Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_136212.1
- Aligned Length:
- 3439
- Identities:
- 243
- Gaps:
- 3166
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAAGTCGGCGGCGGTGGCGGAGGCGGTGAGTGCGCGGCTCCGGGGCTGGCCGACTCCGCTAGTGGCCCGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCTGGGCTCGGGGGCTCCGGGCTCTGGGCTCTGGGTGCGCGGACCGGGCCAGGCTGCTTGAAGACCTCGCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACAGCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTGCATGGCCCGCTGATTGCTCCTCACAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGCCAGCCTCCTGGATGTGCTCAACAATGAAGAGGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGCCCTGCCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCAGCATCCCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTTTATGCCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATACACCTGAGCCCACTCTTGCACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGCACACACATGCAAGCCATATACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CACACATGCACAGTTGCACAGACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCACCTCTCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CGGCCCCTCCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGACAGCCACATTTGGAATTGGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAG 1628
Query 1 ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAG 74
|.|||||||||||||||||||||||||||||||||.||||.|||||||..||||||||||||||.||.|.|||.
Sbjct 1629 ACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAA 1702
Query 75 GTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAG----GTGCCCACCA---CCACAGCTG 141
||||||||.|||||||||.|.|||||||||||.||||||||||||||| ||| |||||| |||
Sbjct 1703 GTTCAAGCAATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATTACAGGCGTGTG-CCACCATGCCCA------ 1769
Query 142 GCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAG 215
||||||||||||.||||||||||||||.||||||.|||||.||||.|||.|||||||.|||||||||||.| |
Sbjct 1770 GCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGT--G 1841
Query 216 GTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGG---------CCA 280
|||.|||.|||||||.|||.|||||||||||||||||||.|||.|||||||||..||||||| |||
Sbjct 1842 GTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCA 1915
Query 281 TT------------------------------------------------------------------------ 282
.|
Sbjct 1916 CTCTCATAACAGAAGTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAG 1989
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1990 ACAATCCTGTGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCA 2063
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2064 TGCCTCTGGCAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAA 2137
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2138 TCTGTACCTGAATGTGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAGCGCATTTCGAGGCCTTTCCCTTG 2211
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2212 TATGCAGGGTGCCAGTGGGAGCTGCTATGTCTCCTGTGCAGCCAGACACCCTGGACGAGGCCCTTCCCACCTCC 2285
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2286 CCCTTTCCTCACGGCTTCTTCAGCACCACATGTGGATGCCTGTGGGTCAGTCCATCTGTCCATGGGCAGGGGCC 2359
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2360 GCTGTGAGAGACCCCATGCGCGTGGGATGTGGTAGATGCTGATTATGGGGCCAGCCACCCATACAGGTCTATCA 2433
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2434 GGTCGCAATGGAGGCCCCACTGGAGCGGGAGGCAGGCTGGCCTGGACTTCTGTTGGATGATGGGGGCCAGGGGA 2507
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2508 TGGTAGGAGGGGCAGGAGAGCAGGTCTGCATCTGTCTCAGCCCCAGGAGCTCCTGGTTTGGGGCCAGCTCTAAG 2581
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2582 GAGCTTCATCCCTGAGCCTGGCCGAGTATAAGGGGGTCCCGGATATCCAATGCTGAGACCTAGACTTTTCTAAG 2655
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2656 CCTCTGCACCCAACCCCTAACTTGGCCTTTTCAGACCCATGAGAGTGCAGGGTGGGTGTGGACCTGCGCCAGGG 2729
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2730 CTTCCCAGCCTGATTGTGACATGATGTGAGTCCACCTAGGGAGGAGCAGGGGCCTCCCCGTCTCTTCCCCTTCT 2803
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2804 TGCCCAGACCACTTTGCTGGGCTCAGAGCCTTCCATGGCTCACTTTGAACTCAGAAGAGTTTCCCAGCTGCGAC 2877
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2878 CCAGGCTGCACCCCCAGGCCTGAGGAGAAACTGAGGCCCCACATCCCATACGTGTCCTCTGAGTCAGGACAACA 2951
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2952 GGCTCCCGGCTGGGGGCACTGCCCTTGCTGCCAACACATTCACCTGCCCCAGTGGCTACCATGTCCTGTGCCGG 3025
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3026 TGACCAGTGCCAGTCCCCAACCTGGATGGTGCCCTGCCCTCATGAAGAGCCCCCCGGATGTTCACCTCTGCCCA 3099
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3100 GAGACCCGGCCTGCCCAGGAAGAGCAGTCTCTGCTCTTGTGTGGGTCCCTCTGCCCCCACCCTGCCCAGGGCTC 3173
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3174 CCCAGCAGCCTGAGGCCCCTAAGGAAGAACAGCCCTCAATGGTGATTCTATTGGTGTTATGAGTTGTGTCCCCA 3247
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3248 AAGAGATATATCAGTGTCCTGACCCACAGTACCTCAGAATGTGACTGCATTTGGAGATAGGGTTCTTCCAGGGG 3321
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3322 TAACCAAGGTAGAATGAGGTCGTTAGTGTGGGCCCTAATCCAATATGACGGCTATCCTTATAAAAAGAGGAACA 3395
Query 283 ----------------------------------- 282
Sbjct 3396 TTTAGGCTGGATACAGTGGCTCATGCCTATAATCC 3430
