Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_136513.2
- Aligned Length:
- 2570
- Identities:
- 242
- Gaps:
- 2297
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCTGGGGGCCGCAGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACTCTGAACCCCAAGCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGATCTCTAATAGTGACTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAGGTCTTTCCTCAAACTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTGGGAAGGTTTGCCAGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAGTAGTTCCTGAGACCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGCAGATATAGATGGTGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATGCTGAATTTTGTTGGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTATGGTGAGTCATTACTCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTTTTGAAAGGCTTTTGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACCATAAGGAATGTGGGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGCATAAATGTAATAACTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAGACCTTCACCCAGAAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCTTGCTTCAGCATTGGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGTTGGAACTTGGGAAAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTGTATAGACAGAGATCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGCAAGTTGTATGGGGAAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCAAGAAAAGGAAATGTTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAATAAGTTGCATCTCTGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTTCATGCCTGCTCTAGTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGTTTGTTGTAAATATATA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAATCACATATATCATGTTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTGAGACTACCTTTATATT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTTCTTTATTTTCTTTATT 1776
Query 1 --------ATGGAGTCTTGCT-CTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCT 65
||||||||||||| |||||.|||||||||||||||||||||.|||||||..||||||||||||||.
Sbjct 1777 TTTTTGAGATGGAGTCTTGCTCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCC 1850
Query 66 GCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGG----TGCCCACCA--- 132
||.|.|||||||||||.||||||||||||||||.||||.||||||||||||||||||| || ||||||
Sbjct 1851 GCCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGGCACTTG-CCACCATTC 1923
Query 133 CCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCC 206
||| |||||||||||||||||||||||||||.||||||.|||||.||||||||.|||||||||||||||
Sbjct 1924 CCA------GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 1991
Query 207 TGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA 280
|||||| .|||.||.|||..|||||||.|||||||||.|.|||||||.|||..||||||||...|||.|||..
Sbjct 1992 TGACCT--TGTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACCATGCCCGGCTG 2063
Query 281 TT------------------------------------------------------------------------ 282
||
Sbjct 2064 TTTTTTTAAGATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTTTTCTTATAGAT 2137
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2138 AACACATAATAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACCTGTAGGAAAGA 2211
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2212 ATCTTTAGAAGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAAGGCTTATATAT 2285
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2286 TTTATAGTAGGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGAATTCTAGGTGT 2359
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2360 CCCTCTGCTGTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAAGATGGACTGTG 2433
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2434 TTCTGTAAAAAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTATATAAAATGAT 2507
Query 283 ------------------------------------------------------ 282
Sbjct 2508 TTCTTAATATTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGA 2561
