Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_028464.2
- Aligned Length:
- 6785
- Identities:
- 245
- Gaps:
- 6503
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTTTGTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAACATTGCCTGAATAACTTATTGCAAGGAGAATATTTTAGCCCTGTGGAATTATCCTCAATTGCACATCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGATGAGGAGGAGAGGATGAGAATGGCAGAAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTTTACAGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTTCTGGAAATATGGATGACAGTGGTTTTTTCTCTATTCAGTGGTTTAACTTGAATTCTCTCTTGACGGGTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAATTAATATCAGATACATATCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATTTGTCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTAAGGGTGATCTGCCAGATTGCGAAGCTGACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCATCGACCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAACTTATTGGAGAAGAATTAGCACAACTAAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCAAATGATGGCTCAGGAATGTTAGACGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAATTGACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATATCTCAAGATATGACACAGACATCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTTGAAAATCACAACTCAGAAGTAGATGAAGGAAAATTCTGATCAGCTGACATCCTCTTAATACAGCAGCAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAAGGCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGAGTGAAGAAGACATGCTTCAGGCAGCTGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GACCATGTCTTTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGAAAAAAATAATACCTTTAAAAAATAATTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGATATTCATACTTTCCAACATTATCCTGTGTGATTACAGCATAGGGTCCACTTTGGTAATGTGTCAAAGAGAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGGAAATAAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAAAGTGGAACAATGCGTCGGTTGTAGGACTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATAATGATCTTCCAAATATTAGCCAAAGAGGCATTCAGCAATTAAAGACATTTAAAATAGTTTTCTAAATGTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTTTTTCTTTTTTGAGTGTGCAATATGTAACATGTCTAAAGTTAGGGCATTTTTCTTGGATCTTTTTGCAGACT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGCTAATTAGCTCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCTTTTTCTGTCTTGTAGGTAAGTTGGCTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACATCATGTAATAGTGGCTTTCATTTCTTATTAACCAAATTAACCTTTCAGGAAAGTATCTCTACTTTCCTGAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTTGATAATAGTAATGGTTCTAGAAGGATGAACAGTTCTCCCTTCAACTGTATACCGTGTGCTCCAGTGTTTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTACCTGGTTTTCATTATTTTCCCACAATTCTTTTGAAAGAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGTAATCTTTTCTGAGGTTTAGCGTTTTAAGCCCTACGATGGGATCATTATTTCATGACTGGTGCGTTCCTAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTCTGAAATCAGCCTTGCACAAGTACTTGAGAATAAATGAGCATTTTTTAAAATGTGTGAGCATGTGCTTTCCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGATGCTTTATGAATGTCTTTTCACTTATATCAAAACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGCGCCTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATTTTTTCCTTTCTTCTCCAATTGAGAAAACTAGGAGAAGCATAGTATGCAGGCAAGTCTCCTTCTGTTAGAAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACTAAACATACGTACCCACCATGAATGTATGATACATGAAATTTGGCCTTCAATTTTAATAGCAGTTTTATTTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATTTTTTCTCCTATGACTGGAGCTTTGTGTTCTCTTTACAGTTGAGTCATGGAATGTAGGTGTCTGCTTCACAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTTTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGGAACATGAAAATAATTTACTAATGAAAATATGTTTAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATTTATACTGTGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGTACTTAGTGGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCTATAAATAAGAAAGTCCATAGTTTTGATAAATATTCTCTTTAATTGAGATGTACAGAGAGTTTCTTGCTGGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TCAATAGGATAGTATCATTTTGGTGAAAACCATGTCTCTGAAATTGATGTTTTAGTTTCAGTGTTCCCTATCCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCATTCTCCATCTCCTTTTGAAGCTCTTTTGAATGTTGAATTGTTCATAAGCTAAAATCCAAGAAATTTCAGCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTGCACACATTTTATCAGGGAAAGTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTTGATCTAGGATTTATTGCTAACTAACTGAAAAGAGAAGAAAAAATATCTTTTATTTATGATTATAAAATAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTTTTTCTTCGATATAACAGATTTTTTAAGTCATTATTTTGTGCCAATCAGTTTTCTGAAGTTTCCCTTACACA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AAAGGATAGCTTTATTTTAAAATCTAAAGTTTCTTTTAATAGTTAAAAATGTTTCAGAAGAATTATAAAACTTT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AAAACTGCAAGGGATGTTGGAGTTTAGTACTACTCCCTCAAGATTTAAAAAGCTAAATATTTTAAGACTGAACA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTTATGTTAATTATTACCAGTGTGTTTGTCATATTTTCCATGGATATTTGTTCATTACCTTTTTCCATTGAAAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTTACATTAAACTTTTCATACACTTGAATTGATGAGCTACCTAATATAAAAATGAGAAAACCAATATGCATTTT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AAAGTTTTAACTTTAGAGTTTATAAAGTTCATATATACCCTAGTTAAAGCACTTAAGAAAATATGGCATGTTTG 3034
Query 1 -------------------------------------------------ATGGAGTCTTGCTCTGTCACCCAGG 25
|.|||||||||||.||||.||||||
Sbjct 3035 ACTTTTAGTTCCTAGAGAGTTTTTGTTTTTGTTTTTGTTTTTTTTTGAGACGGAGTCTTGCTATGTCTCCCAGG 3108
Query 26 CTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGC 99
||||||.|||.||||..||||||..||||||.||||.||..|.|.||.|||||||||.|||||||||.||||||
Sbjct 3109 CTGGAGGGCAGTGGCATGATCTCGGCTCACTACAACTTCCACCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGC 3182
Query 100 CTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGT 173
||||.|||||||||||||||||||.|||||||||||||.|.|||..||||||||||||||.||||||||..|||
Sbjct 3183 CTCCAGAGTAGCTGGGATTACAGGCGCCCACCACCACACCCGGCAGATTTTTGTATTTTTGGTAGAGACGCGGT 3256
Query 174 TTTACCAT-ATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGC 246
||.|.||| .||||||||.|||||||||||||||||||||||||||.|||||||||||||||.||||||||||.
Sbjct 3257 TTCATCATGTTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCTGCCTTGGCCTCCCAAAGTGT 3330
Query 247 TGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA---------TT----------------------------- 282
||||||||.|||..|||||||||||||||||||| ||
Sbjct 3331 TGGGATTACAGGCATGAGCCACTGCGCCTGGCCAGCTAGAGAGTTTTTAAAGCAGAGCTGAGCACACACTGGAT 3404
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3405 GCGTTTGAATGTGTTTGTGTAGTTTGTTGTGAAATTGTTACATTTAGCAGGCAGATCCAGAAGCACTAGTGAAC 3478
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3479 TGTCATCTTGGTGGGGTTGGCTTAAATTTAATTGACTGTTTAGATTCCATTTCTTAATTGATTGGCCAGTATGA 3552
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3553 AAAGATGCCAGTGCAAGTAACCATAGTATCAAAAAAGTTAAAAATTATTCAAAGCTATAGTTTATACATCAGGT 3626
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3627 ACTGCCATTTACTGTAAACCACCTGCAAGAAAGTCAGGAACAACTAAATTCACAAGAACTGTCCTGCTAAGAAG 3700
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3701 TGTATTAAAGATTTCCATTTTGTTTTACTAATTGGGAACATCTTAATGTTTAATATTTAAACTATTGGTATCAT 3774
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3775 TTTTCTAATGTATAATTTGTATTACTGGGATCAAGTATGTACAGTGGTGATGCTAGTAGAAGTTTAAGCCTTGG 3848
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3849 AAATACCACTTTCATATTTTCAGATGTCATGGATTTAATGAGTAATTTATGTTTTTAAAATTCAGAATAGTTAA 3922
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3923 TCTCTGATCTAAAACCATCAATCTATGTTTTTTACGGTAATCATGTAAATATTTCAGTAATATAAACTGTTTGA 3996
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3997 AAAGGCTGCTGCAGGTAAACTCTATACTAGGATCTTGGCCAAATAATTTACAATTCACAGAATATTTTATTTAA 4070
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4071 GGTGGTGCTTTTTTTTTTTGTCCTTAAAACTTGATTTTTCTTAACTTTATTCATGATGCCAAAGTAAATGAGGA 4144
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4145 AAAAAACTCAAAACCAGTTGAGTATCATTGCAGACAAAACTACCAGTAGTCCATATTGTTTAATATTAAGTTGA 4218
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4219 ATAAAATAAATTTTATTTCAGTCAGAGCCTAAATCACATTTTGATTGTCTGAATTTTTGATACTATTTTTAAAA 4292
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4293 TCATGCTAGTGGCGGCTGGGCGTGGTAGCTCACGCCTGTAATCCCAGCATTTTGGGAGGCCGAAGTGGGTGGAT 4366
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4367 CACGAGGTCGGGAGTTCGAGACCAGCTTGGCCAAAATGGTGAAACCCCATCTGTACTAAAAACTACAAAAATTA 4440
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4441 GCTGGGCGCGGTGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCTGAGGCAGGAGAATTGCTTGAACCCTGG 4514
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4515 CGACAGAGGATGCAGTGAGCCAAGATGGTGCCACTGTACTCCAGACTGGGCGACAGAGTGAGACTCTGTCTCAA 4588
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4589 AAAAAAAAAAAAAATCATGCTAGTGCCAAGAGCTACTAAATTCTTAAAACCGGCCCATTGGACCTGTACAGATA 4662
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4663 AAAAATAGATTCAGTGCATAATCAAAATATGATAATTTTAAAATCTTAAGTAGAAAAATAAATCTTGATGTTTT 4736
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4737 AAATTCTTACGAGGATTCAATAGTTAATATTGATGATCTCCCGGCTGGGTGCAGTGGCTCACGCCTGTAATCCC 4810
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4811 AGCAGTTCTGGAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGTTCAAGACCAGTCTGGGCAACATGGTGAA 4884
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4885 ACCTCGTTTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTTGCACACACTTGTAATCCCAGCTACTCAGGAG 4958
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4959 GCTAAGAATCGCATGAGCCTAGGAGGCAGAGGTTGCAGAGTGCCAAGGGCTCACCACTGCATTCCAGCCTGCCC 5032
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5033 AACAGAGTGAGACACTGTTTCTGAAAAAAAAAAATATATATATATATATATATATGTGTGTATATATATATGTA 5106
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5107 TATATATATGACTTCCTATTAAAAACTTTATCCCAGTCGGGGGCAGTGGCTCACGCCTGTAATCCCAACACTTT 5180
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5181 GGGAGGCTGAGGCAGGTGGATCACCTGAAGTCCGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCATC 5254
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5255 TCTACTAAAAATACAAAACTTAAGCCAGGTATGGTGGCGGGCACCTGTAATCCCAGTTACTTGGGAGGCTGAGG 5328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5329 CAGGAGAATCGTTTAAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGTGCCATTGCACTCTAGCCTGGGC 5402
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5403 AACAAGAGTAAAACTCCATCTTAAAGGTTTGTTTGTTTTTTTTTAATCCGGAAACGAAGAGGCGTTGGGCCGCT 5476
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5477 ATTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCTGAGACGGAGTCTAGCTCTGCTGCCCAGGCTG 5550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5551 GAGTACAATGACACGATGTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTC 5624
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5625 CCAAGTACCTGGGATTACAGGCACCTGCCACTACACCTGGCGAATATTTGTTTTTTTTAGTAGAGACGGGCTTT 5698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5699 TACCATGTTAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATT 5772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5773 ACAGGTGCAGGCCACCACACCCGGCCTTGGGCCACTGTTTTCAAAGTGAATTGTTTGTTGTATCGAGTCCTTAA 5846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5847 GTATGGATATATATGTGACCCTAATTAAGAACTACCAGATTGGATCAACTAATCATGTCAGCAATGTAAATAAC 5920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5921 TTTATTTTTCATATTCAAAATAAAAACTTTCTTTTATTTCTGGCCCCTTTATAACCAGCATCTTTTTGCTTTAA 5994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5995 AAAATGACCTGGCTTTGTATTTTTTTAGTCTTAAACATAATAAAAATATTTTTGTTCTAATTTGCTTTCATGAG 6068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6069 TGAAGATTATTGACATCGTTGGTAAATTCTAGAATTTTGATTTTGTTTTTTAATTTGAAGAAAATCTTTGCTAT 6142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6143 TATTATTTTTTCCAAGTGGTCTGGCATTTTAAGAATTAGTGCTAATAACGTAACTTCTAAATTTGTCGTAATTG 6216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6217 GCATGTTTAATAGCATATCAAAAAACATTTTAAGCCTGTGGATTCATAGACAAAGCAATGAGAAACATTAGTAA 6290
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6291 AATATAAATGGATATTCCTGATGCATTTAGGAAGCTCTCAATTGTCTCTTGCATAGTTCAAGGAATGTTTTCTG 6364
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6365 AATTTTTTTAATGCTTTTTTTTTTTTTGAAAGAGGAAAACATACATTTTTAAATGTGATTATCTAATTTTTACA 6438
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6439 ACACTGGGCTATTAGGAATAACTTTTTAAAAATTACTGTTCTGTATAAATATTTGAAATTCAAGTACAGAAAAT 6512
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6513 ATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCACTGTGGCAGTGCCGCTTGCTCAGGACCCAG 6586
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6587 CCCTGCAGCCCTTCTGTGTGTGCTCCCTCGTTAAGTTCATTTGCTGTTATTACACACACAGGCCTTCCTGTCTG 6660
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6661 GTCGTTAGAAAAGCCGGGCTTCCAAAGCACTGTTGAACACAGGATTCTGTTGTTAGTGTGGATGTTCAATGAGT 6734
Query 283 --------------------------------------------------- 282
Sbjct 6735 TGTATTTTAAATATCAAAGATTATTAAATAAAGATAATGTTTGCTTTTCTA 6785
