGAACCTTC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGCAGCCCTGACGACTACAGCTCCTCCTCCAGAACACCCTGAGGTGACACTTCCACCTTCAGACAAGGGTCGGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CTCAGCATTCAAACCTGACTCAAGTCACACTTCCACCTCTGGACCTGGAGCTTACCATAACTACAGAACCTACT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ACAGAGGTTAAACCGTCTCCAACCACGGAGGAGACCTCAACTCAGCCTCCAGACCTGGGGCTTGCCATAACTCC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AGAGCCCACTACAGAGACTGGACATTCTACAGCCCTGGAGAAGACTACAGCTCCTCATCCAGACCAGGTTCAGA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTCTGCATCGAAAACTGACTGAAGTCACAGGTCCACCTACTGAACTAGAACCTACTCAGGATTCACTGGTGCAG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TCTGAAAGTTACGCCCAAAATAAGGCTTTAACCGCACCAGAGGAACAGTAGGCCTCCACAAGCACCAACATATG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TGAGCTCTGTACCTGCGGAGGTGAGACGCTGTCGTGTATTGATCTCAGCCCAAAACAGAGGCTCTGCCAAGTGC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CTGTGCCAGAGCCCAACACCTACCATGGCACCTTCACCATCTTAAATTTCCAAGGAAACTATATTTCTTACATT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GATGGAAATGTATGGAAAGCATACAGTTGGACCGGGAAACTAATTCTCAATGAAAATTATTTGACTGAATTACA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TAACGATTCATTTAAAGGCCTGCTATCCCTCCAGTATTTAGATTTATCCTGCAATAAAATACAGTCTATCGAAA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GACATACATTTGAACCACTACCATTTTTGCAGTTTATAAATCTTGGTTGCAATTTACTCACAGAACTGAGCTTT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GGAACATTTCAGGCCTGGCATGGAATGCAGTTTTTACACAAGTTAATTCTCAATCGCAATCCTCTGACAACTGT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TGAAGATCCATATCTCTTTAAATTGTCAGCATTTAAATATCTAGACACGGGAACAATGCAAGTCCCACTTACAA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CAATTGAGAACATTCTCGTGATGACTGTTGAACTGGAGAAACTGATCTTACCTAGCCATATGACCTGCTGCCTC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TGCCAATTTAAAAATAGCACTGAGGCTGTCTGCAAGACAGTCAAGCTGCATTGCAGCAGTGCATTTCTGACAAA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CACCATACATTGTCTGAAGAAGCATCTGTAGAGAATCCAGGAGTGTTCATGAAGGTGTTACAAGCCCAGAAGAA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GCACACGAGCACTGAGCTGACTATTGAGCCGGAGGCAGCCTCAGACAGCAATGGCATCAATTTGTCAGGCTTTG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GGAGTGGGCAGCTAGACACCAATGATGAGAGGGATGTTATCAGTGCACTAAGTTACATCTTGCTTTATTTCTCA 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GCGGTAAATCTAGATGTGAAATCAATGTTGTTACCCTTCATTAATCTGCTTTCTTCAAATGTGCAAGATGGAGA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 TAGGCTCCTGGGTATTTTGAATAACAATACAAAGAGCCCCTCTCTTCAACCTGCATCCAACAACTCAACTTATG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 AAAATAAATTGAGAAAGCTGTATTTGCTGGAAAGTATGTTAGATGCAGAAATACAAGAAAAAATTGATGAAGTT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 AAAAGGGAAGAAAAAACTGCCATGCTTATGCAGTCCAGCCTTCTAGGTAACAAATTTAAATGCCAAATATTTGA 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 AAAGAAATTAGAAACTATCTAACCACAGGAAAGCAGCCTGGCAAAGATTCAAAGTGTAGGCAAAAACCTGCAGA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GAGTGAACAGAGTCCTCATGGGCCCAAGGAGCATCTTGAAAAGGCACTTCAAAGAGGTGGAAAGCAGAGGATCA 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 GGAGGGAACAGGGTGCCCAGGCATTTGCAGAGAACGCTGCCAAAGAAAAAAGGCTCGGGAGTCCAGCCCCAAGG 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 GAGCTGAGACAGCCTCACATAGAGCAGGGGCCTGACAAGTTAGTGGGAAACACCATCTACACCAAGCCTTCATT 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 CATCCAAGAGCATAAGGCCGCAGTCTCCTCTGTGCTGAAACCCTTCTCCATGGGTGTGCCTTCTGCCTCCACCC 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 CTGCAAAAGCCCTACCTCAGGTCAGAGACAGAGCAAAAGACTTAACCTACACCATTTTCATTTTAGAAAATGCA 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 AAGGCTAGAGTTAAAAATATGAAGGCTGCTAAACCAATCGTACATTCCAGAAAAAAATACTGCTTTCATAAAAC 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 TTGCTCCCGCATGGCCCACAGAACACTCAAGGCCAAAAAGAGTCCAAAGTTCAGAAAGAAAAATTACCTCATTA 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 GACTGATGCTCGCAAAGAGGCCTCCATTCTCTGCAGTGAAGAGCCTCATAAATTCCCTTTCCCAAAGGGCTTTT 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 TCATCTTTAGGAGACCCGAGTCCTCAGGAAAATCCTTTTCCAGAAGTATTTGCTCCTTCAGAACGTTTTATAGA 5254
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5255 AAACACTAATGTAAAAAACACAACTGCAAGAAATGCCTTTGAAGAAAACATTTTTATGGAAAACACTACTAGGC 5328
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5329 CATAAGGCACCATCTCTGAAAACACAACCCACAATCATCCTCCTGAGGCAGATTCCGCTGGGACTGCATTCAAC 5402
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5403 TTAGGGCCAACTATTAAGCAAACTGAGACAAAATGGGAATACAACAACGTGGGCACTGACCTGTCCCCCGAGCC 5476
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5477 CAAAAGCTTCAATTACCCATTGTTCTCGTCCCCAGGTGATCAGTTTGAAATTCAGCTAACCCAACAGCCACGTT 5550
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5551 CCCTCATCCCCAACAACAATGTGAGAAGGCTCATTTCTCATGTTATCCGGACCTTGAAGATGGACTGCTCTGAG 5624
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5625 ACCCATGTGCAATTGACCTGTGCCAAGCTCATCTCCAGGACAGGCCTCCTGATGAAGCTTCTCAGTGAGCAGCA 5698
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5699 AGAAGTAAAGGTGTCCAAGGCAGAATGGGATACGGACCAGTGGAAAACTGAGAACTATATCAATGACAGCACAG 5772
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5773 AAGCCCAGAATGAACAGAAAGAGCAGAAGTCGAGTGAGCTCACAAAAGAAGTTCCAGGATATGGCTATAACAAC 5846
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5847 AAACTCATCTTGGCAATATTTGTGACCGAAATACTAACGACTTTGATTATAATTTTTTGCCTCATTGAGATTTA 5920
Query 1 --------------------------ATGAAGAAGGATTCTCAAGGGGCATTTTCAGGTTTCTGCCACGGAGGA 48
|||.|||||||||||||||||||||||||||.||||||||||.|||||
Sbjct 5921 TTCTCACCGATGGTCATCACAAGAAGATGGAGAAGGATTCTCAAGGGGCATTTTCAGATTTCTGCCACAGAGGA 5994
Query 49 GATGCTCTTCACGAAGGGAG--------------------AGTCAGACGGCCGCTCTGGCTTAAAGATATGTAC 102
||||||||||||||||.||| |.||||||.|||.|||||||||||||||||||||
Sbjct 5995 GATGCTCTTCACGAAGTGAGACTCAGGATGAATCTTTCTCATTCAGACAGCCACTCTGGCTTAAAGATATGTAC 6068
Query 103 AAACCTCTCAGTGCCACAAGAGTAAATAATCACGCATGGAAGCTGCACAAGAAGTCATCTAATGAGGACGAGAT 176
|||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||.|||||
Sbjct 6069 AAACCTCTCAGTGCCACAAGAGTAAATAACCAGGCATGGAAGCTGCACAAGAAGTCATCTAATGAGGATGAGAT 6142
Query 177 CCTCA----------ACAGGG--ACCC----------TGGG--------------------------------- 195
||.|| ||||.| |||| .|||
Sbjct 6143 CCCCATCTGATGAGGACAGCGAAACCCCAACAGAGAACGGGGAGGAGAGTGAAGCCCTGCCACGGGAGGAGAAC 6216
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6217 ACAGAGTGACCCCAGCCCACCTCAGGCGTCCTGCAAAAATACTTAGCGTAAACAACAAGGGCCATCAGAAAGAA 6290
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6291 AAGCAGGACTGAAGCCAGCGGCCCACGCATCCACAGAGGCAGCCGGCGGAGGAAGCACAGGGCCGTCGTTCCCT 6364
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6365 CCTTTGTTTCCCAGTCTAATTAATCACCCAGACCTGAAAACATATCCTCAGGGGGTGGAGATTTTACAATTAAA 6438
Query 196 ---------------- 195
Sbjct 6439 TACCATTGTTCTTGGT 6454
