Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- NR_152444.1
- Aligned Length:
- 2391
- Identities:
- 245
- Gaps:
- 2111
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TATTTAAAGGGGAAAGAGGCCGCGGCGCCGGCCCCAGGACCCGACCCGGCCCCAGGAGAGTGTGCTCGTTCTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCACGGAGCTGGCCGCGTTAGCGACGTCCTCGAGTCCGCGGCGGGCACGATGCAGCTCTTGTGCTCTACTGTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAGATCAAGGACATTGGCCACCTGACCCGTTGCACGTTGTAACCGAGGAACTCGGAAGCTACAGCCGAAGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTGGGAGCTGCAGCCTCGCGGGGGCTGATGTCAAGACTACTCTCTCTCAGATCCCAGGATTGGCATGTGATGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGAGATGAGCCGAAGGCAGGAGGGAACGCCCTGGGAGGTGTTGATGCTGAGTTGGGGAGGCTCCTAGACGAAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCGCCCCCATCTACTGACTGTGCCAGTCTTACATTTTCAGGATGGAGTGGCCAAGGGATGATATAAACAAAGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACGTTACCGTGGGAAGAAGACAGACTGTTTTCTTAGCTGGGACGTTGGCTTTTGTCCAGGGTGGCTCTGGTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGGGAGCAACAGGTCCCATTTTAGCAATTCTTTGTCAATGGTTTGAATTTTTTTTTTTTTTAAGATGGAACGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGAGAAGAGGCTAATTTTCGCGTCATGTTAATCTCACTTCTCTGGCATGTAAGGGTGCTGGTATGCCTGCTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTCCCCACTCCCAGTTCTGTGTTCCAGAAATTGAGATGGCTCCCTGCCTGTGACTATGATTAGGAGCCTTGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATTTCAGAATCTCCCTTCAACCTGCTAGGGCAGGTATCAGAAATTCCAAAGGGCATTTATGTGAGGCACCTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTAGAGCCTATCAAAGTAGGAAGGGAGAGCCATTTGAAAGGCATCATATTTCAAACTTTTGCTATTATCTGTGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TATCTTTACAGTCACGGGAACACACTAGCGCTACTGAAAAGATACTTATACAATTTTAAGTGTCTTTAAAATTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTGTCCCATAATGGGACATCACCTGTTGTATATATGCCATGTATTCTATTTTAGAATCCTGTATCTTATGACCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAAAGTCATAGTCAAGGACCAGCAGTGTTGGTGTACTGTCAACGGAAGTGCACAGTCTCACTCTAGGATCCCAC 1110
Query 1 -------------------------------------------------------------ATGGAGTCTTGCT 13
| ||||||..||
Sbjct 1111 TCCAGACTTCCTGAATCAGACTCTGGCAGGGTTTTTTGTTTTTTTGTTTTTGTTTTGAGCCA--GAGTCTCACT 1182
Query 14 CTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTC 87
.||||.||||||||||||||||.|||||.||||||..|||||||||.||||.||.|.|||||||||||||||||
Sbjct 1183 GTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAGCCTCCGCCTCCCAGGTTCAAGCGATTC 1256
Query 88 TCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGTATTTTTAG 161
|||||.||||.|||||.|||||||||||||||||||.|||..||||||||.|||||||||||||||||||||||
Sbjct 1257 TCCTGCCTCATCCTCCGGAGTAGCTGGGATTACAGGCGCCTGCCACCACACCTGGCTAATTTTTGTATTTTTAG 1330
Query 162 TAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTC-GAACTCCTGACCTCAGGTGGT-CCGCCTGCCTTGG 233
||||||..||||||..||||.||.|.|||.|||||||| .||||||||||||||||||.| .||||..||||||
Sbjct 1331 TAGAGATGGGGTTTCGCCATGTTTGTCAGGCTGGTCTCAAAACTCCTGACCTCAGGTGATGGCGCCCACCTTGG 1404
Query 234 CTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGC----------CATT--------------- 282
|.|||||||||||||||||||||||||||||||||.|||||.||| ||||
Sbjct 1405 CCTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACCGCGCCGGGCCAGACTCTGGCATTTTAACAATCCCAGGT 1478
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1479 GATGTGTGTGCATGTGAAAATTTAAGTACCATTGGTCTAGATCCTACACTCTTTAGGATATCACCATCTGTAGG 1552
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1553 TAGAATATTTAAAGCATAATAGGTATGACTGATAGATTATTTTATCCAAAGTTCTTTTTTTTTTTTTTTGAGAT 1626
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1627 GGAGTCTTGCTCTGTTGCCCAGACTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCTGCCTCCTGGGT 1700
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1701 TCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGGCTACAGGCACCCACCACCACGCCTGGCTAATTTT 1774
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1775 TTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGC 1848
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1849 CTGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACCACGCCCGGCCCCAAAGTTCTAAAGTAACA 1922
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1923 TTCTATTGCTAAAGAAATCCTAACCTACTATGTAACATTTTTCTCTTAGTTAAAAATGTGAACTTATTATTAAC 1996
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1997 CTCAATTTTTTAGAGGCCTCCAATCTTTTTAAAATATAAATATTTTTGATTGACAAATCATAATTATACACTTA 2070
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2071 TGGGGGTATAAACCTCAATTTTTGTAACCCTATTTTGGCATTTTCCTGTCCTTACATCTCAGCTTAAATGCTCC 2144
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2145 CTCTTTTGGGAGGCCTTTTTCTGCCTTCAACATAGTAGAGCCTTTTCCCCCACCCCTCTGTAACATAATGCCCT 2218
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2219 GTTTTATTTTTACTGCTTTTATTTTCATGCTTTGTGGGTGTCCCCACTGGAGTGTAAGCCCTATGGGAGCAAGG 2292
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2293 GCTGACCTGTGACTGTTTTATCTCCAGGGCCAACAGCAGTGTTACTGTATAGTATGTACTCAATAAATATTTGT 2366
Query 283 ----------------------- 282
Sbjct 2367 TGGCTTTATCTCTTATTTTTTAA 2389
