Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13766
- Subject:
- NR_135755.2
- Aligned Length:
- 6176
- Identities:
- 220
- Gaps:
- 5935
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGGTGAGTAGAGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGCCTCGTCGGGTGATTCAAGTGGCGAGGCTCTCTGACCCGGCCCCCCGGCGGGGACGCCCCAGACGTGGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCCAAAGCGTCCGGGTCGCGGCGAGTGGGACAGCGGAGCCGTCCGGGCCTCGGGTGGCCACAGCTGCCGGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCCTCCCACTCTGCGGCCCGCGGCCCCTGGGACCCGAGAACCCTGATACCGGGTCCGTGAAATCCCTGCTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGGCTCGCTGCTTCCCAACTGTAACGATCTCAGTGGCTGGCTAACTCGGGCGAAACGGCGTGTGTTTTGCCTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGACTCTGCCAGTGTTTGTTACCACAGCTGAGAAAATAGCCTTTTACAAATGCTTTTAATATGTAGCTTATAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTCTAATCTCCAGCGTTAGGAAATTGGAATGCGTATTCTACTAAATTGAGTACGGGGAGAAATGGACCAATTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTGTAAGACGATCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGATACCTGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AATGCCTTAGAAATTGTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTGCAATTCCTACCTCCAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGAACTACAGTATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TATGAGAGGGCTGTATCATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAACACTCAAGAACCTCAGGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTCACCCTTCCCCCAAGTTGGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTTTTTCCTTTTTATGTGAGTGTGTCTTTTACAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAACCATTTAGATTGATGGGCCTCCCCAAATCTAATTTAAAGCAAGTTTCCGGTCCTTGGAGAACAGTGACTTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATCATCTAGCCAGATTCCCTTTTGAACACACATACCTTCAGTGATGCTTCCTCTCCTCTCCCCTCCCTTGCTTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCATGGAGGCTCAGTGAGGGTCCCAGAGCACACACCCTCTGGAAAGTTCCAGCCTTGTTTATACGTTCTACAGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTAGCAACAGACTTTTGTGAGGGATTTTAAAAACAAAAATGTAGATTGTAATGAAATACACTTCCTGTTTTTTA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AAAGTGTTTGCAGAAAAATGATTTTTGAAGTTTTTAAATTTCCTGATAAGATTTTTTTTATATGAGAAGAATTT 2294
Query 1 ---------------------------------------------------------------ATG-----GGG 6
||| |||
Sbjct 2295 GAGGAATATTTGAAGCTTTACAAGATCTGATTTTTTTCTTTCTCAATATAAAGTTTCCATACAATGAGAAAGGG 2368
Query 7 GGCGGAGTGAGCGGTGAACACAC--TGAACAGAA----------------TCTGA---------GAT----TTA 49
||.|.| ||||||| |||| |.|| |.||| ||| ||.
Sbjct 2369 GGAGAA----------AACACACATTGAA-ATAAGACCTCCGTGTTCTTTTTTGATGGGTTTATGATTCAGTTT 2431
Query 50 ATAAGCC--------AAA--------TCAACAATGTGGGAAG--TTC-----------------GTTTTGTTTT 88
||| | ||| ||| .|||| |.||| ||| |||||.||||
Sbjct 2432 ATA---CTGACTTTGAAATATTTTTGTCA--CATGT-GAAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTTT 2499
Query 89 -TTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGCAGTGCAATGGCACGATCTCGGCTCACTGCAAGC 161
||.||.|||||||||||||||||||||||.|||||||||.||||||.||||..||||||||||||||||||||
Sbjct 2500 GTTGTTGTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGC 2573
Query 162 TCCGCCTCTCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCCCAGTAGCTGGGACTACAGGCGCCCGCCACCAT 235
||||||||.|.||||||||||||||||||||||||||||.||.||||||||||||.|||||||||||||||||.
Sbjct 2574 TCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCAC 2647
Query 236 GCCCGGCTAATTTTTTGTATTTT--------------------------------------------------- 258
|||||||||||||||||||||||
Sbjct 2648 GCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGA 2721
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2722 CCTCGTGATCCGCACGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCACTAC 2795
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2796 TGGTTTTTAACAGGATGATTCAAAGTACAGCCCGTGCACATTTACTTCGTCACCTGGTGCACCACACTGTCTTC 2869
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2870 ATGTTGGCCCTCGTTTCTTGTATACTTAGCTTACTGCCCAGATGCAACTGAGAAAATACAGGAAAAGCAGGTCC 2943
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2944 AAATTCAGCCTTCGACTTCTGCAAAAGTCCATAAACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACTC 3017
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3018 TTCATGAAGAAGTCACGTATTTGCTCTTCCTTTCAAAGGATGGCATTTTAATGTTGCTTTGCTGCCAGATGTTC 3091
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3092 ATCTGCTTGCTGTGAAGTGATTCTTTTTTTAAAATGTTTTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTGA 3165
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3166 ATGGAGAACCAAGAATTTGCTTGGTAGAAAAATTATTTTTTTTTAATTTCAGACTTATCAAAAATTTGGTTGAG 3239
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3240 GGAATTTTTATTAGCTGCCCTGACTTTATAATGCTACGCTCTTAACAGTGCCAAAAATCCTACATAGTTACTGA 3313
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3314 CAAATGTGTGATCTTTTTACAGTCACAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGC 3387
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3388 AGAAAGTTACCGTGTGTTCCCACTGTATCTGCACTGTTCTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCTA 3461
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3462 TTCAGCCTTAACATTTCAAAGGCTTATAGTAAAATAGGAACTGAAGATCTGTATCAAAATGTAACACTTTCATC 3535
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3536 CTTTGGAATAATTGAAGTTTAACATAACCTCTACATGTATATAAGTTAGCTGGTGAAAATGTGGCATGAAACTT 3609
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3610 CACAATTGTGCTTCAGGCCTAAGTGACTGCTACCTATGATTTAAGTGACAGTAAATGTCTTGCTACATTTTTCT 3683
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3684 ATTTCATCCTCTACAATCATATGTCATGGAATGGAGCTATGAAATGTGCTAACTTGGTATTCAGGATTCTCATT 3757
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3758 GTGATAAGGTGATACATTAGTTTTACCTTGTTTGAAATTTTACAAAAATGCTTACAATCCAGGCATTCTTTCTC 3831
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3832 TACCTATTATGAACTACGGTGTGTTAAACAACAGCAGTGGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCTT 3905
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3906 AATCCTTGGGTACAGCACCTGAACTTAATTGATGAGAAGTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATTA 3979
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3980 TGGAAATTTTATGCTGGATTTATCGATGTCATTCTTAATCTTTTGATACTATAAAGGAGTCTTACCAACTGGAG 4053
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4054 AAAATTTGCCTACATGCTATATATTTGAATTGTGTCCAAAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATAT 4127
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4128 ATGTTGTTTTCTTGAGCAACAGTTACACTAGGTAGAAAAGTATTCACACAATAATAGTAATGCAAAAAAAGTGA 4201
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4202 GCTACTTGGAAAGTATCATCTCTGTTCAGGTAAGTTTACTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTTT 4275
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4276 AAAGTCCAGGATAGCCTCATGAGCATAGGCCTTCCTATGAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTAC 4349
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4350 CCTATCAGTGTTCTTCAGTATGTCCAATTGTTATCATACCAAAAACCTTAATTACATAACATTGTGTGGATGAA 4423
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4424 ATGCTGCATCTTCAGTTAATACATGTTTTGAGCACATTCTTAAAATACATAATAATTAAATGATCCCTATTCAA 4497
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4498 AAGAACCCTGGCTTGGGTGGAGGATCCACTCTGGCTAACGGATAAGAGTGATGAACTTCTTTGTTACCTGACCC 4571
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4572 TTCTCTTCTGGAAAAGTGAGGTGTACATTAAACATCTTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTCC 4645
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4646 AGCTTGTCCGACTAGTGTAATGTACCTCTCACTTCTGTTTTACGTTGAGCATTACGAATTAAAATCTTTACAGT 4719
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4720 CTAGGGGGAAAAAAAGGCTTCAATACCAGTTGGCTTATGAGGCTCTGCATATAATTTTCTCTAAAATATGTAAC 4793
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4794 TATTTTGTAGTCTGTGGGGACTTTCAAAGCCAATTTTTAAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTGA 4867
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4868 ATGAAAAATCAGAAATTCTAATCTTTGCTATAAAGTACTTAAACACAATACATTGCCTCAGCATAAATAAAAAC 4941
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4942 ATTTTTATTAAGATGATTTATGAACATGGATTTCTAACTGGACCAACACTAATGTTGCAACCTGATAAAATTTG 5015
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5016 AGATGTAAATTCATTTCACAGACTCATAAACACACTCTCTTTAAGACTCTTCTTTAAATGGATCCTTACATTAC 5089
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5090 CCTGCCTGTTTTATTATGCCTTCATTTTTGTGGTTTTCATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTAC 5163
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5164 ATTTCCCAGAAACTCAGTGAATATCTTGCCTTTTCTTCAAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTGA 5237
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5238 AACTAGCTCTATGTCTATCTAAAAATCAAGTCTCGGCAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGC 5311
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5312 CGAGGAGGGCAGATCATCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAGCATGGTGAAACCCCATCTCTACTA 5385
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5386 AAAATACAAAAAATTAGCCAGGCGTGGTGGCGCGCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGA 5459
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5460 ATTGCTTGAACCCGGCAGGAAGAGGTTGCATTGAGCTGAGATCACGCCATTACACTCCAGCCTGGGCAACAGAG 5533
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5534 CGAGACTCCGTCTCAAAAAAAAATCATTCAAGTTTCACTGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCATC 5607
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5608 AGCTAATAGATCTGAAAGTGATGCCGGTGTCTCTAGGAAAGGAATTGATCATAGCCAAGTGACTGACATTCTCT 5681
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5682 CGGTCAGGAAAAGAGCTTGCTTCACAGCCTTTGAAGTATGACTGTATGTGTGGTCCCCTTGTACTTTGGAGACA 5755
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5756 GAAGGTACTGGCAGCGAGTGTGGTGGATGGGCAGAAGGTGTAGCATTCGGAGATTATTTCTGTATGTAATTAAG 5829
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5830 AGACTTTCAAGGGTTAGCCAGACTTTTTTCCACTCAAGTGTGGATTATCTTTGCTACCTGTGTTAAAGAATATC 5903
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5904 AGGTTTTGTTTCTTATTGTGATTTTTGAGTCTAAATGATCCAAGATTTTTAAAATAGATACATAATGAAATCCA 5977
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5978 GGCCTCTGAAAAATTATGGCAACATTCATTTGGAGTGTGGCTAAAAACTCATACTTTATCCAATTTGGTTGCCT 6051
Query 259 -------------------------------------------------------------------------- 258
Sbjct 6052 CTCTCAGTTACTGCAGTTTATAGAATAATTGAGCTTGAACCATGTGAATGCTCAGAATGTCAATGGTGGAGTAT 6125
Query 259 ---------------------------------- 258
Sbjct 6126 TTATTCAAGAGAAATGGCTGAATCTCGATACGAA 6159
