Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13766
- Subject:
- NR_135759.2
- Aligned Length:
- 6064
- Identities:
- 220
- Gaps:
- 5823
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGGTGAGTAGAGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGCCTCGTCGGGTGATTCAAGTGGCGAGGCTCTCTGACCCGGCCCCCCGGCGGGGACGCCCCAGACGTGGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCCAAAGCGTCCGGGTCGCGGCGAGTGGGACAGCGGAGCCGTCCGGGCCTCGGGTGGCCACAGCTGCCGGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCCTCCCACTCTGCGGCCCGCGGCCCCTGGGACCCGAGAACCCTGATACCGGGTCCGTGAAATCCCTGCTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGGCTCGCTGCTTCCCAACTGTAACGATCTCAGTGGCTGGCTAACTCGGGCGAAACGGCGTGTGTTTTGCCTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGACTCTGCCAGTGTTTGTTACCACAGCTGAGAAAATAGCCTTTTACAAATGCTTTTAATATGTAGCTTATAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTCTAATCTCCAGCGTTAGGAAATTGGAATGCGTATTCTACTAAATTGAGTACGGGGAGAAATGGACCAATTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTGTAAGACGATCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGATACCTGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AATGCCTTAGAAATTGTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTGCAATTCCTACCTCCAGATTTAGGTCGATCTCGAGAACTACAGTATGTATACGTGGATAACAACATTCACC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCTGTATCATACCTACCACAGCTTGCTGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGCAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTCTACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACCTGCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGAGCTAAAATGCCTTCACCCTTCCCCCAAGTTGGAATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTGTTTTTCCTTTTTATGTGAGTGTGTCTTTTACAGAAACCATTTAGATTGATGGGCCTCCCCAAATCTAATTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAAGCAAGTTTCCGGTCCTTGGAGAACAGTGACTTGATCATCTAGCCAGATTCCCTTTTGAACACACATACCTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAGTGATGCTTCCTCTCCTCTCCCCTCCCTTGCTTTCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGTTTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATGGAGGCTCAGTGAGGGTCCCAGAGCACACACCCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTGGAAAGTTCCAGCCTTGTTTATACGTTCTACAGTGTAGCAACAGACTTTTGTGAGGGATTTTAAAAACAAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATGTAGATTGTAATGAAATACACTTCCTGTTTTTTAAAAGTGTTTGCAGAAAAATGATTTTTGAAGTTTTTAAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTTCCTGATAAGATTTTTTTTATATGAGAAGAATTTGAGGAATATTTGAAGCTTTACAAGATCTGATTTTTTTC 2220
Query 1 -------------------------ATG-----GGGGGCGGAGTGAGCGGTGAACACAC--TGAACAGAA---- 38
||| |||||.|.| ||||||| |||| |.||
Sbjct 2221 TTTCTCAATATAAAGTTTCCATACAATGAGAAAGGGGGAGAA----------AACACACATTGAA-ATAAGACC 2283
Query 39 ------------TCTGA---------GAT----TTAATAAGCC--------AAA--------TCAACAATGTGG 71
|.||| ||| ||.||| | ||| ||| .|||| |
Sbjct 2284 TCCGTGTTCTTTTTTGATGGGTTTATGATTCAGTTTATA---CTGACTTTGAAATATTTTTGTCA--CATGT-G 2351
Query 72 GAAG--TTC-----------------GTTTTGTTTT-TTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGC 125
.||| ||| |||||.|||| ||.||.|||||||||||||||||||||||.|||||||
Sbjct 2352 AAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTTTGTTGTTGTTGAGACGGAGTCTCGCTCTGTCGCCCAGGC 2425
Query 126 TGCAGTGCAATGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCTCAGGTTCACGCCATTCTCCTGCCTCAGCC 199
||.||||||.||||..||||||||||||||||||||||||||||.|.|||||||||||||||||||||||||||
Sbjct 2426 TGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCC 2499
Query 200 TTCCCAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCGGCTAATTTTTTGTATTTT--------------- 258
|.||.||||||||||||.|||||||||||||||||.|||||||||||||||||||||||
Sbjct 2500 TCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGT 2573
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2574 TTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCACGCCTCGGCCTCCCAAAGTGCTGG 2647
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2648 GATTACAGGCGTGAGCCACCGCGCCCGGCCCACTACTGGTTTTTAACAGGATGATTCAAAGTACAGCCCGTGCA 2721
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2722 CATTTACTTCGTCACCTGGTGCACCACACTGTCTTCATGTTGGCCCTCGTTTCTTGTATACTTAGCTTACTGCC 2795
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2796 CAGATGCAACTGAGAAAATACAGGAAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGCAAAAGTCCATAAACAG 2869
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2870 AAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTATTTGCTCTTCCTTTCAAAG 2943
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2944 GATGGCATTTTAATGTTGCTTTGCTGCCAGATGTTCATCTGCTTGCTGTGAAGTGATTCTTTTTTTAAAATGTT 3017
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3018 TTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTGAATGGAGAACCAAGAATTTGCTTGGTAGAAAAATTATTT 3091
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3092 TTTTTTAATTTCAGACTTATCAAAAATTTGGTTGAGGGAATTTTTATTAGCTGCCCTGACTTTATAATGCTACG 3165
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3166 CTCTTAACAGTGCCAAAAATCCTACATAGTTACTGACAAATGTGTGATCTTTTTACAGTCACAACACCTGCTGC 3239
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3240 CCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTATCTGCACTGTT 3313
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3314 CTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCTATTCAGCCTTAACATTTCAAAGGCTTATAGTAAAATAGG 3387
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3388 AACTGAAGATCTGTATCAAAATGTAACACTTTCATCCTTTGGAATAATTGAAGTTTAACATAACCTCTACATGT 3461
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3462 ATATAAGTTAGCTGGTGAAAATGTGGCATGAAACTTCACAATTGTGCTTCAGGCCTAAGTGACTGCTACCTATG 3535
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3536 ATTTAAGTGACAGTAAATGTCTTGCTACATTTTTCTATTTCATCCTCTACAATCATATGTCATGGAATGGAGCT 3609
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3610 ATGAAATGTGCTAACTTGGTATTCAGGATTCTCATTGTGATAAGGTGATACATTAGTTTTACCTTGTTTGAAAT 3683
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3684 TTTACAAAAATGCTTACAATCCAGGCATTCTTTCTCTACCTATTATGAACTACGGTGTGTTAAACAACAGCAGT 3757
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3758 GGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAATTGATGAGAA 3831
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3832 GTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATTATGGAAATTTTATGCTGGATTTATCGATGTCATTCTTAA 3905
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3906 TCTTTTGATACTATAAAGGAGTCTTACCAACTGGAGAAAATTTGCCTACATGCTATATATTTGAATTGTGTCCA 3979
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3980 AAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATATATGTTGTTTTCTTGAGCAACAGTTACACTAGGTAGAAA 4053
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4054 AGTATTCACACAATAATAGTAATGCAAAAAAAGTGAGCTACTTGGAAAGTATCATCTCTGTTCAGGTAAGTTTA 4127
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4128 CTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTTTAAAGTCCAGGATAGCCTCATGAGCATAGGCCTTCCTAT 4201
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4202 GAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTACCCTATCAGTGTTCTTCAGTATGTCCAATTGTTATCATA 4275
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4276 CCAAAAACCTTAATTACATAACATTGTGTGGATGAAATGCTGCATCTTCAGTTAATACATGTTTTGAGCACATT 4349
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4350 CTTAAAATACATAATAATTAAATGATCCCTATTCAAAAGAACCCTGGCTTGGGTGGAGGATCCACTCTGGCTAA 4423
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4424 CGGATAAGAGTGATGAACTTCTTTGTTACCTGACCCTTCTCTTCTGGAAAAGTGAGGTGTACATTAAACATCTT 4497
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4498 TTGGTCACCGTGCCTCACTAAGACCTTTCACATTCCAGCTTGTCCGACTAGTGTAATGTACCTCTCACTTCTGT 4571
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4572 TTTACGTTGAGCATTACGAATTAAAATCTTTACAGTCTAGGGGGAAAAAAAGGCTTCAATACCAGTTGGCTTAT 4645
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4646 GAGGCTCTGCATATAATTTTCTCTAAAATATGTAACTATTTTGTAGTCTGTGGGGACTTTCAAAGCCAATTTTT 4719
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4720 AAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTGAATGAAAAATCAGAAATTCTAATCTTTGCTATAAAGTAC 4793
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4794 TTAAACACAATACATTGCCTCAGCATAAATAAAAACATTTTTATTAAGATGATTTATGAACATGGATTTCTAAC 4867
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4868 TGGACCAACACTAATGTTGCAACCTGATAAAATTTGAGATGTAAATTCATTTCACAGACTCATAAACACACTCT 4941
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4942 CTTTAAGACTCTTCTTTAAATGGATCCTTACATTACCCTGCCTGTTTTATTATGCCTTCATTTTTGTGGTTTTC 5015
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5016 ATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTACATTTCCCAGAAACTCAGTGAATATCTTGCCTTTTCTTC 5089
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5090 AAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTGAAACTAGCTCTATGTCTATCTAAAAATCAAGTCTCGGCA 5163
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5164 GTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGAGGGCAGATCATCTGAGGTCAGGAGTTTGAGAC 5237
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5238 CAGCCTGGCCAGCATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGCGCACC 5311
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5312 TGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGCAGGAAGAGGTTGCATTGAGCTG 5385
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5386 AGATCACGCCATTACACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAATCATTCAAGTTTCAC 5459
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5460 TGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCATCAGCTAATAGATCTGAAAGTGATGCCGGTGTCTCTAGGA 5533
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5534 AAGGAATTGATCATAGCCAAGTGACTGACATTCTCTCGGTCAGGAAAAGAGCTTGCTTCACAGCCTTTGAAGTA 5607
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5608 TGACTGTATGTGTGGTCCCCTTGTACTTTGGAGACAGAAGGTACTGGCAGCGAGTGTGGTGGATGGGCAGAAGG 5681
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5682 TGTAGCATTCGGAGATTATTTCTGTATGTAATTAAGAGACTTTCAAGGGTTAGCCAGACTTTTTTCCACTCAAG 5755
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5756 TGTGGATTATCTTTGCTACCTGTGTTAAAGAATATCAGGTTTTGTTTCTTATTGTGATTTTTGAGTCTAAATGA 5829
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5830 TCCAAGATTTTTAAAATAGATACATAATGAAATCCAGGCCTCTGAAAAATTATGGCAACATTCATTTGGAGTGT 5903
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5904 GGCTAAAAACTCATACTTTATCCAATTTGGTTGCCTCTCTCAGTTACTGCAGTTTATAGAATAATTGAGCTTGA 5977
Query 259 ---------------------------------------------------------------------- 258
Sbjct 5978 ACCATGTGAATGCTCAGAATGTCAATGGTGGAGTATTTATTCAAGAGAAATGGCTGAATCTCGATACGAA 6047
