Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13787
- Subject:
- NR_163262.1
- Aligned Length:
- 2841
- Identities:
- 170
- Gaps:
- 2651
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTGTCCTGGCAGAGCGGCGAGCCGGTGAGTGTGGCTGCGGGGTCGCGCCCACCCTCTACCTGTGCCGGGGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAACCTGGCCCCGGGGAGGGCGCGGCCTCGGGGAGACGGCGTGCAGGCCCAGCACTGTTGGTCACCGCAGGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTCTTCCTATTCACCGTGGGCAGCAGAGGGATGGCTGCTCAGCTGCTGACTGATGAGGCACTGGAATCAGTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGTTCAGGGATGTGACTGTGGACTTCACCCAGGAGGAGTGGCAGCAGCTGGAGCCTGCCCAGAAGGACCTGTAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGGATGTCATGCTGGAGAACTACAGGAACCTGGTCTCACTGGTCCTCAGGTTCTGAATCTTGTGCCTGGAGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCAGAGAGGACCCTGGAGCAGGAGGAGAAAGAGAAGCTTGTCTCAGAAGCTCCACCTCCTCCTGGGGCAATGCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGTCTCAGGCCTGAGCAGACACGGGGGCTGCTGGAGCCTGAGAGGACCAAGACTCTGCTGCCTCGGGAGAGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGCCTGGGAGAAGCCTCCTCATCCCGCCTGCACCAAAGACTGGGAGGCTGTGGAGGTTGGGGCCTCCAGCCAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GACAGTGATGAGAAAGACCTGTCTTCTCAAGAGACTGGGCTTTCCCAGGAGTGGAGCTCGGTGGAGGAAGATGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGAATCAGAGGGCTCCCAGGGCTTTGTGGAGTGGTCAAAAGCTCCACAACAAACAACCATAGTCTTGGTAGTGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCGTGCTTTTTTTGTTCCTGGTTTTAACGGGGATGCCTATGATGTTTCACATTTAACTATAATGGTGGCTGTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTTTAAAAGTTTAATTTAATGAAATAGATGCCCTATGTCATGTTAAGGAATTGTGCTAGTTAAAAATCAGGAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGGTGTTGAATATTTTCAAATGCCTTTCAAACATCCTTTGAGATGATTTTTAAAAAATTTTTGGTGTGAGTTTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CACATACTTTATTTCCATGAAATGAAGACATCATTGATTGTAAAACATTATTTTGTATACCACGGAGAAAGAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTGCTAATTAATCATTAAGATGCCACCAACTGGAAGATATCTCCTGACTTTGAGAAGATGAAAAAATGTGCAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTGAAGATCAATGAAATCTGGTACATTTCCTAACATCAAACCAACTTTGCATTCTTAAGGTTTTGGTGCACCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCTTTTCATACACTAGATTATATTTATTGATATTTTATGTAGGATTCTTGCCTCTATCTTCACATGTGAGATTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTGCTATCTTTGTGAAGTTTTGGTATCATGGTTAAGCTTGCATCATAGAAAGACTTGGGTAACTTTTACCTTTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTATGCTTTTCAATAGTTTCTGTAGCTTAGGAAGTATCAGTCCCTTGACACCTTACATGAATTCATTGTTATAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCAGGTCATAGAGTCATGGAGAGAACGTTTCAGCTAATTCTTGGGCAGCTTTCTTAGTTCTTTACAATGTTATC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGTTTATTAATACTTTTTACCTCTTGCATTTATTTTGGCGAATTACAGAGGTTTTTGTTTTTTTTTTTTTTTGA 1554
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 1555 GACCGAGTCTCACTCTGTCACCCAGTCTGGAGTGCAGTGGCGCCATCTCGGCTCACTGTAAGCAGAGGGTTCAT 1628
Query 3 G----------GCCT---CCTCCCAAGTAGCTGGGATTACAGGTGCGTGCCACCACGCTGGGCCGA------TT 57
| |||| ||||||||||||||||||.||||||.|| |||||||..| |||.| ||
Sbjct 1629 GCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGC---CCACCACCAT--GCCCAGCTAATTT 1697
Query 58 TTTGTGTTTTCGGTAGAGACGGGGTTTCACTGTGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCC 131
|||||.||||..||||||||||||||||||.|||||.||||||.||||||.||.||||||||||| |||||||
Sbjct 1698 TTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC--GTGATCC 1769
Query 132 TCCCACCTTGGCCTCCCAAGGTGCTGGGATTGCAGGCGTGAGCCACCGTGCCCGGCCTCAGAGTAGTTCT---- 201
.|||.||||||||||||||.|||||||||||.|||..||||||||||||||||.||| ||| ||||||
Sbjct 1770 GCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGATGTGAGCCACCGTGCCCAGCC-CAG---AGTTCTTTTA 1839
Query 202 -------------------------------------------------------------------------- 201
Sbjct 1840 TCCTCTAGAAAATTCTTCATTCCATAGAGCTTTTTCATATTATTAGCTTAATTATGCATAATGTTTTATAATTA 1913
Query 202 -------------------------------------------------------------------------- 201
Sbjct 1914 AAAATTTCTCTTTATTTTGTTCTATCCCCTGTTTCCTGTAAACTGCTGTTTGTGGTTTACTCGTTATTAGATTT 1987
Query 202 -------------------------------------------------------------------------- 201
Sbjct 1988 GTCAAAGGTTTATCTAGCTTACTATTGTTTTTCCAAAGAACCAACATTAGGATTCATTTATATCCATTATTTCT 2061
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2062 TTTATTTGTAATTTGTTTTTCTTTGATATGTATTGCATTTATTTTTTATTGTTTTTCTTCTTTGTCTCAGTTTT 2135
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2136 TATACTGAATACTTGATTTATATTCTCTTTATATTTTCTATAATAGCATACTTATTAACGCAAATGTACTTCTG 2209
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2210 GATATAGCGTTGGCCACATCTTAACATTTGATTATTCATTTTTGTTTATGTTGTCTAAAAATTACATTGTAGTG 2283
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2284 TGTCTAAATATTACATTGTAGTGTTTCTAAAGAGTGCTTTGAAACTCAGTGATTTGGTTTATTTTTTGTTTAAA 2357
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2358 AATAGTTTTGTTTTCTTGTTTTACTGCACTGTGAACACAGAATGTGGCCTATAACACATCTGCTTCCAAAACTT 2431
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2432 TTTAAAAAGCTTTTAGTGTGGCCTAGAACATGTCCATTTTTTGTAATTGTTTCACGAACATTTAAGATGAAGAT 2505
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2506 ATCTTCTCTGTCTGTAGAACTGAAAACTTTATGTGCCTGTTAGTTAACTCAGTATCGTCAATTATATTGTTCAG 2579
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2580 ATTCATGTGTTATCTAATTTTGGCCTATTATATTCATTAAAAACCAATAAGGTTATGTGAAACTTTGTTAGTAC 2653
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2654 AATTGTTTTTGCTAATAAATTTTTATAATCTTTGCTTTATGTACTCAACAGCTGTGTAATTCGAGGCATATAAG 2727
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2728 TGCAGCATTGTTATGTCCTTGTTAATTAAATAATATATGTAAAACACCATATGACAATGGCTGGCAGATAGTAG 2801
Query 202 ----------------------------- 201
Sbjct 2802 GCACTCAATAAATGTTAATTAAAACCTGA 2830
