Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13766
- Subject:
- XR_938167.3
- Aligned Length:
- 2624
- Identities:
- 143
- Gaps:
- 2466
Alignment
Query 1 ATGGGGGGCGGAGTGAGCGGTGAACACACTGAACAGAATCTGAGATTTAATAAGCCAAATCAACAATGTGGGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTTCGTTTTGTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGCAGTGCAATGGCACGATCTCG 148
|||.|||||||||||||||| |||||||.||||||.|||...||||||.
Sbjct 1 ------TTTTTTTTTTTTTTTTGAGA--------------------CAGGCTGGAGTGCAGTGGTGTGATCTCA 48
Query 149 GCTCACTGCAAGCTCCGCCTCTCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCCCAGTAGCTGGGACTACAGG 222
|||||||||||||||.|||||.||||||||||||||||||||||||||||||.||.||||||||||||||||||
Sbjct 49 GCTCACTGCAAGCTCTGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGG 122
Query 223 CGCCCGCCACCATGCCCGGCTAATTTTTTGTATTTT-------------------------------------- 258
||||.|||||||.||||||||||||||||.||.|||
Sbjct 123 CGCCTGCCACCACGCCCGGCTAATTTTTTCTACTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGT 196
Query 259 -------------------------------------------------------------------------- 258
Sbjct 197 CTCAATCTCCTGACCTCGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCGACCGCG 270
Query 259 -------------------------------------------------------------------------- 258
Sbjct 271 CCCAGCCGAACTTCTGCCTCTTAAATCCAGGGTTCTCCCTGTCAGTACAGTGAGGTGGTAACTAGCAAAAGCTA 344
Query 259 -------------------------------------------------------------------------- 258
Sbjct 345 TGAGATATGACTGCCTGGGTACATATCCCAGCTCTTTCACTTATCTTTGTGGCTTTACGCAAATTACTTAACCT 418
Query 259 -------------------------------------------------------------------------- 258
Sbjct 419 CTTTATGATTGTTTCTTCATTTGTAAAAGGAAGATAATAACAGTGCCTATATATAGGGTTTTTATGAAGAATAA 492
Query 259 -------------------------------------------------------------------------- 258
Sbjct 493 ATGAGATAGTATATATAAAGCACTTAGAACAGTATCTGGCACATACTAGGTGCTCAATAAATGTTAGCGATGAC 566
Query 259 -------------------------------------------------------------------------- 258
Sbjct 567 ATTTATTACTGTCCCACATTGAGCTGGTGTTTGTTAAACACTGGATGACTGGATAAAATGTACATCTTTCATGC 640
Query 259 -------------------------------------------------------------------------- 258
Sbjct 641 AGAGATTGCTCGATTATCCATTTCACTGATTCAGGATCAGAGTCTCTTAAGAATCCAGAGAGGGGATGTTGAAG 714
Query 259 -------------------------------------------------------------------------- 258
Sbjct 715 CCCTAAGAAGTAAAAACACTAAAATGATAACATTTTGACCTTTTGAAAACTCTTTGAAGTGGCAATGGCCACAA 788
Query 259 -------------------------------------------------------------------------- 258
Sbjct 789 AATTGAGCGGAAACCAAACATATTCAGCCCCATTTCCAGATAAATTGGATTTGCTAAACCACTCAGAATAACAA 862
Query 259 -------------------------------------------------------------------------- 258
Sbjct 863 GAGCAAGAATTAGATGTTCAGCTAAGCTCTAGCTTCTGATCCTAGATGGTGGCAATAACAACGATAGTATTAAT 936
Query 259 -------------------------------------------------------------------------- 258
Sbjct 937 GATAATAGCAGAAACTCTTAATATGTGTGAGGCATTCTTCTAAATGCTTTACATATATTAATTTAATGTTCATC 1010
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1011 GGAGCAGATTCTCCTACTGTATCCAAGAGATCAGAAATTCAGAGCAAAAAGCAGATTGCTGCCTGATAGCAGAT 1084
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1085 CCACTCTAGGAATGGGGAGATTTTCTCATAAATCTAATGACTGGTGAAAGTGACAAGAGGTTAGTCCACTCAGT 1158
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1159 GTTGGAAAGGACAAGATCCTAGAAAGTGGAAATGCTCCACTATTGCTTTAGGGGGAACAGCCTGGCTACAACTG 1232
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1233 GGCAGACTTTCTATTACTAACATCAGGATAATAGGGAAGCTCCTGCCAATGCTGCATAGAACTAAGAACACTTA 1306
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1307 GCAGTGATGGCTGACTTCCAACTGAGCCATTAAGGTAAGTGTAGAAGAAAGCTCCAGGTAGAAATATCTTTGGG 1380
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1381 AACTCAGAGAACACACTGAGTGTTTGAAGCTGGTACTTAATCTATTATTGAACTCAGAGTTTGCCATTCTGGGG 1454
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1455 CCAATTTGAGTCCACTTATGACACCTCCCACAGCACTGCTCATTTCTGTTAACTGGGCTTCACAGAGGGTGAGA 1528
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1529 AGGGCAGCAATCAGATCATATAATTGGGCCTCATTGTAATAAAATGTTGATTTCTGTTGTCCTTGGACTTCCTT 1602
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1603 CCAGCCACAATCACTCTATGATCTTGTCTGAGATTCTTTTTCCTTTCTCTCTCCATTTTGCTGACTGTAATGGA 1676
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1677 ATAATAGCAGAAGCTCTCAATCTGTATGAGGAATATATATGAAGAATGTGTAACATTCACTGTGTTTCCTAATA 1750
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1751 GATGAATTATCTAAAGGACACCTCTTAAGAAGAGATGAGATGGAGCCAACTGTCAGAAAAAAAAATGGGTGAAG 1824
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1825 AAAGTTTCAAGGAGAAGACTCCACAGAGCAGAATGGGAAAGATGGCCAGGAGAAAAGTGAGATAATAAAAGGAA 1898
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1899 AAGCAGTCCCTGACACAGAAGGCAGTGCTGTTCCTGATAAGACACATGACACAAAATATGGTTTTGCTGAGTAT 1972
Query 259 -------------------------------------------------------------------------- 258
Sbjct 1973 CAAGTTTACTGAGGCTGCCTGGGAACTTGAGCTGTCAGCCAAACAGGAAGAAGGGCCCTTCTGCCTACTCCAAA 2046
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2047 AGGCCTCAGTCAAATGGATATGGTGAGATTTAATGATGGATATAAATTACAGCAAATGGATTTCCTATAGGGTG 2120
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2121 AGGGAAAAAAAAAAAAGCAAACATTTTACTTAAATTCCTCTATACAATTTAGGGCTGGCAGAAAGGGTAGACTA 2194
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2195 TTACAATGTAGCTGAGCAAATTTTTCCATGTTTGCATAACATGTGTTTTCAACTAAAGATACTCCTTCTATAGT 2268
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2269 CCTACTATATACAACACCCCAAAAAACCTCAAATGTAAGAAAAAGCAATGTGACAGATTTGACCCTGGCCAAGT 2342
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2343 TACACTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGTGTCAGTGTTCATAAAGGCCCTTTTTCTTTT 2416
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2417 TCAAGGATGGGTATAAAGTGTTACTCGGCCGAACGCGGTGGCTCACACCTGTAATTCCAACACTTTGGGAGGCC 2490
Query 259 ---------------------------------- 258
Sbjct 2491 GAGGCAGGTGGATTACGAGGTCAGGAGTTCAAGA 2524
