Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13766
- Subject:
- NR_136158.2
- Aligned Length:
- 4744
- Identities:
- 219
- Gaps:
- 4505
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGTCCCCTTGGGTCCTTGATCCTGAGCTGACCGGGTAGCCATGGCCTTGCGGCTCCTGAAGCTGGCAGCGACG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGCGTCCGCCCGGGTCGTGGCGGCGGGCGCCCAGCGCGTGAGAGGAATTCATAGCAGTGTGCAGTGCAAACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGCTATGGAATGTGGCATTTCCTACTTGGGGATAAAGCAAGCAAAAGACTGACAGAACGCAGCAGAGTGATAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGTAGATGGCAATATATGTACTGGAAAAGGCAAACTTGCAAAAGAAATAGCAGAGAAACTAGGCTTCAAGCAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTCCTGAAGCGGGGATTCATTATCCAGACAGTACCACAGGAGATGGGAAGCCCCTCGCCACCGACTATAATGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAACTGTAGTTTGGAGAAATTTTACGATGATCCGAGAAGCAATGATGGCAACAGTTACCGCCTGCAGTCCTGGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGTACAGCAGTCGCCTGCTGCAGTACTCAGATGCCTTGGAGCACTTGCTGACCACAGGACAAGGTGTTGTGTTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGCGCTCCATCTTCAGTGACTTTGTGTTCCTGGAGGCGATGTACAACCAGGGATTCATCCGAAAGCAGTGTGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGACCACTACAACGAGGTGAAGAGCGTCACCATCTGCGATTACCTGCCCCCCCACCTGGTGATTTACATCGATG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCCCGTTCCAGAGGTCCAGAGGCGGATTCAGAAGAAAGGAGATGTAATGCAGTTTTCAATCAAAGGCCAAGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTCTATTTTGAATGTAGATCAGCACTAAAAGCCCTGTTTTAATAGCATTTATACTAATTCCTACCAGTCCTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGAGGAGGGTGACACACACCCTGTTCCCACTTGAGAGAGGGCATCTGCAGGGGTGGAGGGGAGACCCCATGGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGGCCTGGTGCCACAGCCTGCGGGCCTGCCGCCCACCAGTGCTCTGCGGTCCCACTGTGGTCCCCGAGTCCCCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGCTGTTTAAACTTGGGAGGCTGGTGAGGGCCTCCTGGCAGAGCGTCCTCCATCCCTCTGTCACGTACCTTTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGTTCTCTGATGAGGTTTTTGTGTCCTATCGTTTTCTTCCACATTGGAAGCAATTTCTAATATCCCTCATCACT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCAATCTATTTAACGCAAATCGTGCCTCTCCCCCTTTTTCTTACTTACCAATTCTAGAACAGTAGAGCAGTGAT 1184
Query 1 ----------------------------------------------ATGGGGGGC------------------G 10
.|.||.||| |
Sbjct 1185 ATCCACACACATCCATTTACTCTTTGTAGTTTTCATTGGATCTTAATTAGGTGGCCTCGAAGCAACGCCTTTTG 1258
Query 11 GAGTGA--------------------------GCGG--TGAACACACTGAACAGAAT-CTGAGATTTAATAA-- 53
.||||| |||| ||| || .||.|| |||||||..||.||
Sbjct 1259 AAGTGACCCTGTGGCCGTTGGTAGCTCTGTTGGCGGCTTGA------TG--GAGGATCCTGAGATGAAACAAAG 1324
Query 54 ---------GCCAAATCAACAATGTGGGAAGTTCGTTTTGTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCA 118
||| .|||||..||||| |||||||||||||||||||||.||||||||||||||||
Sbjct 1325 ACCGTCTTTGCC---------CTGTGGCGAGTTC--TTTGTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCA 1387
Query 119 CCCAGGCTGCAGTGCAATGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCTCAGGTTCACGCCATTCTCCTGC 192
|||||||||.||||||.||||||||||||||||||||||||||||||||||.|.||||||||||||||||||||
Sbjct 1388 CCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGC 1461
Query 193 CTCAGCCTTCCCAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCGGCTAA-TTTTTTGTATTTT------- 258
||||||||.||.|||||||||||||||||||||.||||||||||||||||||| |||||||||||||
Sbjct 1462 CTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCACGCCACCATGCCCGGCTAATTTTTTTGTATTTTTAGTAGA 1535
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1536 GACGGGGTTTCACTGCTTGTTTAATACTATGTTATTTTTTCCTGGAGGAGAATATGGTCTCCTTTTTGATACTG 1609
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1610 TGATGAAAATGCAGGGCTACCTGCCTGTTCCTCACTCTGATGCCCATCCTCAGTGCCGGAATTCTTGTAGGTGC 1683
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1684 TCAGGAAATACCTCTCTGGATGGTGGGTTCTTGTCAGGGCAACAGTAAAGCTCTGGTTATTTTTTGCTGCTCCT 1757
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1758 GAAAGATCCATGGGACTAACTTTCCTTCTCTGTTGCAATAGTAGAAACAGCGAGATGTCTATGTATGCCTTTCT 1831
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1832 ATTGCCACTCTGGAACTTTTATTGTTTAAGCATATGCTTGTAAGTATGTTGTATAGCTAGACTTCTAAGAACCT 1905
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1906 TCCATCAAGTGGCAAAAGGAGGGAACTGCAAGTTCAAAATGTTTGTTTCTCAGTGGACTAACTGGACACCTTTG 1979
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1980 CTTATTATGCTGACATTTATTGAGAAAAACAAAGTCATACATTTAACATTCTCTAGATAATTCTTTTGTTATCT 2053
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2054 GGGAAAACAGTATTTCAAAAATAATTCTGAGGTCTAAAGTAGAGCTGTCAACTTCTTAATTTTTCCAAGTAAAG 2127
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2128 TCTTCAATACTGTCATCAGGTAAAATTACCCCATTTTATAAAAGACATCACATTATCAGTAAGTCTGTGTTCTT 2201
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2202 ATTTTGATTTTTATTTCAATGCAGTCTGTGTCTCAGTATTGCACCTTTTGGGAATAACTGATAGGAATATCCGA 2275
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2276 AAACCATTTCTAGATTCTAAGAAAACAGTCAAAGTGATCAATAACTACATATTTTATCAAGTAACTTCAGGTCA 2349
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2350 GATTTCTGAGATGGTTGTGTTATGTTGCATGTTATGGGCTTATATTACACTAGAGTTTCTTTTATAATCAGTTA 2423
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2424 ACATTTAATCTTATTCTACTTGGCACATAGCTAATGATAGAGATTTAGAATCATATCACCTCTTTTATACTTTT 2497
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2498 GTTGATTTCACTCACTCCTCTAATACAGAGCACCTCCTATATGCAAGGCGCCTGTGCCAGGCACCTAGGAGGCT 2571
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2572 GCAAAGATGAACAAAGATGGTCTCTGCCCAGACACCAAGTCCTTATTGGAAAATAGAACTCCCAATTACTGCCT 2645
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2646 TTCCCCCTTTTGACAGAGCAATGAAGTGCAGCATTGCCTGTATCATCCTTTCCCTGTGCCCCGTCGCATTACTG 2719
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2720 GAATTAATACATGTTCAGTAAATATTCTTTGAATGATAGGGTTTTTCTTATTTTGAACAGCTTTAATGAGGTAT 2793
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2794 AATTTATGCTCCATAAAATTCACCCATTTTAAGGGTACGACTGAATGATTTTGGGTAAATTTACCAAGTTGTTG 2867
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2868 CCACTCTTGCCATAATCCAGTTTTAGAATGTTTTCATCATTTTGTAGGTTGAAACCGCAGGCCTATTCATTTCT 2941
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2942 TTCTTCCTTCCTCTCTCTCCTGTAAGTGTTGATTGAGCATCCACCCTGTCCTAGACCCTGCTTGGTGCTAGGGA 3015
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3016 CATACCAGTGAGCAGGGTGGATGAGGTCCTCACCCGTGAGCTCATATGCTGATGGGGGAGACCTACAGCAAGCA 3089
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3090 AGGAGATAAATAAATACATCAAATAGAGGTAAATGATGTGAAGAAAACAAAACGGGCTGAGAAGATAGTGTGAG 3163
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3164 ACTGTAAGGAGTTTTAAATTTTAAAACTTGCTACTCATAATTAGATATTCAAGTTTCTGAAATTCGCATAGTGC 3237
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3238 ATTTCAGATGATGAGAGAGGTGACAGCCGTAGAAAGTGGGAGAAGTGGTTGCGGGGAGATGGGTGAGCGATGGA 3311
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3312 GGTGGCGAGCAAGTTGGAGAGATGCAGGGAGAGTCAGGTGACAAGAAGAGAGTGTGCTGAGGACAGATGGCGGA 3385
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3386 CAGACAGGCCGCTGCCCCCAATTTTTGGTGCTCTTTCATTCCTGCACTCAGGCACGAGGCAGACAGGAAAGACA 3459
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3460 GGCAGTGCTGCTTCGTAACAGGCATCTTTCTTGCCCTAAGTATACATCTTAGAATGTGTGGAGAAAGTCACGCT 3533
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3534 ATGGGAGCACTTGGGCAGGCTCAGGTGTTCACTGTAGTAGAAGGAGAATGACTCTAGCTGATGTTGGGACCCTT 3607
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3608 TGCTGTCACCCCGCAGTCCCCACAGTGCCCGGTGTGAGTTGTAAGAAAATGGTGGTCAGTGATTGTCTTCGCAT 3681
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3682 TTTATATACGCACAGGTCAAAGAGAATGAACTCTAAATGTTTCCCAGTTTGATTTTTCTGCTTCTGTTTAGCCA 3755
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3756 CATGAAATGAAGATCACCTCTGCCTATCTACAGGACATTGAGAATGCCTATAAGAAAACCTTTCTCCCTGAGAT 3829
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3830 GAGTGAAAAATGTGAGGTTTTACAATATTCTGCAAGGGAAGCTCAAGATTCAAAAAAGGTGGTAGAGGACATTG 3903
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3904 AATACCTGAAGTTCGATAAAGGGCCGTGGCTCAAGCAGGACAATCGCACTTTATACCACCTGCGATTACTAAGG 3977
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3978 AAAGGAGCTGGAGGAGAATACGCATGTTGACTCGGGCAGCTGGGAACAGCTTGGCTGGCTGGACCAAGGCTTGG 4051
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4052 AAAGACTCGGGAATCGGAAGATCAGGGACAAGGAGGTCTGGAGTTGAGGCAGCACGTGGACCCGATGGAGTGAC 4125
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4126 CTGAATGTGAAGATCTATGGATGGACATTGACACCCAGGGTCTGGCCAGCACCACCAAGTAGGAGCTGACCCAG 4199
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4200 CGTTGGCAGGGGCGGCAGGAGGATGACTATCAGCTACAGCCTGGAGGCCAGCTGCAGCTCGGCCCCACGAATCC 4273
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4274 GCTTCCCACCCTTCCTCTCCCAAGCGTTCTGCCCAGGATGGGAGCCTAGCCAGAATCCTGGAGGAGATGTTCCC 4347
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4348 AGGTCCCAGCAGACCAGGAGCACAGATGGGTCAGCCTACTCAGTTCTCCACTGGGCTCCCTGTTCTCAGAATGG 4421
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4422 TCTGTGTGTGGAGAAGACTCCTAAGTGCCTGGGAATAGGTGGGCTGTGGGTGAAGCGGATGAAGGCGATACAGA 4495
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4496 GCGAGGACGTGGCCTGAAACCGAGAGCAGCATTCTCCCTTCCCTGCTTCCATCCGTTCCTGGTCTGCGTCCCAG 4569
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4570 CCCTGGTACGTAAGGCTGTCCCAGAATCCCTGTAAATTCACTTTTCTGTTAAATGATTCCAGATCATTCGGTTA 4643
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4644 TGTGCAACCAAAAGTCCTCACCCATACGTCATCTTACAGCATTAAAGCTTCAGGCGACTTGGGTATGTTTTAAA 4717
Query 259 -------- 258
Sbjct 4718 AACAAAAA 4725
