Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13766
Subject:
XR_001751322.2
Aligned Length:
5396
Identities:
152
Gaps:
5224

Alignment

Query    1  ATGGGGGGCGGAGTGAGCGGTGAACACACTGAACAGAATCTGAGATTTAATAAGCCAAATCAACAATGTGGGAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GTTCGTTTTGTTTTTTT-TTTTTGAGACGGAGTCTCGCTC-TGTCACCCAGGCTGCAGTGCAATGGCACGATCT  146
                      ||||||| |||||||.|||||.|.|||||| ||...|||||||||.||||||||||..||||||
Sbjct    1  ----------TTTTTTTCTTTTTGATACGGAATTTCGCTCTTGCTGCCCAGGCTGGAGTGCAATGGTGCGATCT  64

Query  147  CGGCTCACTGCAAGCTCCGCCTCTCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCCCAGTAGCTGGGACTACA  220
            |||.||||||.||.|||||||||.||||||||.||.|||||||||||||||.||.||.||||||| ||||||||
Sbjct   65  CGGTTCACTGTAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGGCTCCCAAGTAGCT-GGACTACA  137

Query  221  GGCGCCCGCCACCATGCCCGGCTAATTTTTTGTATTTT------------------------------------  258
            |||.||||||||||.|||||||||| ||||||||||||                                    
Sbjct  138  GGCACCCGCCACCACGCCCGGCTAA-TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATATTGGTCAGGCTG  210

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  211  GTCTCGAGCTCCTGACCTCAGGTGATTCGACCACCTGACCTCCCAAAGTGCTGGGATTACAGGCGTGTGGCACT  284

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  285  GCACCCTGACACAAATTTAACTTTTTAAAGGTCAGTTAACTCAGCACAAGAAGGCTACTTGATGACCTTAATAA  358

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  359  AGTACTTTTTAGTTAAATGCTAAGGGCCAGGTTAAAATGGATTAAAGAATGAGACCCAAAGGAACTGAATTAAC  432

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  433  AGCATATTTAACTTTCAGTAAGTTCTAATTCTTATCTACACCTAGGCCTTACCCTAGGCAATTCTCACCACACA  506

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  507  TCCTGGTAGTTGGGTCGATTACATTTATTATGTTGTCTTTTTTGTAGAGACGGGGTCTCGCTATGTTGACCAGT  580

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  581  CTAATGGACTGCTCTGAGACGTTTGGCCTGAGGTGATCCTTCCAGGCAGGAGGATCACTTCAGGCCAGGAGACT  654

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  655  GGGAACCAGCCCAGTAGACTGGGCAACATAGCGAGACCCCAAGTTTAGTAAATGTGGGTGGCAGTGGACTCAAA  728

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  729  TTGTAGAATTGGCACAGGTAAAAGCAATTATTCGCTTTTCAGAGGCACACTGTGTGGATGTGAGAACAGGCTGG  802

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  803  CATTTCCGATAACAGGTCTGCGTGTTCCCAAGTCCTTGTATCCCACAACCTTCACGTAGACATCTTATCTAACT  876

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  877  ATGCTGTCCTACCCAACCTATAGCGTTCTTGCTCCCAGAGTCTAAATGGGAGCCCCAAACTAATTACTGTATAG  950

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  951  TAGTCGAACTACACACCAGGCACTTCCCCGACAATCTACAACCCCATCCAAAGGGGTCAGAAACTAGTAACAAA  1024

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1025  ATACCAGCTGCGAGCCTCTCCTTCCCCTAAAGAGATCTTATCAACTTGGCTGCACCTTCCCACCTCTAGCCTGC  1098

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1099  GGGAACAAATATCCCAGGATCCCGGGCGGTTTCGATTGACGTTACTTCCGGGAAAAGTAACCTTGCATCGGCGG  1172

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1173  TTGCGGGCCTGGAAAGCTCTCGCGACATTTTCTCCTGCGAGATCTGCTTGCTCACTGTAGCGATGACATCCTCC  1246

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1247  TCCTCCTCCCCGCCGCCTTTCGGCAATCTTCGCCAGTCCCAGTCCCGACTAATCTGTACTCAGATGGCATGGAT  1320

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1321  CAGGGTCTCCCCTCGAACCCCGGTTCGCACGGGGCGTCAGGTGGCAGCGGCGGGGTGCGAGCTGCGCGAGGCCG  1394

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1395  ACGGCAGCGGCACTACGGGTGGCCACGGGCAGGCGACGAGCAGTGAGTGTGGGCGGGGTGGGGGTAAGCCACCC  1468

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1469  GTGTAGCGGCTCGATTGTTCTGGCCTGGCTATGGCGCCTCTCCTCCCCCCCGCCATGGCTCCCCGTGTCCCTGC  1542

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1543  TCCGCTCCTCTCAGTGAGTGAAAGTGGCCGCCGCCGCCGCCGGCCCAGCGCCCGCAGCCGCCTCAGCGCCGCCG  1616

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1617  CCATCTTGGGGTCCCAGGAGCCGCGGAGGGAGCGAGCTAGGAGCGTCCACGCCCAACGCAGTCACCGTCCCACG  1690

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1691  GCCTCAGAGAGCGAACCGCGGCTCCACCGTCGGCGGGGCGACCCCCCCCTCCGGACCCCGCCCGCACCCCGCCC  1764

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1765  CCCCTCCGCCGCCGTCGCGGCGGCGGGGCCAGGCGGCCCGAGCCGTGCAGTCGGAGGTCCTTGTGCATGAAGAC  1838

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1839  AGATTTGTTCTATGGCCTCGGAGTTGGGTGCCAGGGATGATGGAGGCTGCACTGAGCTGGCAAAGCCCCTCTAT  1912

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1913  CTTCAGTACTTGGAGAGGGCCCTCCGGTTGGACCATTTTCTGCGACAAACGTCAGCTATCTTCAATAGGAATAT  1986

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1987  TTCTAGTGATGACAGTGAAGATGGACTGGATGACAGTAATCCATTATTGCCCCAGTCTGGGGATCCCTTAATAC  2060

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2061  AAGTTAAGGAAGAACCTCCAAATTCATTGCTTGGTGAAACTTCTGGAGCAGGCAGTTCTGGAATGTTAAACACA  2134

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2135  TATTCTCTGAATGGAGTTCTACAGTCAGAATCAAAATGTGATAAGGGGAATTTATATAATTTCTCTAAGCTGAA  2208

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2209  GAAAAGCAGAAAGTGGCTAAAGAGCATTCTGCTAAGTGATGAATCCAGCGAGGCTGATTCTCAGAGTGAAGACG  2282

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2283  ATGATGAAGAAGAACTCAATCTCAGCAGAGAAGAACTTCACAACATGCTTCGACTACACAAATATAAGAAACTT  2356

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2357  CACCAAAATAAGTATAGTAAAGACAAGGAGTTGCAGCAATATCAGTACTACAGTGCAGGCCTGCTCTCCACATA  2430

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2431  TGACCCTTTCTATGAGCAACAACGGCACCTACTTGGACCCAAGAAAAAGAAATTTAAGGAGGAAAAGAAACTTA  2504

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2505  AAGCTAAGTTGAAAAAAGTGAAGAAAAAAAGACGAAGAGATGAAGAACTTTCCTCTGAAGAATCCCCTCGTCGC  2578

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2579  CATCACCACCAGACCAAAGTCTTTGCCAAGTTTTCTCACGATGCACCTCCCCCTGGCACTAAGAAAAAGCACTT  2652

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2653  ATCCATTGAGCAGCTGAATGCTCGTCGCAGGAAAGTATGGCTCAGCATTGTGAAAAAGGAACTACCAAAGGCAA  2726

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2727  ATAAGCAGAAAGCTTCAGCTCGTAACCTGTTTCTCACCAATAGCCGAAAGCTTGCTCACCAGTGCATGAAGGAG  2800

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2801  GTGCGTCGAGCTGCCTTGCAGGCCCAGAAGAACTGTAAGGAAACCTTGCCTCGTGCCCGCCGCCTCACCAAGGA  2874

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2875  GATGCTTCTGTACTGGAAGAAATATGAGAAAGTAGAGAAGGAGCACCGCAAGAGAGCAGAGAAGGAAGCTTTGG  2948

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2949  AGCAGCGGAAGTTGGATGAGGAAATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAACTTCTTAATTACCCAG  3022

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3023  ACAGAGTTGTATGCCCATTTCATGAGTCGCAAACGAGATATGGGTCATGATGGTATCCAGGAAGAAATCCTAAG  3096

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3097  GAAACTGGAAGACAGTTCTACCCAGAGACAAATCGATATAGGTGGAGGAGTGGTAGTTAACATCACACAGGAGG  3170

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3171  ATTATGATAGTAACCATTTTAAAGCCCAGGCCCTGAAGAATGCTGAAAATGCTTACCATATTCACCAAGCTCGG  3244

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3245  ACAAGGTCATTTGATGAAGATGCAAAAGAAAGTCGAGCAGCTGCCCTACGGGCAGCAAACAAGTCTGGCACTGG  3318

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3319  GTTTGGGGAGAGTTATAGCCTGGCTAACCCATCTATCCGGGCTGGTGAGGATATTCCACAGCCCACAATTTTTA  3392

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3393  ATGGCAAATTGAAAGGTTATCAACTGAAAGGCATGAATTGGTTGGCCAATCTATATGAACAGGGTATTAATGGC  3466

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3467  ATTCTTGCTGATGAAATGGGCCTTGGTAAAACAGTACAGAGCATTGCCCTTCTGGCCCATCTGGCTGAGAGAGA  3540

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3541  GAACATTTGGGGACCTTTCTTAATAATTTCACCTGCGTCTACACTTAACAATTGGCACCAGGAGTTTACTAGAT  3614

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3615  TTGTTCCTAAATTTAAGGTGCTACCATATTGGGGAAATCCTCATGATAGAAAAGTCATCAGAAGGTTCTGGAGT  3688

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3689  CAGAAGACCCTCTACACTCAGGATGCCCCCTTCCATGTGGTTATTACCAGCTATCAGCTGGTGGTGCAGGATGT  3762

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3763  AAAGTATTTCCAGCGGGTCAAGTGGCAATACATGGTACTGGATGAGGCTCAGGCGCTCAAGAGTAGTTCCAGTG  3836

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3837  TTCGTTGGAAGATCCTCTTACAGTTCCAGTGTCGGAATCGGCTTTTGCTAACCGGGACCCCAATTCAGAACACC  3910

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3911  ATGGCAGAGCTTTGGGCTCTGCTGCATTTCATTATGCCAACATTATTTGATTCACATGAGGAATTTAATGAATG  3984

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 3985  GTTTTCCAAGGACATTGAGAGCCATGCCGAAAACAAATCTGCTATTGATGAGAATCAACTTTCTCGCTTACACA  4058

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4059  TGATTTTGAAGCCATTTATGCTGAGGAGAATCAAGAAAGATGTGGAAAATGAATTATCTGACAAGATTGAGATT  4132

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4133  CTAATGTATTGCCAACTGACCAGCCGACAGAAGCTGCTATATCAGGCACTAAAGAACAAAATTTCCATTGAGGA  4206

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4207  TTTATTGCAGTCTTCTATGGGCTCTACCCAACAAGCACAGAACACCACCAGCAGCCTCATGAATCTGGTCATGC  4280

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4281  AGTTTAGGAAGGTGTGTAATCACCCGGAGTTATTTGAACGGCAAGAAACTTGGTCTCCATTTCATATTTCCCTA  4354

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4355  AAGCCATACCACATTTCAAAGTTTATCTACCGTCATGGACAGATCAGGGTCTTCAATCATTCACGAGACAGGTG  4428

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4429  GTTAAGGGTTCTTTCTCCATTTGCACCAGACTATATCCAACGGTCTCTCTTTCACAGAAAAGGTATTAATGAAG  4502

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4503  AAAGCTGTTTCTCTTTCCTTCGCTTTATTGATATATCTCCAGCAGAAATGGCAAACCTTATGCTTCAGGGACTT  4576

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4577  TTGGCCAGATGGTTAGCTCTTTTCCTGTCTCTGAAAGCCTCCTACAGGCTCCATCAGCTACGCTCCTGGGGAGC  4650

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4651  GCCAGAAGGGGAGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTTTCCACTCTCCT  4724

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4725  TTCCAAACCTTTGCAGCTGCCCTTTGTTAAAGTCTCTTGTTTTCAGCAGCCACTGTAAAGCAGTGAGTGGCTAC  4798

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4799  TCAGACCAGGTTGTCCATCAGCGGAGATCAGCTACCTCCTCGCTGCGTCGCTGCCTGCTCACTGAGCTGCCATC  4872

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4873  TTTTTTGTGTGTGGCCAGTCCACGAGTTACCGCAGTGCCATTGGATTCTTACTGCAATGACCGAAGTGCAGAAT  4946

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 4947  ATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCCTGAACTG  5020

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5021  GCTGCAGACTGGCTAAATAGACGATCACAGTTCTTCCCAGAGCCAGCTGGAGGTCTGTGGAGCATCAGACCTCA  5094

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5095  GAATGGCTGGTCTTTCATCAGGATTCCAGGAATACATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGC  5168

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 5169  TCATCCAAGATCTCGGAGAGGCGAGACATGGTTGCTGATTTTCAGAACAGGACATCTGAGATTGTTAAGGAATC  5242

Query  259  --------------------------------------------------------------------  258
                                                                                
Sbjct 5243  AAGATGTAATTCCTGCCATTTTAAGAAGTTACTAAATCTGCTTATCATAATTCAGATCTATGTGTCTG  5310

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