Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_033709.1
- Aligned Length:
- 4700
- Identities:
- 249
- Gaps:
- 4428
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGTTGCGGGATCTCACAGGCTTTAAACCGCGGCGCCGCGGCGCCCGGGTGTGGATCCCTAGATGGGAGCCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGATGGGCCGGGTGCCTGGTGGGTGGCAGTCGGGGCTGACGGCGGCGGCACTTTGCCGCCTCAGGCCCTGGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTCACCCCGCCGCCTGCCCAGGCGGGCCGGCCCTGCCCGTCCACCGGCCGCCGAGAGTCCCCGGCCTTGGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCCGGGGCCGCTGACTGGCCTCGGTCACCTCCCGGGGAAGGCTCCCGCGCCTCCATCTGCCCCCGCAGGAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACCCTCTTCTCGCCCGCGAGGCTTCTCCGGGTGGGATCGTCCTGGCCCCCAGCCCTAAGGGATCCGCCCCCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGAGCATCCGCCGCCCCTCGGAGACCACTCCAGCTCGGACGGACCCACTCCAGCCCCCGCTGCACGCGGAAGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCATCCTCCCCGCCTGCCCCGTTCCCTCCCCCTTCTCCTGTGGGACAACCAGGGACCGCAGCTCCCCGCTCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGGTGTGGGGGCTCCGACACGAACGCCTCTGCTCGCAGGGCGGTGAGCGCAGATCCCACGGGTCCCTCGGTCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGTCGAGGCTGCTTCCGTTTCCATCCCGGACCCGACAATGGGCGGGAAAAAGAAGGCTTTACACGACTACGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCGGAGTTCACCGACCTGGTGGTGAAGCACCTGATTGAGCACAGTGACTCTGGGGACACGTCTGTGGTGGAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCTTTACTGCAGGGCCTGCGAGCTGCCCGTGCGCGTGCGGAGGGACCGCATCCTGGAACACCTGTCCTCGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGCAGCACGGCCTGCGGACGCCCATTCTCATGTAAATGTCAGTGCCAACGCTGGTGTTTCAGGAGTCATCCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCGGGCTGCGGGCTATTTTAGGATTCTCTGCCCTGCAAACGTTTCCAAAGTACGTGGACAGGCCGCCTGATGAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTACGTTTACGGGATCTGCTAGTGGCTTGCCTACTTAGGGAGTAAACCCTGTGAAGTCTCGCAGTTTTGTTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTGTGCGTGGCCACCTGAATGCTGCCTTATCACAAGCCAGATACATACTGGTCTGTAGGGTAACTCCCCACTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTGATCCTCTGAGATGATTGTGGACTGGGTGCTGTGAGTCCTGCCACTTTGTTTAAGTGAATGTGTCTTTTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGCTCAGCCGCCTCGGATCTCGCTGCCACCAGCCTTACTGCACACCCGTGCCACCCGCCCTTGCCCCGTCAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTCAGCCTCAGCTCATTCTCTCAGGCAGTCCCAGCATTGGCACGGTACCTCCTCCCGCTGTGGGCCACACGTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTGCTCCCTGTCAACCCTCCTGCCATCAGCACCACCACCAGCGACTTGTCTGCCCGGGAGGATGCAACACCATC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGCCTCCACCGGCCACCTTTCAGTGTTTCCTGCTTTCCAAGTAAAGATACCAGCAGTGCCCTCAGAGCAGACCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCCAGAGTTTTTCTGAAGCCTCCCACAGGGTGCTCCCCGGAGGAGGCCCGAGATGCTCTCGTGACTTTGGAGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGGGTGGCTGGCCACCTTGGCCTGGGCATCTTTGGGGTGGGCTTCGGGAGCCCGGCACTGCTGCAGAGTGTGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGATGAGAACAGCTGCTGCTTGCTGTACGTGGTGGAGGACCAGCTGTGTGATGTGGAGCAAGCCTTCAGAGCTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCATTTGGGCCAACACCAGAGTGGTTCGGGAACAGGATGCAGACATTGTCCTCAACGACCAGCGGCACTTTGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCCGGTTTTCCAGTTCTTGCACAAGCAAGTTTGTGTCAGCCACGCCCTGGGGAGGATCCACTGGATCACCGCCG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCACTGCCTGTTCCCGGCGGCCTCTCCGGCTTCCCTAAAGAGAGCAGGTGGGACTTTCTACAACGCTGCTGTGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACGACGTGGATGCCGTATGCATGTTGCTGGGGGAAGCCACTCCGGACACTGTGTTTTCTCTGGGACATGTCTTC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGCCCAGATATGGCCGCCTTAAAAGATGCAGATGCTGTTGTGATCAGCATGAAGTTTCCCTGTGAGGCCGTGGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAGCGTGGACATCAGCCAGCACTGCACAGACAGCTGCGACCAGGACGTCAGCCAGCACTGCACAGACAGCTGCG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCAGAGACTGGAGGGAAATAACCTCCTGAAATCACCAAAGAGCAGTTCCTCAGGGCCTTCCGGGTGACCGTGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCGTGGAGCAGTCGTGGTGAAACCGGTCAGCTGTGGACCTGCCCTGCGAATCGGCAGAGGCCTCCGTGGTGAAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACAGAAGCTCCGTGAACCAACTCGAGGCTGGAGCCAAGATCCTGCCTGATATCCAGTTGCCTGTTTCACTTGTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACTGTTACTGGGAGAGGGAGACAAAACCTCATGGCAATCTTGTCCTCACTGGAGACTCAGAAGGGGAAGCATTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGAAACCATGTATGTTTCATTTCTGGTTTAACCAGGCTTTTCAGGATGGGACTTCAGACCAAGGACACAAGTTG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGCTTGCTTAGGTGTTTTGTGTTGTGCGCAGGCCTCAGAGATGCTCTTCCGGTCAGAGTTCCCTTGGCAGGGCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTGGAGGCCTCTGGTTGGCTCTCTCAGGAAGAGGGCAGGTCAGGGATTGGGCGGTGTAAATTGACTCAGAAACC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGCGGTTTCAGCTTTTCTGTGGCAAACAGGGCCGAGGGCTGGTGAAGCTGTTAAGGCTAAATGTCGCATGCATG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGGCGGGCTGCAGGCCTCCTTAGGCCTTTTTTGGGGTAATTACACCAGTATTTAAAAACATTTTTTTTTGTTTG 2812
Query 1 -------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGC 67
||||||||||||.||||||||||||||||||||||||||.||||||||..||||||||||||||.|.
Sbjct 2813 TTTTGAGATGGAGTCTTGCCCTGTCACCCAGGCTGGAGTGCAATGGTGCGATCTCGGCTCACTGCAACCTCCGT 2886
Query 68 GTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACA----GGTGCCCACCACCACA 137
.|.||||||||||||||||||.|||.||||||||.||||||||||||||||||| .||| |||||||
Sbjct 2887 CTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTTCTGAGTAGCTGGGATTACACGCGTGTG-CCACCAC---- 2955
Query 138 GCT-GGCTAATTTTTGTATTTTTAGTAGAGACTGGG-TTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGA 209
||| ||||||||||||||||||||||||||| |||| |||.|||||.||||||||.|||||||||||||.||||
Sbjct 2956 GCTCGGCTAATTTTTGTATTTTTAGTAGAGA-TGGGATTTCACCATGTTGGCCAGGCTGGTCTCGAACTACTGA 3028
Query 210 CCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCAC--TGCGCCTGGCC-- 279
|||| |||.|||.||||||.||||.|||||||||||||||||||.|||.||||||||| |||.| ||||
Sbjct 3029 CCTC--GTGATCCACCTGCCATGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCTC--GGCCTA 3098
Query 280 -------ATT---------------------------------------------------------------- 282
|||
Sbjct 3099 AAAAACAATTTTCTTGAAGAATCCGATTTTGTGCATAGTAATGACACAGCACCATTCCTGAGAAATAGGAAATA 3172
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3173 TATGTGTGTGGTATGAAAAGCCCATATTCTGTTCTTGTCACCTGAATCTAGGCTTCCTCTTTGGATGTGAACGC 3246
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3247 GGGAATGAACAGTGGCTGTTTTCCACCCAAAGGGGCGTGGAGACCTTTTGGAAACGGGCTTTCTCCTTTCCATT 3320
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3321 TTGCAGCCGGGGGCGGGTGGAAACCTTCCTTCGAAGGGTAGTGCCTTGGGGAGCAGCAGACCTGCTCTGAGTCC 3394
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3395 AGCTTAGCTTTCCAAAATTCTGTGTGGAACTTACTGGAGATGTTTTTATATATTTGAAAATAATGGCCTGTATT 3468
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3469 TCTCACGCTATACTTAAAAAAAATAACTAACCTTTTAAACAAAGATATTCAAACTCACCCTTGTGCTGAAAGCA 3542
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3543 CTCACATTTCTGTGTTCATTCCTGAAAGGGCGTTTTAGAGTCCCCGTTTCTACGTTCTATGTGGCACCCTCTTG 3616
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3617 CCGAGGGAACATCCAGAATCCCTCCACTTCCTGTCTAGTTTGAGGCCTCAACACCTTCATGATCCAGAGTCCTG 3690
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3691 CGGCTATGAGGGGGTGGGCCCACCACCGCCCAGCCCTCCTTGGTGGACGTGGGGACAGGTAGGAGCCTAGGGAA 3764
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3765 AGGGGTGGGCGGGCTCTGGTGTGACGGCGTGAGCGCTAGCCAGGAAGATGGGGCCAGGGCTTGGCATGGCACCT 3838
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3839 CACCTGTGGGGGAACTCGGCGGAGCTTCCTGGCGGCATCTCCCCCTCTTGCCTTGGTCCTTTCTATCTTTGTTT 3912
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3913 TAGGCCAATTTCTAAAAAGACTGAGGCCTCCTTCAAGGTTGAACAGATTTCTAGAGCCTTGTTTTTGCTGTGAC 3986
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3987 AAGTCCCTAGTCCCTGTTCACAACTCTGAAACCAAGAAACCTGAGAACCAAGAGAACTGAAATGAAGCCCGTTG 4060
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4061 GTCTCAGCCTGGCTTGAGCCAACATGAGGCTCTCTGCTGCCTTTTGTTTTCTTAGGTTTTGCTGAGAAACGGGA 4134
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4135 GTGCGTTCTGTGTCGGTGTTTGTGACGCCCTGAGACCCTGCTTGGCCTAGCTAAAGTCCAGAAGGCCTGGGCCC 4208
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4209 CACAGGGCTTGGATGAGGGCTCATGGGCCTGTACTTCAGGAGGCCTGAGAGGCCCGGTCAGTCCCATGAGGCTA 4282
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4283 CTCGGCTTGGCCCGCAGGTCCTCCGAGGCACAGGGCAGAGGGACACCCCAGGGACCCATCAGACTCACGACACA 4356
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4357 GAGAAACTCAAGTGGGGTGCCAGGGCCGGCCACAGAGGCCACGGGCTTCCTGCCTGTGAGGAGCCGCCCTGTTT 4430
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4431 GTCTGAGCCCTTTGGAGATTTAGGTTGAGTCATGAGAACCGGTCATTGGAACATACACTTTATTATGTTACAAA 4504
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4505 AACAAAAATCCCCACTGAAACACAGCTAAAAAAATAACACATTTTCCCAAGATTACATTACCAAAAACAGTTGT 4578
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4579 TATGTCATTGGAGGGCGTCCATTAATACTGCTCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATTTC 4652
Query 283 -------------------------------------- 282
Sbjct 4653 GTTTTCACCTTAAAGCATTAAAGTGCTTTAACTGGTAA 4690
