Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_121565.1
- Aligned Length:
- 3647
- Identities:
- 244
- Gaps:
- 3367
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAATTGTAACTTGGCCAGGAGAATCAGAAGCTAGAGGAAAATGGAGGAGGAAAGAAGAACCACATCTGTTTCTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCGCCATGGCACCCGGGGGGGTCTCGAATTACACTTCCATCCCACCTTCCCCCTCCCTCCCGGCCAGGGTTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTCAGGAATAGTTGAAACTGTGATTCACTGCTACAGTTCTCTGTGCTGTCCTGGTTGCTACAAGCTGAAGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCTCAGTTCTGGGGACGAAAGAGGTATGGGCTACGAGGGATTAAAAAATGAGATATTTGCAGCAAATGGGGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGCCACTGGCAAAAGTTTGGTGTCTGGATGTGGAGGAGGGAGGCTCCCTATGGCTGGGGGAGGGATGCTGAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTCTCAGAGGGAGCCACAGTCCCAGTAGGAGAGGCCACAGAAGAGCCATGTCCTTGGGCAGCCAGAGCCCTCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGCACTGCCCTGGGCTTGAGGCAAATGGCAAGGGAGGCTCTGCGGCTGGGCTGGCAGGGGCCAGGCTCACCAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGAGGTGGCGGTCCTGGGGGGTGCCGTTCTTGGCTGACAGTTTCTGGATTTGGCCCTCCTTGATCAGTTCATT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCCGGGTTGACAATGTCTTCTTCCCCACCCAGCTGCTCGTACACCTCCAAGAGCTTGTGCATTTTCTCCTGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGACATGGGACTCAGGCACCAAAGGTCTGTGAGAGTGGCTGGTGACCTAGAGATGCACGGAGTCCTTCCCTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAACCGTGGCCCAGAATCCAGAGAGGGCAATGAGCTACTGACAAGGGTGGGAGGGAAAACAGAGTGATGTTTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTTGGGTATTGAAGGATGAATAGGAGTTCACCATGCAGAGCATAAAAACAACGATAAACAGGAACAGAGCTAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CATTGCTGTGAGCCATGTGCTGTTCTACATGATACATGTTTTAACTCACCTAGTGAGGTGAGTGCCATTGTTAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTCATTTTACAGACAAGGAAACTGAGGCACAGAGCGGTCAGTTGAGTATCTGAGACCCAGACTCGGACAATCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATATGTCACCTTCCCCTGACCATGGTGACTGGTGGGGTGGTCACATGGGTAACCAGCACCCAGAAGTGCGATGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACAGCGTCAAAGCTCATGCTTCAGCTCTGAGCCAGACGCCAGTGTAGCAGAACGCAGAGGTGAGCCTGCGGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCTCGACAACAGCCACATGTCTGAGTCTGTACCTGCTGTGCCTTGGAAGCCCCGTCCTTGGACCTGAGTGATC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCAGCCTGTACATCCTGGAGGCGGCTGGGTTTGGCTGACCCTTCCGTCTCTGGCACCAATGCAGAGTTCTTGGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGGTGCCCCTGCACCCTCCTGGGAGCCCTTGGCCCCAGCTCACTCTCCGCATCCTTCCGGTCTGGGGCGTCCTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CGGGAGCCTCTTCAGATAGTCCTTGAGCAGCAGCTCGTACCGGGGGACCCTCTGCACGGGCTCCAGCATGTGGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCTGCAGCGTCAGGTTCCCGCATACCTCCTGCTTCTGTGGGGACAGAGGGAGCATTGGGCACTCCAAGGACACG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGTGTGGATGCCAGCCCCACCGGCTTCTGGCCACCACAGCCCCAGGAAGCTGCCCGGAACTGGCTGCCCAGAAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGACTGTCCTTCAAGACATGGCTGACACAGACCACACTTTACAACGAGGGAAACTGAGGCTCAGAGAGACTGAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAATGGAGCAAGAACTGGAACCCCAGGCAGGCTGGCCCTTGGCCCAGAGCTGGCTCTCTTATACGCATCCTCGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGGAGAAAATAAATGCCTGGACAGGACTGTCTCCTCCTGTCAAGAGTGGCTTTTCCCCACTCTCACCCACCCGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGGCCTAAGCAGGGCTCCTTCGACCCCTCTGCTGAGAAATCAGGCAGAGCTTCGCCCAACCATCCCCACTGGGT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATCGGGCCAGGGCTTGTCCTTATGCCTAGAAGCAGCTCGGGGAGTCCTTCTGCAGATCGCTCTCGATATAAACG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CACCAGTATTCCAATCAGGTGCTGAGACCCTCGCGCTCCACGTGTACCCAGCTCTGCTCACCGGCTCCCTGTGC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTCCCCTCGCACCCTGCAGCACCTCCTTGCTGCCATGTCTCCATCTGGCATCTGAACCCCAGACACGTGTGCTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AATGCTGCCCACCTGTCGCCTCTGTGCTCCCCAATCGGGTCCTCCTGCCCAGGCCACTTTGCCTCTGCCTCCCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGATGATGCCCACTGGGCAGCCTGTGAGGGCCTGCTGACTTTGTCGTCCTGTCCACCAGCTTCCCCACCCACCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCCAGCAACTCAAGGGCCTCAACCACCCTCACCTGGCTCAGGGCCCAGAACAGAACGGCTTCCAGCTCAGATGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GCTCAAAAATGCCTGGGATACAACAGGGTGAGAGAAACCCAAGTCGACAATCTTCATAAAAACAACTGTTTCTG 2442
Query 1 ----------------------------------------------------------ATGGAGTCTTGCTCTG 16
|.|||||||.||||||
Sbjct 2443 TCAAGATATTCACATAATCTCCAAGTATCTCCCTACAAGAAACTTTTTTTTTTTTGAGACGGAGTCTCGCTCTG 2516
Query 17 TCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCC 90
|..||..|||||||||||||||||||||||||..||||||||||||||.||.|.||||||||||||.|||||||
Sbjct 2517 TTGCCTGGGCTGGAGTGCAATGGCGCGATCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCAATTCTCC 2590
Query 91 TGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGTATTTTTAGTAG 164
||.|||||||||||.||||.||||||||||||||||.||||||||||.||||||||||||||||||||||||||
Sbjct 2591 TGCCTCAGCCTCCTAAGTAACTGGGATTACAGGTGCACACCACCACACCTGGCTAATTTTTGTATTTTTAGTAG 2664
Query 165 AGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCC 238
|||..||||||.||.|||||||.|||.||||||||||||||||||||| .|||.||.||||.|||.||..|||
Sbjct 2665 AGATGGGGTTTCACTATATTGGTCAGGCTGGTCTCGAACTCCTGACCT--TGTGATCTGCCTACCTCGGTCTCC 2736
Query 239 CAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA----TT-------------------------- 282
|||||||||.||||||.|.|.||||||||..||||||||||| ||
Sbjct 2737 CAAAGTGCTAGGATTACAAGCGTGAGCCATCGCGCCTGGCCAAAACTTTTTTTTTTTTTTTGATGGAGTCTTGC 2810
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2811 TCTGTTGCCCAGCCTGGAGTGTAGTGGAGTGATCTTGGCTCACTACAGCCTCCGCCTCCCCGGCTCAAGCAATT 2884
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2885 CTGTCTCAGCCTCCCAAGTAGCTGGGATTACAGGTATGAGTGTGCCACCACACCCAGCTAATTTTTGTATTTTT 2958
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2959 AGTAGAGATAGGGTTTCACTATGTTGCCCAGACTGGTCTCGCACTTCTGACCTCAGGTGATCCGCCCACCTGGG 3032
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3033 CCTCCCAAAGTGCTGGGATTAGAGGCGTGAGCTACCACAAGCGGCCAAGAAACTTAATAGGGGAAAAAACCCAA 3106
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3107 CTTCACCTGAAGAGTCCTGACAGACACGCCCTTTATCAAGTGAATATCCCCAGGAATGGGATGCAGAGACTGCG 3180
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3181 TCACCGGGCAGGACGCAGGGAGAAGAGCACAGCCTCACTCCAGGAAAAGGCACAGCCTCAATCAAACTGTGGAC 3254
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3255 AAACAGCAGAAAAACCCAAGCAGGCAGTCTACAAGTAACTAGGCTGCACCCCTCAAAAAGACAAGGACAGAGGC 3328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3329 CTGTTCCAGACCCAAGAGGACAAATACAATAATGAGCGCAATGTGTGGCCCTGGGTTGGGTTATGGATCAGAAA 3402
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3403 ACAAGAATGTTATTGGGACAATCGGTGACATCTGAGTGTGGGCTGCGGAGTAGATAGCACCAGGACATCAGTGT 3476
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3477 AAAATCCCCGATTTTGATCACTGTGCTGGGAGTACGCAAGAGAATATCCTTGTTCACATGTTTAGTGATAAAGG 3550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3551 GTTACGGTGTCTGCAACTTAGTTTCAAAACGCTCAAAAGTCATCATCATCTGTATGAGTTTAGAGGGAATAATA 3624
Query 283 --------------------- 282
Sbjct 3625 AAGTAAGCCAGACAAAATGTT 3645
