Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13766
Subject:
XR_001755493.2
Aligned Length:
2377
Identities:
143
Gaps:
2219

Alignment

Query    1  ATGGGGGGCGGAGTGAGCGGTGAACACACTGAACAGAATCTGAGATTTAATAAGCCAAATCAACAATGTGGGAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GTTCGTTTTGTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGCAGTGCAATGGCACGATCTCG  148
                  |||.||||||||||||||||                    |||||||.||||||.|||...||||||.
Sbjct    1  ------TTTTTTTTTTTTTTTTGAGA--------------------CAGGCTGGAGTGCAGTGGTGTGATCTCA  48

Query  149  GCTCACTGCAAGCTCCGCCTCTCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCCCAGTAGCTGGGACTACAGG  222
            |||||||||||||||.|||||.||||||||||||||||||||||||||||||.||.||||||||||||||||||
Sbjct   49  GCTCACTGCAAGCTCTGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGG  122

Query  223  CGCCCGCCACCATGCCCGGCTAATTTTTTGTATTTT--------------------------------------  258
            ||||.|||||||.||||||||||||||||.||.|||                                      
Sbjct  123  CGCCTGCCACCACGCCCGGCTAATTTTTTCTACTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGT  196

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  197  CTCAATCTCCTGACCTCGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCGACCGCG  270

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  271  CCCAGCCGAACTTCTGCCTCTTAAATCCAGGGTTCTCCCTGTCAGTACAGTGAGGTGGTAACTAGCAAAAGCTA  344

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  345  TGAGATATGACTGCCTGGGTACATATCCCAGCTCTTTCACTTATCTTTGTGGCTTTACGCAAATTACTTAACCT  418

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  419  CTTTATGATTGTTTCTTCATTTGTAAAAGGAAGATAATAACAGTGCCTATATATAGGGTTTTTATGAAGAATAA  492

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  493  ATGAGATAGTATATATAAAGCACTTAGAACAGTATCTGGCACATACTAGGTGCTCAATAAATGTTAGCGATGAC  566

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  567  ATTTATTACTGTCCCACATTGAGCTGGTGTTTGTTAAACACTGGATGACTGGATAAAATGTACATCTTTCATGC  640

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  641  AGAGATTGCTCGATTATCCATTTCACTGATTCAGGATCAGAGTCTCTTAAGAATCCAGAGAGGGGATGTTGAAG  714

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  715  CCCTAAGAAGTAAAAACACTAAAATGATAACATTTTGACCTTTTGAAAACTCTTTGAAGTGGCAATGGCCACAA  788

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  789  AATTGAGCGGAAACCAAACATATTCAGCCCCATTTCCAGATAAATTGGATTTGCTAAACCACTCAGAATAACAA  862

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  863  GAGCAAGAATTAGATGTTCAGCTAAGCTCTAGCTTCTGATCCTAGATGGTGGCAATAACAACGATAGTATTAAT  936

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct  937  GATAATAGCAGAAACTCTTAATATGTGTGAGGCATTCTTCTAAATGCTTTACATATATTAATTTAATGTTCATC  1010

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1011  GGAGCAGATTCTCCTACTGTATCCAAGAGATCAGAAATTCAGAGCAAAAAGCAGATTGCTGCCTGATAGCAGAT  1084

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1085  CCACTCTAGGAATGGGGAGATTTTCTCATAAATCTAATGACTGGTGAAAGTGACAAGAGGTTAGTCCACTCAGT  1158

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1159  GTTGGAAAGGACAAGATCCTAGAAAGTGGAAATGCTCCACTATTGCTTTAGGGGGAACAGCCTGGCTACAACTG  1232

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1233  GGCAGACTTTCTATTACTAACATCAGGATAATAGGGAAGCTCCTGCCAATGCTGCATAGAACTAAGAACACTTA  1306

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1307  GCAGTGATGGCTGACTTCCAACTGAGCCATTAAGGTAAGTGTAGAAGAAAGCTCCAGGTAGAAATATCTTTGGG  1380

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1381  AACTCAGAGAACACACTGAGTGTTTGAAGCTGGTACTTAATCTATTATTGAACTCAGAGTTTGCCATTCTGGGG  1454

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1455  CCAATTTGAGTCCACTTATGACACCTCCCACAGCACTGCTCATTTCTGTTAACTGGGCTTCACAGAGGGTGAGA  1528

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1529  AGGGCAGCAATCAGATCATATAATTGGGCCTCATTGTAATAAAATGTTGATTTCTGTTGTCCTTGGACTTCCTT  1602

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1603  CCAGCCACAATCACTCTATGATCTTGTCTGAGATTCTTTTTCCTTTCTCTCTCCATTTTGCTGACTGTAATGGA  1676

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1677  ATAATAGCAGAAGCTCTCAATCTGTATGAGGAATATATATGAAGAATGTGTAACATTCACTGTGTTTCCTAATA  1750

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1751  GATGAATTATCTAAAGGACACCTCTTAAGAAGAGATGAGATGGAGCCAACTGTCAGAAAAAAAAATGGGTGAAG  1824

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1825  AAAGTTTCAAGGAGAAGACTCCACAGAGCAGAATGGGAAAGATGGCCAGGAGAAAAGTGAGATAATAAAAGGAA  1898

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1899  AAGCAGTCCCTGACACAGAAGGCAGTGCTGTTCCTGATAAGACACATGACACAAAATATGGTTTTGCTGAGTAT  1972

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 1973  CAAGTTTACTGAGGCTGCCTGGGAACTTGAGCTGTCAGCCAAACAGGAAGAAGGGCCCTTCTGCCTACTCCAAA  2046

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2047  AGGCCTCAGTCAAATGGATATGTTTACTGAGGCTGCCTGGGAGCTGTCAGCCAAACAGGAAGAAGGGCCCTTCT  2120

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2121  GCCTAACTCCAAAAGGCCTAAGTCAAATGGATATGGTGAGATTTAATGATGGATATAAATTACAGCAAATGGAT  2194

Query  259  --------------------------------------------------------------------------  258
                                                                                      
Sbjct 2195  TTCCTATAGAGTGAGGGAAAAAAAAAATCCAGCTACTCCGGAGACTGAGGCAGAATTGCGAGAACCCGGCAGGT  2268

Query  259  ---------  258
                     
Sbjct 2269  GGTTGCAGT  2277

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