Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_137328.1
- Aligned Length:
- 5596
- Identities:
- 242
- Gaps:
- 5320
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGCGGCGCGGGACGGCGGGCGCCGGCGCCGCAGATCAGCCAGTAGACATGATGAGCATCAAAGCCTTTACGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGTCTCTGCTGTGGAGCGGGAGCTGCTGATGGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGGAGTGCTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCAGGGACCTCTACGTGGGCACCAACGACTGCTTCGTCTACCACTTCCTGTTGGAGGAGAGGCCAGTGCCTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGGCCAGCCACGTTCACTGCCACCAAACAGCTGCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACGAGCTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGCGGCCTCAGCACTCAACAGGCTGCTGGTGCTGTGTGACAACTCCATCAGCCTGGTCAACATGCTGAACCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGCCAGTGCCTTCGGGGGCCCGCATCAAGGGGGCAGCCACGTTTGCACTGAACGAGAACCCTGTGAGTGGGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCCTTCTGTGTAGAAGTTTGCATCATCTCTGTCAAACGCAGAACCATCCAGATGTTTCTGGTGTACGAGGACC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGTGCAGATCGTCAAGGAGGTGTCGACTGCCGAGCAGCCCCTCGCTGTGGCTGTGGACGGCCACTTCCTGTGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGGCTCTGACCACTCAGTACATCATCCACAATTACAGCACAGGCGTCTCCCAGGACCTGTTTCCCTACTGCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGAGGAGAGGCCGCCGATCGTCAAGAGGATAGGGAGACAGGAGTTCCTGCTGGCGGGCCCCGGAGGGCTGGGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGTTTGCCACAGTCGCAGGGATATCCCAGCGCGCCCCCGTGCACTGGTCGGAGAATGTGATTGGGGCGGCTGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCTTTCCATACGTCATAGCGCTCGATGACGAATTCATCACAGTCCACAGCATGTTGGATCAGCAACAGAAGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACGCTGCCCTTTAAGGAGGGCCATATCCTACAGGACTTTGAAGGAAGAGTGATCGTTGCCACAAGTAAAGGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTTACATCTTGGTTCCATTACCTTTGGAAAAACAAATACAGGATCTTCTAGCAAGCCGCAGAGTAGAAGAGGCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGGTTTTAGCAAAAGGAGCCCGGAGGAACATTCCAAAGGAAAAATTTCAGGTAATGTACAGAAGGATTCTGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCAGGCGGGATTTATACAGTTTGCACAACTTCAGTTCCTGGAAGCTAAAGAGCTCTTCAGAAGCGGCCAGCTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATGTCCGGGAGCTGATCTCTCTCTACCCCTTCCTGTTGCCCACCTCCTCCTCCTTCACCCGGTCCCACCCTCCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTTCATGAGTACGCAGACCTGAACCAGCTGACCCAGGGGGACCAGGAGAAGATGGCCAAGTGCAAACGCTTCCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CATGAGCTACCTGAACGAGGTCCGCAGCACAGAGGTAGCAAATGGCTACAAGGAGGACATCGACACAGCCTTGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCAAACTGTATGCAGAGGCTGACCACGACAGCCTGCTGGACCTCCTGGTCACTGAGAACTTCTGTCTTCTGACG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GACAGTGCTGCCTGGCTAGAGAAGCACAAAAAGTATTTTGCACTTGGACTGCTCTATCATTATAATAACCAAGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGCTGCTGCAGTTCAGTTGTGGGTGAACATTGTGAATGGCGATGTCCAGGACTCCACACGCTCAGACCTGTATG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AATACATCGTGGATTTTCTTACCTACTGCTTAGACGAGGAACTAGTGTGGGCCTATGCTGATTGGGTCCTGCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAAAGTGAAGAGGTCGGAGTTCAGGTTTTCACCAAGAGACCTTTGGATGAACAGCAGAAGAACAGTTTTAATCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGACGACATTATCAATTGCCTTAAAAAATACCCTAAAGCCCTTGTGAAGTATCTGGAACATCTTGTGATAGACA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGAGACTGCAGAAAGAAGAGTATCACACCCACTTAGCTGTGCTGTACCTGGAAGAGGTGCTGCTGCAGAGGGCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCCGCCAGTGGCAAGGGTGCAGAGGCCACCGAGACGCAGGCCAAGCTGCGGCGGCTGCTCCAGAAATCTGATTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATACCGAGTCCACTTTCTTCTCGAGAGGCTGCAGGGAGCTGGCCTGCCCATGGAGAGCGCCATCCTGCACGGGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGCTGGGCGAGCATGAGAAGGCGCTGCATATCCTGGTGCACGAGCTGCAGGACTTTGCAGCGGCCGAGGACTAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGCCTGTGGTGCTCCGAGGGCCGAGACCCACCCCACCGCCAGCAACTCTTTCACACGCTGCTGGCCATCTACCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCATGCTGGCCCCACTGCCCACGAGCTGGCCGTGGCTGCCGTGGACCTGCTGAACCGCCACGCCACCGAATTTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ATGCAGCCCAGGTGCTGCAGATGCTGCCTGACACCTGGTCAGTGCAGCTCCTCTGCCCATTCCTGATGGGGGCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATGAGGGACAGCATCCATGCCAGGAGGACCATGCAGGTGGCTCTCGGCCTGGCCAGGTCCGAAAACTTAATCTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CACCTACGATAAGATGAAGTTGAAAGGAAGCTCAATCCAACTCTCAGACAAAAAGCTTTGTCAGATATGCCAAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATCCCTTTTGTGAGCCTGTGTTTGTTAGATACCCAAATGGTGGTCTTGTGCACACCCACTGTGCCGCCAGCAGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CACACAAACCCCAGCTCATCCAGTCCTGGCACTCGGACTTGAAAAGCTTGGCCCAAGGGTGCGAGGGGAACTCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAGTTCTTTCTGAGCCTGCTGGACATGAAGAGCAGATGACCACCATGCTCTGTGTCAGCCAGGACGAAGGGAGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CATCTGGGTGCCAGGGAGCCTTCCGTCCATACGCAACAAGGACTCCTCGCTGCTGACCAGGCTCTATGAATGTA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CATGGAAAACCCCTAAAAATCCCCAAAACAGAAACATACAAGAGTTCACCTGTCCAGGTACATAGTAATCCAAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ACAGAGGTCTACTTTGAAAAAAAAAAAAAGGGAGTCTTCCTCATGCAGTCCAGACCCAGGTGGGGGATCCCCCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCACCCCCACACTCCAACCTTTAGACTCATGTTTGCACTGGAAACGTGGCTTCACCATGGCTGGCGACAAAGTC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTCTCTTGCCTGGGTGAGTGGCGAGGGCACAGAGCCTCATGGGGGTCAGCCTTGCCCTCCTGCAGAAACACGTT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTCCATCCACGCCGCTCACTCATGGGCCCATTTCCCAGGGTTACCTCGTGGGCTCTGCCTTTGCCCTCAGAAAC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GGCTGACCCTGGAGAAGTACCTTTGTTCCTTCTTTCTTCCTCTCCGGCTCTCAGCTCCCAAAAGATTCTGCCTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GTGTACCCAAGCACTCACTCTTGGGTGAACTAATGCTTCTGGCTGCCTAGCAAGTGAAGATCTGTTGAGAAACT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GAGAACGCTCCAAGAGAGAAGCTGCTCTCCCCTCCTTGAAGAAGCCGCGGACACGGGAAACCCACGGCGGGCAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GGGCCCAGCTGTGTGCTCCTTTCCTGTCATGGCATCTGCTGATTTGAAACTCCATGACGAACACGTTGAACTAA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ACATTTTTATTTAAATTTGTATCATGTTCGTAGTTGCTCTCTTGTTGAGAGAGTCATCTGTCCTGTTTGTTAGG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GGTATTTTTTCTTGTTAAAATGTATCTCCTGTTGAATACTCGGGAAATTCAAAGGGAAGTGTGGTCAGCACACA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CTGAGCGTTCTTTTCTGGAGAGGCCGGTTTTAGCCTCGTACCTTTAGCAGGACCGACAGCGGGTGGAAGGGCCC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GTGTGCTGGATGGGGGTGTCGCCTCCTGGATGGCACACCCTCCCGAGGACATCCAGACAGGCTGTGTCACCCTC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CAGCACTTTATGTGCCTGCTCTGAGGTGTCCTGAACACACAGCAACGGCCTCTCCTTCATCACAGGCCGGGGAT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TCCTTTTGTGTTTCTGTATAACATCGATGACGAGCTGAAGCTGTTGTCACTTCACTGCCCTCTTTGGAATTTCT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TCATTGTGCTGACTGATTCTATTAGGGGCTAACAATAAAGGCAGTCTACCCACTACTATCATGCTTGGGAAACA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 AGCGTCAGCTTGTACATATGACAAGAGAGGACCCTGAATACACCCTCTCTTCATCAGCCCAAGCCTTACTGAGG 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TGGGATGAAGACCTCATTCTCTGTTCTTTAAAACATGTTTCGTGAACTAATATTGGTCCATGTATTTTTTGTCC 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TTTTGGGACTCTAAGTGGGTCAAGAAGCAAAAACATCCATGTGTTGTTTGGGGGGAATTGGCACCATTTTTTCC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TGACTATGTTTCAATTAACTAAAGAATAAATGATGAAGAAATTCTCCTTGTAGCACAACTGTATGCTGTGTAAA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 TTGGTGTGAGCTCAAAGCCCAGTCATGTGTTTTACCTGTGGGTGACTCTGTTGTAGAATGGTCATATTACTGCA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TATGTTATCATGACAACTTGTGAGTTTGAGTTTATATTTCTCAAAGAACAAGTTACCCGTATATGCAACATTGC 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GCCATTAAAAGCTTATTTCTCTGTACACAAAATGGGTAAAATCTTGAAAAAACTTAGTAATTTCTCATTCCTAA 4514
Query 1 -------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGC 67
|..||||||..||||||||||||||||||||||||.||||||.|||||..||||||||||||||..|
Sbjct 4515 CACACAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAACCTCCAC 4588
Query 68 GTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGC---CCACCAC-CACA 137
.|.|..|||||||||||||||.|||.||||||||||.||||||||||||.||||||||| ||||||| |.||
Sbjct 4589 CTCCTGGGTTCAAGCGATTCTGCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCATGCCACCACGCCCA 4662
Query 138 GCTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACC 211
|||||||||||||||||||||||||||.||||||.|||||.||||||||..||||||||..|||||||||
Sbjct 4663 ----GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGGTCTCCTGACC 4732
Query 212 TCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGC----------CT 275
|| |||.||.||||||||.|||.|||||||||||||||||||.|||.|||||||||||||| ||
Sbjct 4733 TC--GTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCAGCCAACACT 4804
Query 276 GGCCATT------------------------------------------------------------------- 282
.|.||||
Sbjct 4805 AGTCATTTTTATTTTTTCACTGAACATTGATCAATACTCTAAAATGTTTGTCATCCTTTAGAATAATGGGAATT 4878
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4879 AAAGTTGAGCAGTTTTCCATCTCTACCAAATCCTTCACCACAAGCAGCATTCTATTACAGTATGAAGAATTGTC 4952
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4953 TCATATGTTAAAACTGTACTTTTCTCTAACCTTTCTCTCACTCCTACAAGGCCCTTTTCTCAAATCATATTTCT 5026
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5027 GAGAGAAATGTATGGTTCTTTCTCACAGGCCTGCTGATTTGTAACTGTGCCATCGAATAGAGCAATTAGATCCA 5100
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5101 TCAGACCTTTTTCCCCTCATTAGGTTCAGTGGAACCATTCTGGTTAAAACAGCATGAACTGAACTCAGTTTACA 5174
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5175 TTCATATTCTATGGGCAATACCATTTGGTTTTTGGAACTGTTTATCTGCTGTTCCCTATCAAGTATTAATGTAG 5248
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5249 GGATGTCACTCAGGCTGCGTTGCACTGGGCTGAGTTCAACTGCGACGCTCTCACTGACGCGTGCTTACATGTGC 5322
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5323 TTCTCACTTCCGGAGCACAGGCAGGTGGCTGCGGGGTCCCAGCTCTGAATGGATGCCCATGATGCAACTGGGGC 5396
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5397 AGCCCTTGCTTTTTGCTTGCTCTCCCACAGAAACCTTTGTCCTTGCAACTTTATCCTTTGTCCCGATTGGGTCC 5470
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5471 CAGATACACAAAATGTACAAATGTAAACTTGCTCATTTTATTAAAATTCTTTTAGTTCTTTGTTCTTTCTGTAA 5544
Query 283 ---------------------------------------------- 282
Sbjct 5545 TTTTTTAAAATAAAAATTGCCTTGATGGAAAAAAAAAAAAAAAAAA 5590
