Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13766
- Subject:
- XR_001749867.2
- Aligned Length:
- 5132
- Identities:
- 126
- Gaps:
- 4993
Alignment
Query 1 ATGGGGGGCGGAGTGAGCGGTGAACACACTGAACAGAATCTGAGATTTAATAAGCCAAATCAACAATGTGGGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTTCGTTTTGTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGCAGTGCAATGGCACGATCTCG 148
||||||.|||||||||.||||||.|||..||||||||
Sbjct 1 -------------------------------------TCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCG 37
Query 149 GCTCACTGCAAGCTCCGCCTCTCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCCCAGTAGCTGGGACTACAGG 222
|||||||||||||||||||||...||||||||||||||||||||||||||||.|..||||||||||||||||||
Sbjct 38 GCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGG 111
Query 223 CGCCCGCCACCATGCCCGGCTAATTTTTTGTATTTT-------------------------------------- 258
|.||| ||||.||||||||||||||||||
Sbjct 112 CACCC--------GCCCCGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGT 177
Query 259 -------------------------------------------------------------------------- 258
Sbjct 178 CTCGATCACCTGACCTCGTGATCCGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCG 251
Query 259 -------------------------------------------------------------------------- 258
Sbjct 252 CCCAGCCCTTTTCATGTTCTTTGACTGTTTTTCTATTGACTGTTCATTCTTCCTAGTATTAATAACTTTTTGTA 325
Query 259 -------------------------------------------------------------------------- 258
Sbjct 326 TATTTGAGATTAACCATTTTTGCCTATTATGTATTTTATATATATGTCATATGTCATTTTAAATATAATGAAAT 399
Query 259 -------------------------------------------------------------------------- 258
Sbjct 400 GTATTAGTCTTTGTGGTTTCTAGTTTTCATGATATGTTTTGAAAGGCTTAATTGTTTTGTTACAAAGTCTGAAC 473
Query 259 -------------------------------------------------------------------------- 258
Sbjct 474 TTGAGTTATGAATGCAAATTTCCCCTCTCAAATGCCTAATCTGTTTCCCAAACACCATTTACTTATCCCTTAAG 547
Query 259 -------------------------------------------------------------------------- 258
Sbjct 548 GGATTTACTTTTCCCTATTTGATCTATTTCCCACCAATTTTAAAATGTCATCTTTATCATATACTAACTTCCTG 621
Query 259 -------------------------------------------------------------------------- 258
Sbjct 622 TATGTTCTTGCGTGTATATGAAACTGGCACATACAGGGAGACTCTTTATTTAACTTTTACTTAAAGTAGGAGGT 695
Query 259 -------------------------------------------------------------------------- 258
Sbjct 696 AGGAAAGAGATCTGTTGAAACCATGACAGAGAGTGTTGCAGCGCCTGTCAAAGTTATCCTTGCTTATTTGTAGA 769
Query 259 -------------------------------------------------------------------------- 258
Sbjct 770 AAAATTGAACTTTCCATTTTCCTAACTTTCAACTTGCAATTGAATGACACTGATTCTACTAGGAAAAAAGTAAA 843
Query 259 -------------------------------------------------------------------------- 258
Sbjct 844 AGCTATACTATTTGATGCCAGATGTATGACTGTGGGCTGATGAGGAAGAACTGGAAACAAATGACAGGTGATTC 917
Query 259 -------------------------------------------------------------------------- 258
Sbjct 918 ACTGCTTTGTGTCTGGTGTGCCATGACTCTCTTGAAGGGGGGCAGTGTTGATCTGAATCTTTTTGTCTAATGCT 991
Query 259 -------------------------------------------------------------------------- 258
Sbjct 992 TTTTCTTCCTCTGGGAGGGATGCTGAAGAGGGGCAGCTGAAGGAGCAGTCTTAAGCAAATTGGTCATGGCTTTC 1065
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1066 TTAAATATTGTGATTCGATTGATATGGAACATTTTTTCAGTCTGTGAGAGACTTTTCATTATGGACTAGCTCAT 1139
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1140 AAAAAACCGTAGATTTAATTTGCCCAGGCTGTTGGTTCTCTTGTGTTTGTTATCATACGTCAGCATGAAACCTT 1213
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1214 TGGCCTTTGTGGAAGCCTTGTGGAGACCACTGAACAGACTTGGAGCCATATCTGACTCGCCTGCCAGCATTCCT 1287
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1288 GATGTTCAGTGCCTGTTATTGCCCCTCTCCATGGCATTCTCCTCTGTGGTTATGTGAAAGGAAAATAAATCACT 1361
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1362 AAGCCAAGGGAAAAATCAAACTGGGAGCTATGTCAGGCAAACCTGCCTCCCATTTTATTCCTAAATAACATAGC 1435
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1436 TACATACCTCCCTCGCAATTTGCCACAGATCCTCGTCCACAAGGAAATTCACTGTGGACAAAGGACAGACAGAA 1509
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1510 CTCAAAGTCATCCCTCTGAGACTCACCTGAGACAAATGCATATCTGATTGCTTCCTTTGCCCTATTGTTTATGT 1583
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1584 AAAAATGCAGATTCACTGAGTCAGACTAAGTTGTGTATTGAGTGGAAGGCTCATCAGGACTCAAAAGAATGCAC 1657
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1658 CCTAATGTCTTTTATCTACTTCTAACCTGGAAGCCCCCACATTGAGTTGTCCCGCCTTACCTGGCCAAACCAAT 1731
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1732 GTACATCTTACACATGTTGACTAATGTCTCATGTCTCCCTAAAATGTATAAAAGCAAGCTGTACCCCAGCCACC 1805
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1806 TTGGGCACATGTCGTCAGGGCCCCCTGAGGCTGTGTCACGGGTGCCTCCTTAATCTTGGCCAAAAAGACAAAAG 1879
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1880 AAAAACTTACTAAATTGACTGAGACCCGTCTCAGATACTTTGGGTTAACAGTTAGGTTCTACCCTTTGATGCCT 1953
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1954 GTTTACTTGACTGTGTACTGAGACCAGTTGCTTCACTGAACATTAATACCACAACAGGCAACGATTTTGTTTTG 2027
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2028 TGGTAGGGTACTTGGCCTAGTGCCCATTTTGTAGATGTGTCATTGCTGAGAAGGCAGAACAGTAAGGGGATTTA 2101
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2102 AAAAATTTATACACTGTTATACATTGTCACTGAAATGCCAAATGATTTAGCTTTTGTTATTGTCACTCAGCCTG 2175
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2176 CTTACTTGAGCAGGGTTTGGCAAGCCAGTAATTTAGGGGACTTGTGAGTGAAATACCATGTGAATAAAGTCCAT 2249
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2250 TGTTTCCTTAGTTAGAAAAAGGCTAATTGACTTACATGCTGTTTCTGAGGTGAGGAAGTTCCATTAACAAAACG 2323
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2324 AAACCAAGCCAAAGAATCCAGTGTTTCTCAATTTAACCTAGTCAAATATCTGACATCTCTTTGAGAAATGGATA 2397
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2398 CCCAGTGTCAATAATCCTATGAGGTTAATGGCAGTTAAACAATGGTTTGCTTAAACAGTAACTGGCAAATGCTA 2471
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2472 TAGGGCAAAGCCTATTTGTGGTGTAGGGGGTGCTTGCATCAGTTGATCGGCTATGCTGTATTCACTTGCTTTCT 2545
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2546 GAAATATCTGTGGCAGGGACAAAAGTTCCTATTTGGTGCTCACTTTGGACTTTTATTTTTGTTTCCTTTGCAGT 2619
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2620 TGCAAAGATCTTTTCTGTAGCCTCAGCTGATCTAATGCAGTGGTTCTCAGATTTCAGTGTACATAAATCTTTTG 2693
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2694 GATGCCTGTTAAGCATACAGATTCCTAGGCCCATACCCAGCTATTCTAATTCAGCTGGCCTGGCAACAGGCATG 2767
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2768 TTTAATAAATTTCTTAGGTGATTCTAATGCATGTGTTCCTTTGAAAAAAAATTGGATTGGGTCAGGATGTAGGA 2841
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2842 GAAAAGGAATTGATACCGTTTTATGCATGTGTTATGTACTAGATCTGGTTATGGCAGGATGCCTCATTTCAGTG 2915
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2916 GTTCCCTTCTAAACCCCAAATACCATGTCCACCTGTTCGAGACATAATATCCCTATGTTTGTGAGAACCTGTGC 2989
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2990 TTAGGGAATGATTCCTTCAGTTTGAAGCTTCTTATTGTCCTTTAAAATGCAGATATGCAGGAGGAGATATCTTT 3063
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3064 TTATGGCTTAGCAGAATGCTGCTCAAAGCGCCAGTCTCTGAAGCTCTTTGTTCCTGACTTGCAACCAGGTACTT 3137
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3138 TAGATTTTCTACATCTAATGGTGGCAAATAAATCCACTAGCTGCCAAATACATGGGAAATGATCTGTGAAAACC 3211
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3212 ACAAGTGGCCCAACAAACTGTACGTCTTCAATTTGACAGCACAAAGGAATTATTGAACAGAAGCTGAAAAAGCA 3285
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3286 TACTGCTTGCATTTCAGGTGTTCTGGGACTCAGTGTTAGAAGCTGTCTGTCTGTAAGAATCTTGCTGTCTCTGC 3359
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3360 CTCATGAAAACAATTGCAGTGATGAGAACCAGTTACTAATGGCATACATCACACATTTCAGCCCATCTTCTGGG 3433
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3434 TGAGCAGGTGGTTGAGCTGTCCCTCGCCTTTGAATCAGGAAGTTAGCATCAAAAATGGTATGTTGCTTTTCCTT 3507
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3508 CCTTTTATTTTATTCAGTCTTGGCATGGTGTGTCACCTAATTAACAAAACAAATGTAATTTTATGTGACTTTAC 3581
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3582 CTCTTTTCATGGCTCATTATTTTCCTCCAATGTAAGAAATTGATGTTCACATCATTTCTTATCCTCCCTCCATC 3655
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3656 TAAAAGGAAATGTCCAATTTGGAAGACATTTTCTTTAGTCTTCTATGAAAGCCCTCTCATGACCTTTCTGCTTG 3729
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3730 CAAACAAAAGAATCATTTCCTGATCAGCACCAGCAGTCAGCTCCTTTACAATGGAACCCATTTAAGGTCAGTGC 3803
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3804 TGGCCTATAATAGAACTACTTAAATAAGTGTAACTTCAAAGAAAAATGGAAATAATGTGTAATATTGAGATGTG 3877
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3878 ATAACATCTTAGAGAAAATAGTTCGTTTTTCTGCTATTTTTAAAGTAGTAGCCAATGGTGTGAAGCGGTTTCTA 3951
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3952 AAGAAAGCTCACACCACATCCCACCACCAGAAAGCTCCTCCACAACGTGGGCTGGATCCAATTCAGTTCCCAAT 4025
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4026 ATGGCGTTTCAGGAGAGATTGTCATGGATTAGAGGAAGGTATTCAAGATGATAAAGGGCCTAGAAAAAATATCT 4099
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4100 TGTTGGGAGTGTTTAAAAAAAAAAACTTTAGACAAATTAAATTGAACAGATTTTAACTGAGTGAAGAACGATTT 4173
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4174 GTAAATTGAGTAGCTACCCCCCACCTCCCAACCCGAATAGGTTCGGAGTTACTCAGGCATTGCCAGGAGTTCAA 4247
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4248 AAGGATATACGCACAGATAAAGGAAAATGATGTACAGAAAATCGAAGTGAGGTACAGAAAACGGAAGTGAGGTA 4321
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4322 CAGAAGACGGAAGTGAGGTACAGAAAACGGAAGTGAGGTACGGAAACTGCTGGGTTGCTTACAGCTCGCGTTTG 4395
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4396 CCTTCTTAGCACGGTTTGAGAGGTTGGCTGCCTGTGAGTGGTCAAAGTCTGGCTGCTGGGATTAGCTGAGACTT 4469
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4470 AGCTACTTGTTCCAAGAGCAGGTTCCGGTCTGTTTCCACATCCAGTCAGGTTTCAGTTCACTATGTACCCAGAA 4543
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4544 ACCTTGAGGCTGAACTTAAAATATGCGAGGAAGCAGCTTTAGGTGAAACAACGTAGCAGGAGTATAGCAAAAGT 4617
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4618 TCAGTCTGATATAAAGGAGATAGGACAGACGGATGCCTGTGGCCATTGTCCATCTTTGAGAGGGTATTTAAAGG 4691
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4692 CTGGCTTGTTCTGTTTTGCTTCTGAGACATACTAAGTACCGATCGGTAGAAAGTGAAAGCAAATGATGGCAAGG 4765
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4766 ACACCTCATAAATTAGTGAGTCACTCCCCATCATTTGAGAGTATTAAGCAAGAGGGTCAACGATTATTTGTAGG 4839
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4840 ACTATTTTAGTCCTACAAATTTTAAAGGCATTTCCTGTGCTGGGTGGATTTTTATGATTCTTATATGAGCATGC 4913
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4914 TCCGTTTTTCATGATGCTAAAGAGGAAATACTTGCTTTGTTAATTTAAAATGGATTAATTTAAACAATTCTTGG 4987
Query 259 -------------------------- 258
Sbjct 4988 CTGGGCGCAGTGGCTTACGCCTGTAA 5013
