Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13766
- Subject:
- NR_135757.2
- Aligned Length:
- 5843
- Identities:
- 220
- Gaps:
- 5602
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGAAATGGACCAATT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTGTAAGACGATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGCCAGAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAATTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACCTCCAGTACCTCACTGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGTATGTATACGTGGATAACAACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGGCTTCTGTACTGCTGCACA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCTGTTCCCTCTGCTTGGAATGCTCATAACACATTTCCATTTATTCCAGCTGTGGTGCTCCCATTCAAGTTTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCTGTATCATACCTACCACAGCTTGCTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTCTACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GACCTGCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGAGCTAAAATGCCTTCACCCTTCCCCCAAGTTGGAATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTGTTTTTCCTTTTTATGTGAGTGTGTCTTTTACAGAAACCATTTAGATTGATGGGCCTCCCCAAATCTAATT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAAAGCAAGTTTCCGGTCCTTGGAGAACAGTGACTTGATCATCTAGCCAGATTCCCTTTTGAACACACATACCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCAGTGATGCTTCCTCTCCTCTCCCCTCCCTTGCTTTCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGTTTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATGGAGGCTCAGTGAGGGTCCCAGAGCACACACCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCTGGAAAGTTCCAGCCTTGTTTATACGTTCTACAGTGTAGCAACAGACTTTTGTGAGGGATTTTAAAAACAAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AATGTAGATTGTAATGAAATACACTTCCTGTTTTTTAAAAGTGTTTGCAGAAAAATGATTTTTGAAGTTTTTAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATTTCCTGATAAGATTTTTTTTATATGAGAAGAATTTGAGGAATATTTGAAGCTTTACAAGATCTGATTTTTTT 1998
Query 1 --------------------------ATG-----GGGGGCGGAGTGAGCGGTGAACACAC--TGAACAGAA--- 38
||| |||||.|.| ||||||| |||| |.||
Sbjct 1999 CTTTCTCAATATAAAGTTTCCATACAATGAGAAAGGGGGAGAA----------AACACACATTGAA-ATAAGAC 2061
Query 39 -------------TCTGA---------GAT----TTAATAAGCC--------AAA--------TCAACAATGTG 70
|.||| ||| ||.||| | ||| ||| .||||
Sbjct 2062 CTCCGTGTTCTTTTTTGATGGGTTTATGATTCAGTTTATA---CTGACTTTGAAATATTTTTGTCA--CATGT- 2129
Query 71 GGAAG--TTC-----------------GTTTTGTTTT-TTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGG 124
|.||| ||| |||||.|||| ||.||.|||||||||||||||||||||||.||||||
Sbjct 2130 GAAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTTTGTTGTTGTTGAGACGGAGTCTCGCTCTGTCGCCCAGG 2203
Query 125 CTGCAGTGCAATGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCTCAGGTTCACGCCATTCTCCTGCCTCAGC 198
|||.||||||.||||..||||||||||||||||||||||||||||.|.||||||||||||||||||||||||||
Sbjct 2204 CTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGC 2277
Query 199 CTTCCCAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCGGCTAATTTTTTGTATTTT-------------- 258
||.||.||||||||||||.|||||||||||||||||.|||||||||||||||||||||||
Sbjct 2278 CTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGG 2351
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2352 TTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCACGCCTCGGCCTCCCAAAGTGCTG 2425
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2426 GGATTACAGGCGTGAGCCACCGCGCCCGGCCCACTACTGGTTTTTAACAGGATGATTCAAAGTACAGCCCGTGC 2499
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2500 ACATTTACTTCGTCACCTGGTGCACCACACTGTCTTCATGTTGGCCCTCGTTTCTTGTATACTTAGCTTACTGC 2573
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2574 CCAGATGCAACTGAGAAAATACAGGAAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGCAAAAGTCCATAAACA 2647
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2648 GAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTATTTGCTCTTCCTTTCAAA 2721
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2722 GGATGGCATTTTAATGTTGCTTTGCTGCCAGATGTTCATCTGCTTGCTGTGAAGTGATTCTTTTTTTAAAATGT 2795
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2796 TTTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTGAATGGAGAACCAAGAATTTGCTTGGTAGAAAAATTATT 2869
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2870 TTTTTTTAATTTCAGACTTATCAAAAATTTGGTTGAGGGAATTTTTATTAGCTGCCCTGACTTTATAATGCTAC 2943
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2944 GCTCTTAACAGTGCCAAAAATCCTACATAGTTACTGACAAATGTGTGATCTTTTTACAGTCACAACACCTGCTG 3017
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3018 CCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTATCTGCACTGT 3091
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3092 TCTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCTATTCAGCCTTAACATTTCAAAGGCTTATAGTAAAATAG 3165
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3166 GAACTGAAGATCTGTATCAAAATGTAACACTTTCATCCTTTGGAATAATTGAAGTTTAACATAACCTCTACATG 3239
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3240 TATATAAGTTAGCTGGTGAAAATGTGGCATGAAACTTCACAATTGTGCTTCAGGCCTAAGTGACTGCTACCTAT 3313
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3314 GATTTAAGTGACAGTAAATGTCTTGCTACATTTTTCTATTTCATCCTCTACAATCATATGTCATGGAATGGAGC 3387
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3388 TATGAAATGTGCTAACTTGGTATTCAGGATTCTCATTGTGATAAGGTGATACATTAGTTTTACCTTGTTTGAAA 3461
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3462 TTTTACAAAAATGCTTACAATCCAGGCATTCTTTCTCTACCTATTATGAACTACGGTGTGTTAAACAACAGCAG 3535
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3536 TGGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAATTGATGAGA 3609
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3610 AGTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATTATGGAAATTTTATGCTGGATTTATCGATGTCATTCTTA 3683
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3684 ATCTTTTGATACTATAAAGGAGTCTTACCAACTGGAGAAAATTTGCCTACATGCTATATATTTGAATTGTGTCC 3757
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3758 AAAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATATATGTTGTTTTCTTGAGCAACAGTTACACTAGGTAGAA 3831
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3832 AAGTATTCACACAATAATAGTAATGCAAAAAAAGTGAGCTACTTGGAAAGTATCATCTCTGTTCAGGTAAGTTT 3905
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3906 ACTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTTTAAAGTCCAGGATAGCCTCATGAGCATAGGCCTTCCTA 3979
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3980 TGAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTACCCTATCAGTGTTCTTCAGTATGTCCAATTGTTATCAT 4053
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4054 ACCAAAAACCTTAATTACATAACATTGTGTGGATGAAATGCTGCATCTTCAGTTAATACATGTTTTGAGCACAT 4127
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4128 TCTTAAAATACATAATAATTAAATGATCCCTATTCAAAAGAACCCTGGCTTGGGTGGAGGATCCACTCTGGCTA 4201
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4202 ACGGATAAGAGTGATGAACTTCTTTGTTACCTGACCCTTCTCTTCTGGAAAAGTGAGGTGTACATTAAACATCT 4275
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4276 TTTGGTCACCGTGCCTCACTAAGACCTTTCACATTCCAGCTTGTCCGACTAGTGTAATGTACCTCTCACTTCTG 4349
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4350 TTTTACGTTGAGCATTACGAATTAAAATCTTTACAGTCTAGGGGGAAAAAAAGGCTTCAATACCAGTTGGCTTA 4423
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4424 TGAGGCTCTGCATATAATTTTCTCTAAAATATGTAACTATTTTGTAGTCTGTGGGGACTTTCAAAGCCAATTTT 4497
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4498 TAAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTGAATGAAAAATCAGAAATTCTAATCTTTGCTATAAAGTA 4571
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4572 CTTAAACACAATACATTGCCTCAGCATAAATAAAAACATTTTTATTAAGATGATTTATGAACATGGATTTCTAA 4645
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4646 CTGGACCAACACTAATGTTGCAACCTGATAAAATTTGAGATGTAAATTCATTTCACAGACTCATAAACACACTC 4719
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4720 TCTTTAAGACTCTTCTTTAAATGGATCCTTACATTACCCTGCCTGTTTTATTATGCCTTCATTTTTGTGGTTTT 4793
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4794 CATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTACATTTCCCAGAAACTCAGTGAATATCTTGCCTTTTCTT 4867
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4868 CAAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTGAAACTAGCTCTATGTCTATCTAAAAATCAAGTCTCGGC 4941
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4942 AGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGAGGGCAGATCATCTGAGGTCAGGAGTTTGAGA 5015
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5016 CCAGCCTGGCCAGCATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGCGCAC 5089
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5090 CTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGCAGGAAGAGGTTGCATTGAGCT 5163
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5164 GAGATCACGCCATTACACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAATCATTCAAGTTTCA 5237
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5238 CTGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCATCAGCTAATAGATCTGAAAGTGATGCCGGTGTCTCTAGG 5311
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5312 AAAGGAATTGATCATAGCCAAGTGACTGACATTCTCTCGGTCAGGAAAAGAGCTTGCTTCACAGCCTTTGAAGT 5385
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5386 ATGACTGTATGTGTGGTCCCCTTGTACTTTGGAGACAGAAGGTACTGGCAGCGAGTGTGGTGGATGGGCAGAAG 5459
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5460 GTGTAGCATTCGGAGATTATTTCTGTATGTAATTAAGAGACTTTCAAGGGTTAGCCAGACTTTTTTCCACTCAA 5533
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5534 GTGTGGATTATCTTTGCTACCTGTGTTAAAGAATATCAGGTTTTGTTTCTTATTGTGATTTTTGAGTCTAAATG 5607
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5608 ATCCAAGATTTTTAAAATAGATACATAATGAAATCCAGGCCTCTGAAAAATTATGGCAACATTCATTTGGAGTG 5681
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5682 TGGCTAAAAACTCATACTTTATCCAATTTGGTTGCCTCTCTCAGTTACTGCAGTTTATAGAATAATTGAGCTTG 5755
Query 259 ----------------------------------------------------------------------- 258
Sbjct 5756 AACCATGTGAATGCTCAGAATGTCAATGGTGGAGTATTTATTCAAGAGAAATGGCTGAATCTCGATACGAA 5826
