Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13787
- Subject:
- NR_163263.1
- Aligned Length:
- 2714
- Identities:
- 170
- Gaps:
- 2524
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTGTCCTGGCAGAGCGGCGAGCCGGTGAGTGTGGCTGCGGGGTCGCGCCCACCCTCTACCTGTGCCGGGGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAACCTGGCCCCGGGGAGGGCGCGGCCTCGGGGAGACGGCGTGCAGGCCCAGCACTGTTGGTCACCGCAGGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTCTTCCTATTCACCGTGGGCAGCAGAGGGATGGCTGCTCAGCTGCTGACTGATGAGGCACTGTCCTCAGGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGAATCTTGTGCCTGGAGAACCAGAGAGGACCCTGGAGCAGGAGGAGAAAGAGAAGCTTGTCTCAGAAGCTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACCTCCTCCTGGGGCAATGCAGAGTCTCAGGCCTGAGCAGACACGGGGGCTGCTGGAGCCTGAGAGGACCAAGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCTGCTGCCTCGGGAGAGCCGGGCCTGGGAGAAGCCTCCTCATCCCGCCTGCACCAAAGACTGGGAGGCTGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGGTTGGGGCCTCCAGCCATGACAGTGATGAGAAAGACCTGTCTTCTCAAGAGACTGGGCTTTCCCAGGAGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGCTCGGTGGAGGAAGATGACGAATCAGAGGGCTCCCAGGGCTTTGTGGAGTGGTCAAAAGCTCCACAACAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAACCATAGTCTTGGTAGTGTGCGTGCTTTTTTTGTTCCTGGTTTTAACGGGGATGCCTATGATGTTTCACATT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TAACTATAATGGTGGCTGTTGTTTTAAAAGTTTAATTTAATGAAATAGATGCCCTATGTCATGTTAAGGAATTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCTAGTTAAAAATCAGGAATAGGTGTTGAATATTTTCAAATGCCTTTCAAACATCCTTTGAGATGATTTTTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAATTTTTGGTGTGAGTTTTCACATACTTTATTTCCATGAAATGAAGACATCATTGATTGTAAAACATTATTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTATACCACGGAGAAAGAAAAGTGCTAATTAATCATTAAGATGCCACCAACTGGAAGATATCTCCTGACTTTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAAGATGAAAAAATGTGCAACTGAAGATCAATGAAATCTGGTACATTTCCTAACATCAAACCAACTTTGCATT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTTAAGGTTTTGGTGCACCAGTCTTTTCATACACTAGATTATATTTATTGATATTTTATGTAGGATTCTTGCCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTATCTTCACATGTGAGATTGGTGCTATCTTTGTGAAGTTTTGGTATCATGGTTAAGCTTGCATCATAGAAAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTGGGTAACTTTTACCTTTTCTATGCTTTTCAATAGTTTCTGTAGCTTAGGAAGTATCAGTCCCTTGACACCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TACATGAATTCATTGTTATAACCAGGTCATAGAGTCATGGAGAGAACGTTTCAGCTAATTCTTGGGCAGCTTTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTAGTTCTTTACAATGTTATCAGTTTATTAATACTTTTTACCTCTTGCATTTATTTTGGCGAATTACAGAGGTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTGTTTTTTTTTTTTTTTGAGACCGAGTCTCACTCTGTCACCCAGTCTGGAGTGCAGTGGCGCCATCTCGGCT 1480
Query 1 -------------------ATG----------GCCT---CCTCCCAAGTAGCTGGGATTACAGGTGCGTGCCAC 42
||| |||| ||||||||||||||||||.||||||.|| ||||
Sbjct 1481 CACTGTAAGCAGAGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGC---CCAC 1551
Query 43 CACGCTGGGCCGA------TTTTTGTGTTTTCGGTAGAGACGGGGTTTCACTGTGTTGGCCAGGCTGGTCTTGA 110
|||..| |||.| |||||||.||||..||||||||||||||||||.|||||.||||||.||||||.||
Sbjct 1552 CACCAT--GCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGA 1623
Query 111 ACTCCTGACCTCAAGTGATCCTCCCACCTTGGCCTCCCAAGGTGCTGGGATTGCAGGCGTGAGCCACCGTGCCC 184
.||||||||||| |||||||.|||.||||||||||||||.|||||||||||.|||..||||||||||||||||
Sbjct 1624 TCTCCTGACCTC--GTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGATGTGAGCCACCGTGCCC 1695
Query 185 GGCCTCAGAGTAGTTCT--------------------------------------------------------- 201
.||| ||| ||||||
Sbjct 1696 AGCC-CAG---AGTTCTTTTATCCTCTAGAAAATTCTTCATTCCATAGAGCTTTTTCATATTATTAGCTTAATT 1765
Query 202 -------------------------------------------------------------------------- 201
Sbjct 1766 ATGCATAATGTTTTATAATTAAAAATTTCTCTTTATTTTGTTCTATCCCCTGTTTCCTGTAAACTGCTGTTTGT 1839
Query 202 -------------------------------------------------------------------------- 201
Sbjct 1840 GGTTTACTCGTTATTAGATTTGTCAAAGGTTTATCTAGCTTACTATTGTTTTTCCAAAGAACCAACATTAGGAT 1913
Query 202 -------------------------------------------------------------------------- 201
Sbjct 1914 TCATTTATATCCATTATTTCTTTTATTTGTAATTTGTTTTTCTTTGATATGTATTGCATTTATTTTTTATTGTT 1987
Query 202 -------------------------------------------------------------------------- 201
Sbjct 1988 TTTCTTCTTTGTCTCAGTTTTTATACTGAATACTTGATTTATATTCTCTTTATATTTTCTATAATAGCATACTT 2061
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2062 ATTAACGCAAATGTACTTCTGGATATAGCGTTGGCCACATCTTAACATTTGATTATTCATTTTTGTTTATGTTG 2135
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2136 TCTAAAAATTACATTGTAGTGTGTCTAAATATTACATTGTAGTGTTTCTAAAGAGTGCTTTGAAACTCAGTGAT 2209
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2210 TTGGTTTATTTTTTGTTTAAAAATAGTTTTGTTTTCTTGTTTTACTGCACTGTGAACACAGAATGTGGCCTATA 2283
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2284 ACACATCTGCTTCCAAAACTTTTTAAAAAGCTTTTAGTGTGGCCTAGAACATGTCCATTTTTTGTAATTGTTTC 2357
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2358 ACGAACATTTAAGATGAAGATATCTTCTCTGTCTGTAGAACTGAAAACTTTATGTGCCTGTTAGTTAACTCAGT 2431
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2432 ATCGTCAATTATATTGTTCAGATTCATGTGTTATCTAATTTTGGCCTATTATATTCATTAAAAACCAATAAGGT 2505
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2506 TATGTGAAACTTTGTTAGTACAATTGTTTTTGCTAATAAATTTTTATAATCTTTGCTTTATGTACTCAACAGCT 2579
Query 202 -------------------------------------------------------------------------- 201
Sbjct 2580 GTGTAATTCGAGGCATATAAGTGCAGCATTGTTATGTCCTTGTTAATTAAATAATATATGTAAAACACCATATG 2653
Query 202 -------------------------------------------------- 201
Sbjct 2654 ACAATGGCTGGCAGATAGTAGGCACTCAATAAATGTTAATTAAAACCTGA 2703
