Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_033712.1
- Aligned Length:
- 3334
- Identities:
- 249
- Gaps:
- 3062
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGCTTCCGTTTCCATCCCGGACCCGACAATGGGCGGGAAAAAGAAGGCTTTACACGACTACGCGGCGGAGTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCGACCTGGTGGTGAAGCACCTGATTGAGCACAGTGACTCTGGGGACACGTCTGTGGTGGAGACCCTTTACTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGGCCTGCGAGCTGCCCGTGCGCGTGCGGAGGGACCGCATCCTGGAACACCTGTCCTCGGGCAGGCAGCACG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCTGCGGACGCCCATTCTCATGTAAATGTCAGTGCCAACGCTGGTGTTTCAGGAGTCATCCCAGCGGGCTGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCTATTTTAGGATTCTCTGCCCTGCAAACGTTTCCAAAGTACGTGGACAGGCCGCCTGATGACACTACGTTTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGGATCTGCTAGTGGCTTGCCTACTTAGGGAGTAAACCCTGTGAAGTCTCGCAGTTTTGTTAAAGTGTGCGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCACCTGAATGCTGCCTTATCACAAGCCAGATACATACTGCCGCCTCGGATCTCGCTGCCACCAGCCTTACTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACACCCGTGCCACCCGCCCTTGCCCCGTCAGCCTCAGCCTCAGCTCATTCTCTCAGGCAGTCCCAGCATTGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACGGTACCTCCTCCCGCTGTGGGCCACACGTCTCTGCTCCCTGTCAACCCTCCTGCCATCAGCACCACCACCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGACTTGTCTGCCCGGGAGGATGCAACACCATCTGCCTCCACCGGCCACCTTTCAGTGTTTCCTGCTTTCCAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAAAGATACCAGCAGTGCCCTCAGAGCAGACCAGCCAGAGTTTTTCTGAAGCCTCCCACAGGGTGCTCCCCGGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAGGCCCGAGATGCTCTCGTGACTTTGGAGCCGGGGTGGCTGGCCACCTTGGCCTGGGCATCTTTGGGGTGGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTTCGGGAGCCCGGCACTGCTGCAGAGTGTGGTGGATGAGAACAGCTGCTGCTTGCTGTACGTGGTGGAGGACC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCTGTGTGATGTGGAGCAAGCCTTCAGAGCTGAGCATTTGGGCCAACACCAGAGTGGTTCGGGAACAGGATGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGACATTGTCCTCAACGACCAGCGGCACTTTGATCCGGTTTTCCAGTTCTTGCACAAGCAAGTTTGTGTCAGCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACGCCCTGGGGAGGATCCACTGGATCACCGCCGTCACTGCCTGTTCCCGGCGGCCTCTCCGGCTTCCCTAAAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGCAGGTGGGACTTTCTACAACGCTGCTGTGCACGACGTGGATGCCGTATGCATGTTGCTGGGGGAAGCCACT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCGGACACTGTGTTTTCTCTGGGACATGTCTTCTGCCCAGATATGGCCGCCTTAAAAGATGCAGATGCTGTTGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GATCAGCATGAAGTTTCCCTGTGAGGCCGTGGTTAGCGTGGACATCAGCCAGCACTGCACAGACAGCTGCGACC 1406
Query 1 -----------------------------------------------ATGGAGTCTTGCTCTGTCACCCAGGCT 27
||||||||||||.||||||||||||||
Sbjct 1407 AGGACGTCAGCCAGCACTGCACAGACAGCTGCGACCAGAGACTGGAGATGGAGTCTTGCCCTGTCACCCAGGCT 1480
Query 28 GGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCT 101
||||||||||||.||||||||..||||||||||||||.|..|.||||||||||||||||||.|||.||||||||
Sbjct 1481 GGAGTGCAATGGTGCGATCTCGGCTCACTGCAACCTCCGTCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCT 1554
Query 102 CCTGAGTAGCTGGGATTACA----GGTGCCCACCACCACAGCT-GGCTAATTTTTGTATTTTTAGTAGAGACTG 170
.||||||||||||||||||| .||| ||||||| ||| ||||||||||||||||||||||||||| ||
Sbjct 1555 TCTGAGTAGCTGGGATTACACGCGTGTG-CCACCAC----GCTCGGCTAATTTTTGTATTTTTAGTAGAGA-TG 1622
Query 171 GG-TTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAG 243
|| |||.|||||.||||||||.|||||||||||||.|||||||| |||.|||.||||||.||||.||||||||
Sbjct 1623 GGATTTCACCATGTTGGCCAGGCTGGTCTCGAACTACTGACCTC--GTGATCCACCTGCCATGGCCTCCCAAAG 1694
Query 244 TGCTGGGATTATAGGAGTGAGCCAC--TGCGCCTGGCC---------ATT------------------------ 282
|||||||||||.|||.||||||||| |||.| |||| |||
Sbjct 1695 TGCTGGGATTACAGGCGTGAGCCACCATGCTC--GGCCTAAAAAACAATTTTCTTGAAGAATCCGATTTTGTGC 1766
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1767 ATAGTAATGACACAGCACCATTCCTGAGAAATAGGAAATATATGTGTGTGGTATGAAAAGCCCATATTCTGTTC 1840
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1841 TTGTCACCTGAATCTAGGCTTCCTCTTTGGATGTGAACGCGGGAATGAACAGTGGCTGTTTTCCACCCAAAGGG 1914
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1915 GCGTGGAGACCTTTTGGAAACGGGCTTTCTCCTTTCCATTTTGCAGCCGGGGGCGGGTGGAAACCTTCCTTCGA 1988
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1989 AGGGTAGTGCCTTGGGGAGCAGCAGACCTGCTCTGAGTCCAGCTTAGCTTTCCAAAATTCTGTGTGGAACTTAC 2062
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2063 TGGAGATGTTTTTATATATTTGAAAATAATGGCCTGTATTTCTCACGCTATACTTAAAAAAAATAACTAACCTT 2136
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2137 TTAAACAAAGATATTCAAACTCACCCTTGTGCTGAAAGCACTCACATTTCTGTGTTCATTCCTGAAAGGGCGTT 2210
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2211 TTAGAGTCCCCGTTTCTACGTTCTATGTGGCACCCTCTTGCCGAGGGAACATCCAGAATCCCTCCACTTCCTGT 2284
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2285 CTAGTTTGAGGCCTCAACACCTTCATGATCCAGAGTCCTGCGGCTATGAGGGGGTGGGCCCACCACCGCCCAGC 2358
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2359 CCTCCTTGGTGGACGTGGGGACAGGTAGGAGCCTAGGGAAAGGGGTGGGCGGGCTCTGGTGTGACGGCGTGAGC 2432
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2433 GCTAGCCAGGAAGATGGGGCCAGGGCTTGGCATGGCACCTCACCTGTGGGGGAACTCGGCGGAGCTTCCTGGCG 2506
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2507 GCATCTCCCCCTCTTGCCTTGGTCCTTTCTATCTTTGTTTTAGGCCAATTTCTAAAAAGACTGAGGCCTCCTTC 2580
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2581 AAGGTTGAACAGATTTCTAGAGCCTTGTTTTTGCTGTGACAAGTCCCTAGTCCCTGTTCACAACTCTGAAACCA 2654
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2655 AGAAACCTGAGAACCAAGAGAACTGAAATGAAGCCCGTTGGTCTCAGCCTGGCTTGAGCCAACATGAGGCTCTC 2728
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2729 TGCTGCCTTTTGTTTTCTTAGGTTTTGCTGAGAAACGGGAGTGCGTTCTGTGTCGGTGTTTGTGACGCCCTGAG 2802
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2803 ACCCTGCTTGGCCTAGCTAAAGTCCAGAAGGCCTGGGCCCCACAGGGCTTGGATGAGGGCTCATGGGCCTGTAC 2876
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2877 TTCAGGAGGCCTGAGAGGCCCGGTCAGTCCCATGAGGCTACTCGGCTTGGCCCGCAGGTCCTCCGAGGCACAGG 2950
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2951 GCAGAGGGACACCCCAGGGACCCATCAGACTCACGACACAGAGAAACTCAAGTGGGGTGCCAGGGCCGGCCACA 3024
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3025 GAGGCCACGGGCTTCCTGCCTGTGAGGAGCCGCCCTGTTTGTCTGAGCCCTTTGGAGATTTAGGTTGAGTCATG 3098
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3099 AGAACCGGTCATTGGAACATACACTTTATTATGTTACAAAAACAAAAATCCCCACTGAAACACAGCTAAAAAAA 3172
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3173 TAACACATTTTCCCAAGATTACATTACCAAAAACAGTTGTTATGTCATTGGAGGGCGTCCATTAATACTGCTCG 3246
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3247 GAGAAGCACGATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGTGCTTTAACTG 3320
Query 283 ---- 282
Sbjct 3321 GTAA 3324
