Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_027499.1
- Aligned Length:
- 3125
- Identities:
- 239
- Gaps:
- 2859
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGATGTTCCCAGGACGCGAGCTAAGTCTGCCCGGCCGGCGCGCGCCGCTTCCGCTTTGGTGGGAAGGACCTCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCCCCTTATAGAAACACTTTCTCCAGGCCGGGCCGGGCTTGGTAAACCTCAGCCGTGCCTGGGTAGAGGACG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGGCTGGGCCGAGCGGGGGTGGAATGAGGGCGTCTAGAACAGAGAAAACTAAGTAGGATGGGGTCGTCCCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGTAATCTGGAAAACAGTTACAGCAACAGGCTCCTCTCATCAGACGGCAGTGCTGGTCGTTTCCTCACTGGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGCGGGGAAGGCTGGGCAGAAAAAGGATGCAACCTTGTTCTCAACCACTTGCTATCTCGTGATTCAGGGATTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAGTCTCTATGGTTTGTTTTGCCCTGAAGAGCAGAAGGCTTCTGTCCCAACTGGTGTTGCCAAAGCAACATA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTAATTCCATGCCATGATCCTGGGTCAAGATCTGCACAATCTGATTGGGCATGTCACCTCGGATGGCAAGGGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGAAGTGGTCAAAATCATGGAGTCCCAGCTTTCGGAGACGCCTTGCAGCTGCCCGGTAACACTTCCAGGGTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGCTCCACAAGGAGGTAGTGGCAGAGGGAGGAAAGATGGGCCAGGAACTCCCATAGGCCATGGTCTCCATGAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCAGATGAATCCACATGGTTATTGACATGCAGAAGCCAATGTCAAAAACTGAACGTCCAAATTGGCTTAAGAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAGCTCAAGAGAACCTTCCGGGTCCTTTGATTCATGAAGTCCAGGGTGATAAAAGTCAAGGCATCAGGAAAAGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACATTCTTTTTCGGCTCGCTTCACCAGGACTGGATCTATGTCGCAGCAGAGGAGACGGAATTCTCTTGAGGCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGAGCAGGTTTCCCCGTCAGGTAGGGAGAGGAAGTGTTTGTATAGAGCCACACTCAGATCCTAGAGGAATCCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAACAGCTTTGTCACTGCAGTTCTCAATCAGTGAATGGAAGAGAAATCTGTATCATTCTCCCACTGAGAATGCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTTACCTCTGGCTGTATAGGATGTGAGGTTCCTAAACCATAACCTAAAGAGGTTGTGCAAAAATTTTCTACAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTAGGCTCTCAGTGCCCTCCAGGGGTCACATGCTGTAATGCATCATCCCCATATTTTCCTGACACTGATGATA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GATTGGGTTGTATAGCTGAAAGTTACAGCCAAATGGATGCAGCAAAGGAACCTACAGCAGTATTTCCCAGCTTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTAATATGCTGATAAACTCACTCTTTTTCTGGGTATCTCAAGACCCCAGGGCGGAAGAAAGGGGTCCAGAGGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATAACCAGTGTCTCTTACCAGGAAAGTGAGGAATACAGCAAGCACAATCTTACAAAAACCTGCTTCTCAGACCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCGGTGGGGGAAGTCTGGATTCCAAAGTCCTCATTCAGCCTTCACTAAAGCTTCAATTTTACTGTCTTAGGATT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACCACCTCCTTCTGAGACATTCTGCTTCTATAACCATCATTGCTAAAAGTCACTGCTAACAACCTTCTAGACA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTCCAATGATTTGTGATTTTTACCACATTAGCACCTTTTTTACTCTTAAGTCACCATCTCCTTTCTCTAACTT 1628
Query 1 ------------------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCA 50
| |||||.|.||||||..|||||||||||||||||||||.|||||
Sbjct 1629 TGAATTCTTTTTTTTTTTGAGACAA---AGTCTGGTTCTGTCGGCCAGGCTGGAGTGCAATGGCGTGATCT--- 1696
Query 51 CTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGG- 123
|.|||||||||||.|.||||||||||||||||||||||.|||||||||||.||||||||||||||||||
Sbjct 1697 ----CAGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGGATTACAGGC 1766
Query 124 -TGCCCACCACCACAGCT-GGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGG 195
|| ||.||||||| || .|||||||||||||||||||.|||||||.||||||.|||||.||||||||.||||
Sbjct 1767 ATG--CATCACCACA-CTCAGCTAATTTTTGTATTTTTATTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGG 1837
Query 196 TCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACT 269
|||..|| |||||||||.|||.|||.|||||||.|||.||||||||||||||||.|||||||.|||||||||
Sbjct 1838 TCTTTAA---CTGACCTCAAGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGACTATAGGAATGAGCCACT 1908
Query 270 GCGCCTGGCC------ATT------------------------------------------------------- 282
||.||||||| |||
Sbjct 1909 GCACCTGGCCTCTTTGATTTCTATAACCATTATAACTAACTCAAATTTGTGTTTTTCCACATAGTATTTTCAAG 1982
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1983 GCATTTTTCTGTTTACTACTTTGTTTGCTTGGTGTAACAAGCATGTGAGGAAAATATTTATTTATGCCTTTTCT 2056
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2057 GCAGGTGAAGAAAATGCACAATGGAAACCACCCAGATGTCCAGTGATAGTGGCATGGACAAATAAATGTGGTAT 2130
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2131 AATCATGAAGATAGAATACTAAATAGCAGTTAAAAAATGAAGGCACCCAGCTTGGTGCACAACATGGATGATTC 2204
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2205 TCACAAATACATAATGTTGAGAAAAAAAGCAAGCCATAACAGAAAATATATGAAAAGCATCCATTTACATGAAG 2278
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2279 CTCAAAAATGGGTGAAATTAAAGTACATCATTCAGGGAAGAAAAACAGTACACTATAAAGAAAAGCAAGGAAAC 2352
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2353 AACAGAAGGCTAGTTGTTACCTCTGGGTAGAGATAGAGGTTTATGAACAGGAAAAGGCATATAGGGGAAGTTGT 2426
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2427 GGGGTGCTGAAAATGTTTATTATTTATTTATTTATTTATTTTTGAGACAGGATCTTACTCTGTTTCCCAGGCTG 2500
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2501 GAGTACAGTGGTGTGATCACTGCAACCTTGACTTCCCAGGCTCCAGAGATCCTCCTACTTCAGCCTTATGAGTA 2574
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2575 GCTGGAACCACAGGTGCACACCACCATGCCCAGCTAATTTTTGTATTTTTGGTAGGGATGAGATTTTGCCATGT 2648
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2649 TGCCCAGGCTGATCTCAAACTCCCGAGCTCAAGCAATCCACCAGCGTCAGTCTCTGAAAATGCTGGGATTACAG 2722
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2723 CGTCAGCCACTGCACCCAGCAGTTTTTTGGGTTTTTTGTTGTTGTTTTATTTGAGACAGGGTCTCACTTCGTCA 2796
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2797 CCCAGGCTGGGGTATGTGGCACAATCAAGGCTCACTGCAGCCTCGACCTCCTGGGTTCAAGCGATCCTCCTCCC 2870
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2871 TCAGCTCTCTAAGTAGCTGGGACTACAGATGCCCACCACCACACCTGGCTAATTTTTTTTAGAGATGGGGTTTT 2944
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2945 GCCATGTTGCCCAGGCTGGGAAAGGAGTTTTTAAAATTGAAAAAAAAAAGCACCCATAAATTATGGTACATCTA 3018
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3019 TCCAATGAAACATTAGGAAGCTGCTAAAAAAAGAATGTGGTGATATAAATAATCTCAGAATTAAAAGCTAAAAA 3092
Query 283 ----------------- 282
Sbjct 3093 AAAAAAAAAAAAAAAAA 3109
