Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13766
- Subject:
- XR_001751322.2
- Aligned Length:
- 5396
- Identities:
- 152
- Gaps:
- 5224
Alignment
Query 1 ATGGGGGGCGGAGTGAGCGGTGAACACACTGAACAGAATCTGAGATTTAATAAGCCAAATCAACAATGTGGGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTTCGTTTTGTTTTTTT-TTTTTGAGACGGAGTCTCGCTC-TGTCACCCAGGCTGCAGTGCAATGGCACGATCT 146
||||||| |||||||.|||||.|.|||||| ||...|||||||||.||||||||||..||||||
Sbjct 1 ----------TTTTTTTCTTTTTGATACGGAATTTCGCTCTTGCTGCCCAGGCTGGAGTGCAATGGTGCGATCT 64
Query 147 CGGCTCACTGCAAGCTCCGCCTCTCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCCCAGTAGCTGGGACTACA 220
|||.||||||.||.|||||||||.||||||||.||.|||||||||||||||.||.||.||||||| ||||||||
Sbjct 65 CGGTTCACTGTAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGGCTCCCAAGTAGCT-GGACTACA 137
Query 221 GGCGCCCGCCACCATGCCCGGCTAATTTTTTGTATTTT------------------------------------ 258
|||.||||||||||.|||||||||| ||||||||||||
Sbjct 138 GGCACCCGCCACCACGCCCGGCTAA-TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATATTGGTCAGGCTG 210
Query 259 -------------------------------------------------------------------------- 258
Sbjct 211 GTCTCGAGCTCCTGACCTCAGGTGATTCGACCACCTGACCTCCCAAAGTGCTGGGATTACAGGCGTGTGGCACT 284
Query 259 -------------------------------------------------------------------------- 258
Sbjct 285 GCACCCTGACACAAATTTAACTTTTTAAAGGTCAGTTAACTCAGCACAAGAAGGCTACTTGATGACCTTAATAA 358
Query 259 -------------------------------------------------------------------------- 258
Sbjct 359 AGTACTTTTTAGTTAAATGCTAAGGGCCAGGTTAAAATGGATTAAAGAATGAGACCCAAAGGAACTGAATTAAC 432
Query 259 -------------------------------------------------------------------------- 258
Sbjct 433 AGCATATTTAACTTTCAGTAAGTTCTAATTCTTATCTACACCTAGGCCTTACCCTAGGCAATTCTCACCACACA 506
Query 259 -------------------------------------------------------------------------- 258
Sbjct 507 TCCTGGTAGTTGGGTCGATTACATTTATTATGTTGTCTTTTTTGTAGAGACGGGGTCTCGCTATGTTGACCAGT 580
Query 259 -------------------------------------------------------------------------- 258
Sbjct 581 CTAATGGACTGCTCTGAGACGTTTGGCCTGAGGTGATCCTTCCAGGCAGGAGGATCACTTCAGGCCAGGAGACT 654
Query 259 -------------------------------------------------------------------------- 258
Sbjct 655 GGGAACCAGCCCAGTAGACTGGGCAACATAGCGAGACCCCAAGTTTAGTAAATGTGGGTGGCAGTGGACTCAAA 728
Query 259 -------------------------------------------------------------------------- 258
Sbjct 729 TTGTAGAATTGGCACAGGTAAAAGCAATTATTCGCTTTTCAGAGGCACACTGTGTGGATGTGAGAACAGGCTGG 802
Query 259 -------------------------------------------------------------------------- 258
Sbjct 803 CATTTCCGATAACAGGTCTGCGTGTTCCCAAGTCCTTGTATCCCACAACCTTCACGTAGACATCTTATCTAACT 876
Query 259 -------------------------------------------------------------------------- 258
Sbjct 877 ATGCTGTCCTACCCAACCTATAGCGTTCTTGCTCCCAGAGTCTAAATGGGAGCCCCAAACTAATTACTGTATAG 950
Query 259 -------------------------------------------------------------------------- 258
Sbjct 951 TAGTCGAACTACACACCAGGCACTTCCCCGACAATCTACAACCCCATCCAAAGGGGTCAGAAACTAGTAACAAA 1024
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1025 ATACCAGCTGCGAGCCTCTCCTTCCCCTAAAGAGATCTTATCAACTTGGCTGCACCTTCCCACCTCTAGCCTGC 1098
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1099 GGGAACAAATATCCCAGGATCCCGGGCGGTTTCGATTGACGTTACTTCCGGGAAAAGTAACCTTGCATCGGCGG 1172
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1173 TTGCGGGCCTGGAAAGCTCTCGCGACATTTTCTCCTGCGAGATCTGCTTGCTCACTGTAGCGATGACATCCTCC 1246
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1247 TCCTCCTCCCCGCCGCCTTTCGGCAATCTTCGCCAGTCCCAGTCCCGACTAATCTGTACTCAGATGGCATGGAT 1320
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1321 CAGGGTCTCCCCTCGAACCCCGGTTCGCACGGGGCGTCAGGTGGCAGCGGCGGGGTGCGAGCTGCGCGAGGCCG 1394
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1395 ACGGCAGCGGCACTACGGGTGGCCACGGGCAGGCGACGAGCAGTGAGTGTGGGCGGGGTGGGGGTAAGCCACCC 1468
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1469 GTGTAGCGGCTCGATTGTTCTGGCCTGGCTATGGCGCCTCTCCTCCCCCCCGCCATGGCTCCCCGTGTCCCTGC 1542
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1543 TCCGCTCCTCTCAGTGAGTGAAAGTGGCCGCCGCCGCCGCCGGCCCAGCGCCCGCAGCCGCCTCAGCGCCGCCG 1616
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1617 CCATCTTGGGGTCCCAGGAGCCGCGGAGGGAGCGAGCTAGGAGCGTCCACGCCCAACGCAGTCACCGTCCCACG 1690
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1691 GCCTCAGAGAGCGAACCGCGGCTCCACCGTCGGCGGGGCGACCCCCCCCTCCGGACCCCGCCCGCACCCCGCCC 1764
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1765 CCCCTCCGCCGCCGTCGCGGCGGCGGGGCCAGGCGGCCCGAGCCGTGCAGTCGGAGGTCCTTGTGCATGAAGAC 1838
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1839 AGATTTGTTCTATGGCCTCGGAGTTGGGTGCCAGGGATGATGGAGGCTGCACTGAGCTGGCAAAGCCCCTCTAT 1912
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1913 CTTCAGTACTTGGAGAGGGCCCTCCGGTTGGACCATTTTCTGCGACAAACGTCAGCTATCTTCAATAGGAATAT 1986
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1987 TTCTAGTGATGACAGTGAAGATGGACTGGATGACAGTAATCCATTATTGCCCCAGTCTGGGGATCCCTTAATAC 2060
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2061 AAGTTAAGGAAGAACCTCCAAATTCATTGCTTGGTGAAACTTCTGGAGCAGGCAGTTCTGGAATGTTAAACACA 2134
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2135 TATTCTCTGAATGGAGTTCTACAGTCAGAATCAAAATGTGATAAGGGGAATTTATATAATTTCTCTAAGCTGAA 2208
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2209 GAAAAGCAGAAAGTGGCTAAAGAGCATTCTGCTAAGTGATGAATCCAGCGAGGCTGATTCTCAGAGTGAAGACG 2282
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2283 ATGATGAAGAAGAACTCAATCTCAGCAGAGAAGAACTTCACAACATGCTTCGACTACACAAATATAAGAAACTT 2356
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2357 CACCAAAATAAGTATAGTAAAGACAAGGAGTTGCAGCAATATCAGTACTACAGTGCAGGCCTGCTCTCCACATA 2430
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2431 TGACCCTTTCTATGAGCAACAACGGCACCTACTTGGACCCAAGAAAAAGAAATTTAAGGAGGAAAAGAAACTTA 2504
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2505 AAGCTAAGTTGAAAAAAGTGAAGAAAAAAAGACGAAGAGATGAAGAACTTTCCTCTGAAGAATCCCCTCGTCGC 2578
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2579 CATCACCACCAGACCAAAGTCTTTGCCAAGTTTTCTCACGATGCACCTCCCCCTGGCACTAAGAAAAAGCACTT 2652
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2653 ATCCATTGAGCAGCTGAATGCTCGTCGCAGGAAAGTATGGCTCAGCATTGTGAAAAAGGAACTACCAAAGGCAA 2726
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2727 ATAAGCAGAAAGCTTCAGCTCGTAACCTGTTTCTCACCAATAGCCGAAAGCTTGCTCACCAGTGCATGAAGGAG 2800
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2801 GTGCGTCGAGCTGCCTTGCAGGCCCAGAAGAACTGTAAGGAAACCTTGCCTCGTGCCCGCCGCCTCACCAAGGA 2874
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2875 GATGCTTCTGTACTGGAAGAAATATGAGAAAGTAGAGAAGGAGCACCGCAAGAGAGCAGAGAAGGAAGCTTTGG 2948
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2949 AGCAGCGGAAGTTGGATGAGGAAATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAACTTCTTAATTACCCAG 3022
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3023 ACAGAGTTGTATGCCCATTTCATGAGTCGCAAACGAGATATGGGTCATGATGGTATCCAGGAAGAAATCCTAAG 3096
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3097 GAAACTGGAAGACAGTTCTACCCAGAGACAAATCGATATAGGTGGAGGAGTGGTAGTTAACATCACACAGGAGG 3170
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3171 ATTATGATAGTAACCATTTTAAAGCCCAGGCCCTGAAGAATGCTGAAAATGCTTACCATATTCACCAAGCTCGG 3244
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3245 ACAAGGTCATTTGATGAAGATGCAAAAGAAAGTCGAGCAGCTGCCCTACGGGCAGCAAACAAGTCTGGCACTGG 3318
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3319 GTTTGGGGAGAGTTATAGCCTGGCTAACCCATCTATCCGGGCTGGTGAGGATATTCCACAGCCCACAATTTTTA 3392
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3393 ATGGCAAATTGAAAGGTTATCAACTGAAAGGCATGAATTGGTTGGCCAATCTATATGAACAGGGTATTAATGGC 3466
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3467 ATTCTTGCTGATGAAATGGGCCTTGGTAAAACAGTACAGAGCATTGCCCTTCTGGCCCATCTGGCTGAGAGAGA 3540
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3541 GAACATTTGGGGACCTTTCTTAATAATTTCACCTGCGTCTACACTTAACAATTGGCACCAGGAGTTTACTAGAT 3614
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3615 TTGTTCCTAAATTTAAGGTGCTACCATATTGGGGAAATCCTCATGATAGAAAAGTCATCAGAAGGTTCTGGAGT 3688
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3689 CAGAAGACCCTCTACACTCAGGATGCCCCCTTCCATGTGGTTATTACCAGCTATCAGCTGGTGGTGCAGGATGT 3762
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3763 AAAGTATTTCCAGCGGGTCAAGTGGCAATACATGGTACTGGATGAGGCTCAGGCGCTCAAGAGTAGTTCCAGTG 3836
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3837 TTCGTTGGAAGATCCTCTTACAGTTCCAGTGTCGGAATCGGCTTTTGCTAACCGGGACCCCAATTCAGAACACC 3910
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3911 ATGGCAGAGCTTTGGGCTCTGCTGCATTTCATTATGCCAACATTATTTGATTCACATGAGGAATTTAATGAATG 3984
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3985 GTTTTCCAAGGACATTGAGAGCCATGCCGAAAACAAATCTGCTATTGATGAGAATCAACTTTCTCGCTTACACA 4058
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4059 TGATTTTGAAGCCATTTATGCTGAGGAGAATCAAGAAAGATGTGGAAAATGAATTATCTGACAAGATTGAGATT 4132
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4133 CTAATGTATTGCCAACTGACCAGCCGACAGAAGCTGCTATATCAGGCACTAAAGAACAAAATTTCCATTGAGGA 4206
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4207 TTTATTGCAGTCTTCTATGGGCTCTACCCAACAAGCACAGAACACCACCAGCAGCCTCATGAATCTGGTCATGC 4280
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4281 AGTTTAGGAAGGTGTGTAATCACCCGGAGTTATTTGAACGGCAAGAAACTTGGTCTCCATTTCATATTTCCCTA 4354
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4355 AAGCCATACCACATTTCAAAGTTTATCTACCGTCATGGACAGATCAGGGTCTTCAATCATTCACGAGACAGGTG 4428
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4429 GTTAAGGGTTCTTTCTCCATTTGCACCAGACTATATCCAACGGTCTCTCTTTCACAGAAAAGGTATTAATGAAG 4502
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4503 AAAGCTGTTTCTCTTTCCTTCGCTTTATTGATATATCTCCAGCAGAAATGGCAAACCTTATGCTTCAGGGACTT 4576
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4577 TTGGCCAGATGGTTAGCTCTTTTCCTGTCTCTGAAAGCCTCCTACAGGCTCCATCAGCTACGCTCCTGGGGAGC 4650
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4651 GCCAGAAGGGGAGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTTTCCACTCTCCT 4724
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4725 TTCCAAACCTTTGCAGCTGCCCTTTGTTAAAGTCTCTTGTTTTCAGCAGCCACTGTAAAGCAGTGAGTGGCTAC 4798
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4799 TCAGACCAGGTTGTCCATCAGCGGAGATCAGCTACCTCCTCGCTGCGTCGCTGCCTGCTCACTGAGCTGCCATC 4872
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4873 TTTTTTGTGTGTGGCCAGTCCACGAGTTACCGCAGTGCCATTGGATTCTTACTGCAATGACCGAAGTGCAGAAT 4946
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4947 ATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCCTGAACTG 5020
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5021 GCTGCAGACTGGCTAAATAGACGATCACAGTTCTTCCCAGAGCCAGCTGGAGGTCTGTGGAGCATCAGACCTCA 5094
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5095 GAATGGCTGGTCTTTCATCAGGATTCCAGGAATACATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGC 5168
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5169 TCATCCAAGATCTCGGAGAGGCGAGACATGGTTGCTGATTTTCAGAACAGGACATCTGAGATTGTTAAGGAATC 5242
Query 259 -------------------------------------------------------------------- 258
Sbjct 5243 AAGATGTAATTCCTGCCATTTTAAGAAGTTACTAAATCTGCTTATCATAATTCAGATCTATGTGTCTG 5310
